BLASTX nr result

ID: Aconitum21_contig00026076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00026076
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
ref|NP_197005.2| pentatricopeptide repeat-containing protein [Ar...    76   5e-12
emb|CAC01820.1| putative protein [Arabidopsis thaliana]                76   5e-12
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...    75   8e-12
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...    75   8e-12

>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 41/86 (47%), Positives = 54/86 (62%)
 Frame = +2

Query: 377 IMGIFSDAAGDMGKAKRWLSKCKVTPTPELVAEVLSRSRKRRDWEAAHVFFGWAGKRKGC 556
           I+ I  +      + K+ L  C +  +PELV EVLSR+R   DWEAA  FF WAGK+ G 
Sbjct: 131 ILAIMHEVGSGPSQIKQKLEHCSIVLSPELVVEVLSRTRN--DWEAAFTFFLWAGKQPG- 187

Query: 557 RYRHSVGEYNLMISTMGEMKRFDEVW 634
            Y HSV EY+ MIS +G+M++FD  W
Sbjct: 188 -YAHSVREYHSMISILGKMRKFDTAW 212


>ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15010, mitochondrial; Flags: Precursor
           gi|332004721|gb|AED92104.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 572

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 39/87 (44%), Positives = 53/87 (60%)
 Frame = +2

Query: 374 RIMGIFSDAAGDMGKAKRWLSKCKVTPTPELVAEVLSRSRKRRDWEAAHVFFGWAGKRKG 553
           +I  +  D   D  + +  L +C V P+ ELV E+LSR R   DWE A  FF WAGK++G
Sbjct: 99  KISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRN--DWETAFTFFVWAGKQQG 156

Query: 554 CRYRHSVGEYNLMISTMGEMKRFDEVW 634
             Y  SV EY+ MIS +G+M++FD  W
Sbjct: 157 --YVRSVREYHSMISILGKMRKFDTAW 181


>emb|CAC01820.1| putative protein [Arabidopsis thaliana]
          Length = 532

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 39/87 (44%), Positives = 53/87 (60%)
 Frame = +2

Query: 374 RIMGIFSDAAGDMGKAKRWLSKCKVTPTPELVAEVLSRSRKRRDWEAAHVFFGWAGKRKG 553
           +I  +  D   D  + +  L +C V P+ ELV E+LSR R   DWE A  FF WAGK++G
Sbjct: 59  KISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRN--DWETAFTFFVWAGKQQG 116

Query: 554 CRYRHSVGEYNLMISTMGEMKRFDEVW 634
             Y  SV EY+ MIS +G+M++FD  W
Sbjct: 117 --YVRSVREYHSMISILGKMRKFDTAW 141


>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499595|gb|AES80798.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 40/71 (56%), Positives = 47/71 (66%)
 Frame = +2

Query: 422 KRWLSKCKVTPTPELVAEVLSRSRKRRDWEAAHVFFGWAGKRKGCRYRHSVGEYNLMIST 601
           K+ L  C V  + ELV EVLSR R   DWEAA  FF WAGK+ G  Y HSV EY+ MIS 
Sbjct: 119 KQKLEDCNVKASSELVVEVLSRVRN--DWEAAFTFFLWAGKQPG--YDHSVREYHSMISV 174

Query: 602 MGEMKRFDEVW 634
           +G+M+RFD  W
Sbjct: 175 LGKMRRFDTAW 185


>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 41/86 (47%), Positives = 53/86 (61%)
 Frame = +2

Query: 377 IMGIFSDAAGDMGKAKRWLSKCKVTPTPELVAEVLSRSRKRRDWEAAHVFFGWAGKRKGC 556
           IM I    +G+  + K  +  C V  + ELV EVLSR R   DWEAA  FF WAG++ G 
Sbjct: 100 IMSILHQLSGNPVEMKNKIEHCGVKVSRELVLEVLSRIRN--DWEAAFTFFLWAGRQLG- 156

Query: 557 RYRHSVGEYNLMISTMGEMKRFDEVW 634
            Y HSV EY+ MIS +G+M++FD  W
Sbjct: 157 -YSHSVREYHAMISILGKMRKFDTAW 181