BLASTX nr result

ID: Aconitum21_contig00026081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026081
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22513.3| unnamed protein product [Vitis vinifera]              115   6e-24
ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   110   1e-22
ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...    97   2e-18
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...    95   7e-18
gb|ABN48550.1| polymerase ATREV1-630 [Arabidopsis thaliana]            90   2e-16

>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  115 bits (287), Expect = 6e-24
 Identities = 79/191 (41%), Positives = 101/191 (52%), Gaps = 4/191 (2%)
 Frame = -3

Query: 562 WVLDSVAANKLLNWAPYQLDQLVDDAHKQPKLSAFFIPKTGTTAEDAKTLANCDGNVEQG 383
           WVLDSVAANKLL+W PYQLDQL ++   QPKLSAFF  K+    EDA T      +    
Sbjct: 168 WVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVT------HTTYP 221

Query: 382 YLPKSATXXXXXXXXXXXXXXXXSDSNKDMPLSDQEKVHGVSMEEPA----EEKASVSKI 215
            +P++                  +++  + P S+ EK   + MEE +    EE+ S+   
Sbjct: 222 LVPETEDSVQSSGEIDDHQCENTNETIIEKPFSNDEKSSEIKMEEQSFSNQEEECSIKNE 281

Query: 214 PESSSHDINAGEAFKSSPCKSSRSANVRLNARDERSSPTLQIVEGSNQSHSTPGDPNFVE 35
            +SS H  +A           S S+    NAR E SS T  +V  SN+ HST  DPNFVE
Sbjct: 282 LQSSPHRPSA-----------SVSSYYLDNARKESSSTT--VVGCSNKGHSTLEDPNFVE 328

Query: 34  NYFKKSRLHFI 2
           NYFK SRLHFI
Sbjct: 329 NYFKYSRLHFI 339


>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  110 bits (276), Expect = 1e-22
 Identities = 83/207 (40%), Positives = 105/207 (50%), Gaps = 20/207 (9%)
 Frame = -3

Query: 562 WVLDSVAANKLLNWAPYQLDQLVDDAHKQPKLSAFFIPKTGTTAEDAKT------LANCD 401
           WVLDSVAANKLL+W PYQLDQL ++   QPKLSAFF  K+    EDA T      +   +
Sbjct: 168 WVLDSVAANKLLSWIPYQLDQLANETRNQPKLSAFFALKSIPVFEDAVTHTTYPLVPETE 227

Query: 400 GNVEQGYLPKSA-TXXXXXXXXXXXXXXXXSDSNK---------DMPLSDQEKVHGVSME 251
            +V +G   K A +                 D ++         + P S+ EK   + ME
Sbjct: 228 DSVFKGGTSKDAVSSEGGQYLEYTRQSSGEIDDHQCENTNETIIEKPFSNDEKSSEIKME 287

Query: 250 EPA----EEKASVSKIPESSSHDINAGEAFKSSPCKSSRSANVRLNARDERSSPTLQIVE 83
           E +    EE+ S+    +SS H  +A           S S+    NAR E SS T  +V 
Sbjct: 288 EQSFSNQEEECSIKNELQSSPHRPSA-----------SVSSYYLDNARKESSSTT--VVG 334

Query: 82  GSNQSHSTPGDPNFVENYFKKSRLHFI 2
            SN+ HST  DPNFVENYFK SRLHFI
Sbjct: 335 CSNKGHSTLEDPNFVENYFKYSRLHFI 361


>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 70/199 (35%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
 Frame = -3

Query: 562 WVLDSVAANKLLNWAPYQLDQLVDDAHKQPKLSAFFIPKTGTTAEDAKTLANC------- 404
           W+LDSVAAN+LL+W PYQLDQL   A+ QPKLSAFF  K+   +EDA T   C       
Sbjct: 157 WILDSVAANRLLSWVPYQLDQL---ANNQPKLSAFFTLKSSKMSEDAYTNDLCQVVSDIE 213

