BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025860
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD39863.2| OSJNBa0036B17.4 [Oryza sativa Japonica Group]          62   5e-08
gb|ABA99509.1| retrotransposon protein, putative, Ty3-gypsy subc...    61   1e-07
gb|AAX96554.1| retrotransposon protein, putative, Ty3-gypsy sub-...    60   1e-07
dbj|BAB19768.1| putative gypsy-type retrotransposon RIRE2 [Oryza...    60   1e-07
gb|ABF96555.1| retrotransposon protein, putative, Ty3-gypsy subc...    60   1e-07

>emb|CAD39863.2| OSJNBa0036B17.4 [Oryza sativa Japonica Group]
          Length = 609

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 4/123 (3%)
 Frame = +1

Query: 22  CKAFANTMPAR----ALNWFAKQSPGSINTWSDLKRKFLCEFGAAGAIPIDRHNLCNIGQ 189
           CKA AN +P      A +W      G+I +W++L   F+  F      P    +L N+ Q
Sbjct: 299 CKAMANYLPVSLADSARSWLHGLPHGTIGSWAELHDHFIANFQGTFERPGTHFDLYNVIQ 358

Query: 190 SYAELTGNYMSRFKKVLKQIYDLFDQEMTMCFKSGLSSSALKTVFGLRPPANQGEMFLKA 369
            + E   +Y+ RF +   +I D+ D  +   F  G+    L   FG +PP    +MF KA
Sbjct: 359 KFRESLRDYIRRFSEQRNKISDITDNVIIAAFTKGIRHEDLVDKFGRKPPKTVKQMFEKA 418

Query: 370 QHF 378
             +
Sbjct: 419 NKY 421


>gb|ABA99509.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 2003

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
 Frame = +1

Query: 25   KAFANTMPAR----ALNWFAKQSPGSINTWSDLKRKFLCEFGAAGAIPIDRHNLCNIGQS 192
            KA AN +P      A +W      G+I +W++L+  F+  F      P    +L NI Q 
Sbjct: 890  KAMANYLPVALADSAWSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTHFDLYNIVQK 949

Query: 193  YAELTGNYMSRFKKVLKQIYDLFDQEMTMCFKSGLSSSALKTVFGLRPPANQGEMFLKAQ 372
              E   +Y+ RF +   +I D+ D  +T  F  G+    L   FG +PP    +MF KA 
Sbjct: 950  SREFLRDYIRRFSEQRNKISDITDDVITAAFTKGILHEDLVGKFGHKPPKTVKQMFEKAN 1009

Query: 373  HF 378
             +
Sbjct: 1010 EY 1011


>gb|AAX96554.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
           sativa Japonica Group] gi|77550443|gb|ABA93240.1|
           retrotransposon protein, putative, Ty3-gypsy subclass
           [Oryza sativa Japonica Group]
          Length = 1701

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
 Frame = +1

Query: 25  KAFANTMPAR----ALNWFAKQSPGSINTWSDLKRKFLCEFGAAGAIPIDRHNLCNIGQS 192
           KA AN +P      A +W      G+I +W++L+  F+  F      P  + +L N+ Q 
Sbjct: 393 KAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFECPGTQFDLYNVIQK 452

Query: 193 YAELTGNYMSRFKKVLKQIYDLFDQEMTMCFKSGLSSSALKTVFGLRPPANQGEMFLKAQ 372
             E  G+Y+ RF +   +I D+ D  +   F  G+    L   FG +PP     MF KA 
Sbjct: 453 SRESLGDYIRRFSEQRNKISDITDDVIIAAFTKGIRHEELVGKFGRKPPKTVKLMFEKAN 512

Query: 373 HF 378
            +
Sbjct: 513 EY 514


>dbj|BAB19768.1| putative gypsy-type retrotransposon RIRE2 [Oryza sativa Japonica
           Group]
          Length = 983

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 4/122 (3%)
 Frame = +1

Query: 25  KAFANTMPAR----ALNWFAKQSPGSINTWSDLKRKFLCEFGAAGAIPIDRHNLCNIGQS 192
           KA AN +P      A +W      G+I +W++L+  F+  F      P  + +L N+ Q 
Sbjct: 471 KAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTQFDLYNVVQK 530

Query: 193 YAELTGNYMSRFKKVLKQIYDLFDQEMTMCFKSGLSSSALKTVFGLRPPANQGEMFLKAQ 372
             E   +Y+ RF K   +I D+ D  +   F  G+    L   FG +PP    +MF KA 
Sbjct: 531 SGESLRDYIRRFSKQRNKISDITDDVIIAAFTKGIRHEDLVGKFGRKPPKTVKQMFEKAN 590

Query: 373 HF 378
            +
Sbjct: 591 EY 592


>gb|ABF96555.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1659

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
 Frame = +1

Query: 25  KAFANTMPAR----ALNWFAKQSPGSINTWSDLKRKFLCEFGAAGAIPIDRHNLCNIGQS 192
           KA AN +P      A +W      G+I +W++L+  F+  F      P    +L NI Q 
Sbjct: 382 KAMANYLPVALADSARSWLHGLPRGTIGSWAELRDHFIANFQGTFERPGTHFDLYNIVQK 441

Query: 193 YAELTGNYMSRFKKVLKQIYDLFDQEMTMCFKSGLSSSALKTVFGLRPPANQGEMFLKAQ 372
             E   +Y+ RF K   +I D+ D  +   F  G+    L   FG +PP    +MF KA 
Sbjct: 442 SGESLRDYIRRFSKQRNKISDITDDVIIAAFTKGIRHEDLVGKFGRKPPKTVKQMFEKAN 501

Query: 373 HF 378
            +
Sbjct: 502 EY 503