Query: 403 DGNVEQGYLPKSATXXXXXXXXXXXXXXXXSDSNKDMPLSDQEKVHGVSMEE--PAEEKA 230
           D ++  G                       ++S+  +P    E  + + MEE     E A
Sbjct: 214 DSSMRVGRSDSEDRHSSKVGDMSELSGQISTESDDTIP----ENTNAIMMEELTSVREHA 269

Query: 229 SVSKIPESSSHDINAGEAFKSSPCKSSRSANVRLNARDE---RSSPTLQIVEGSNQSHST 59
             S        ++      +  P   + S +      DE   +  P     + S Q HST
Sbjct: 270 GGSNAATKDERNVKG----ELEPAHQAPSTSFSTPCSDELNVKEYPNSSGTKPSKQCHST 325

Query: 58  PGDPNFVENYFKKSRLHFI 2
             DPNFVENYFK SRLHFI
Sbjct: 326 LADPNFVENYFKSSRLHFI 344


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 69/189 (36%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
 Frame = -3

Query: 562 WVLDSVAANKLLNWAPYQLDQLVDDAHKQPKLSAFFIPKTGTTAEDAKTLANCDGNVEQG 383
           W+LDSVAANKLL+W PYQL+QL   A+ QPKLSAFF  K    +ED   +      ++  
Sbjct: 162 WILDSVAANKLLSWVPYQLEQL---ANNQPKLSAFFCMKNKAASEDDLNIEAFQVMLDPS 218

Query: 382 YLPKSATXXXXXXXXXXXXXXXXSDSNKDMPLSDQEKVHGVSMEEPAEEKASVSKI--PE 209
               ++                  D   D P  + E+    S       K+S  +I  P 
Sbjct: 219 LKGGTSQDTNLPEVNDPVKYGKPIDGQFDYPDCEIEETSSRS------SKSSELRIEEPS 272

Query: 208 SSSHDINAGEAFKSSPCKSSRSANVRLNARDERSSPTLQIVEGSNQSHSTPGDPNFVENY 29
           ++  + N     +SSP   S             S+PT  I   SN  HST  DPNFVENY
Sbjct: 273 NTEGENNVYHELQSSPRDHS-----------IESTPTPAIARPSNPRHSTLEDPNFVENY 321

Query: 28  FKKSRLHFI 2
           FK SRLHFI
Sbjct: 322 FKSSRLHFI 330


>gb|ABN48550.1| polymerase ATREV1-630 [Arabidopsis thaliana]
          Length = 630

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
 Frame = -3

Query: 562 WVLDSVAANKLLNWAPYQLDQLVDDAHKQPKLSAFFIPKTGTTAEDAKTLANCDGNVEQG 383
           W++DS++AN+LL W PYQLDQL D    QPKLSAFF P++  T + A  + +   +    
Sbjct: 156 WIVDSISANRLLGWVPYQLDQLNDT---QPKLSAFFAPRSHLTPQMASPVTSFQPDTGYS 212

Query: 382 YLPKSATXXXXXXXXXXXXXXXXSDSNKDMPLSDQEKVHGVSMEEPAEEKASVSKIPESS 203
              + ++                 D +++      +++ GV +E    E    +   +  
Sbjct: 213 EAEEGSSIRA--------------DDSEEARDHIDDEIDGVYIENTTPELTEQTGTGDLK 258

Query: 202 SHDINA-------------GEAFKSSPCKSSRSANVRLNARDERSSPTLQIVEGSN-QSH 65
           S ++NA                 +S+    S S N  ++A  +    ++    GS+ + H
Sbjct: 259 SSEMNAEGLGNYDIEEKEVSSELQSTTNLHSTSDNKSVHANGKNGGKSIATAAGSSTRRH 318

Query: 64  STPGDPNFVENYFKKSRLHFI 2
           ST  DPNFVENYFK SRLHFI
Sbjct: 319 STLEDPNFVENYFKNSRLHFI 339


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