BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025842
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
emb|CBI35069.3| unnamed protein product [Vitis vinifera]              187   1e-45
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   187   1e-45
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   183   1e-44
ref|NP_199327.4| DNA-directed RNA polymerase III subunit C2 [Ara...   181   7e-44

>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
           predicted protein [Populus trichocarpa]
          Length = 1141

 Score =  188 bits (477), Expect = 4e-46
 Identities = 92/141 (65%), Positives = 112/141 (79%)
 Frame = -2

Query: 425 DDKQFLASPVSSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANHEVRSVLD 246
           D ++  A+PV SAVDKFQLLPEFLK RGLVKQHLDSFNYF+N GIKKIVRAN  + S +D
Sbjct: 5   DKQKHAAAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTVD 64

Query: 245 PSCFLRYTGVRIGEPSFSLDGITESLTPHTCRLSDRTYAAPIFVDIVYSTGGVHGNREHA 66
           PS +LR+T V+IG+PS  +D I+E +TPH CRLSD TYAAPI V+I Y +G  HG +E  
Sbjct: 65  PSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPILVNIEYISGS-HGRKEKM 123

Query: 65  SKSKVMIGRLPVMLRSCKCVL 3
            K+ V+IGR+P+MLRSC CVL
Sbjct: 124 IKNDVVIGRMPIMLRSCCCVL 144


>emb|CBI35069.3| unnamed protein product [Vitis vinifera]
          Length = 1309

 Score =  187 bits (474), Expect = 1e-45
 Identities = 94/139 (67%), Positives = 107/139 (76%)
 Frame = -2

Query: 419 KQFLASPVSSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANHEVRSVLDPS 240
           K F A PV  AVDKF LLPEFLKVRGLVKQHLDSFNYFV T IKKIVRAN  + S +DPS
Sbjct: 26  KHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSVDPS 85

Query: 239 CFLRYTGVRIGEPSFSLDGITESLTPHTCRLSDRTYAAPIFVDIVYSTGGVHGNREHASK 60
            +LR+  VRIGEPS ++DGI+E L PHTCRLSD TYAAPI V+I Y TG  H  +    K
Sbjct: 86  IYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGS-HVQKTRVEK 144

Query: 59  SKVMIGRLPVMLRSCKCVL 3
           + V+IGR+P+MLRSC CVL
Sbjct: 145 NDVVIGRMPIMLRSCCCVL 163


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
           vinifera]
          Length = 1142

 Score =  187 bits (474), Expect = 1e-45
 Identities = 94/139 (67%), Positives = 107/139 (76%)
 Frame = -2

Query: 419 KQFLASPVSSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANHEVRSVLDPS 240
           K F A PV  AVDKF LLPEFLKVRGLVKQHLDSFNYFV T IKKIVRAN  + S +DPS
Sbjct: 8   KHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVSSVDPS 67

Query: 239 CFLRYTGVRIGEPSFSLDGITESLTPHTCRLSDRTYAAPIFVDIVYSTGGVHGNREHASK 60
            +LR+  VRIGEPS ++DGI+E L PHTCRLSD TYAAPI V+I Y TG  H  +    K
Sbjct: 68  IYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGS-HVQKTRVEK 126

Query: 59  SKVMIGRLPVMLRSCKCVL 3
           + V+IGR+P+MLRSC CVL
Sbjct: 127 NDVVIGRMPIMLRSCCCVL 145


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
           communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
           polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/140 (64%), Positives = 108/140 (77%)
 Frame = -2

Query: 422 DKQFLASPVSSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANHEVRSVLDP 243
           DKQ L +P+ SAVDKFQLLPEFLKVRGLVKQHLDSFNYFVN GIKKIVRAN  + S +DP
Sbjct: 23  DKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSTVDP 82

Query: 242 SCFLRYTGVRIGEPSFSLDGITESLTPHTCRLSDRTYAAPIFVDIVYSTGGVHGNREHAS 63
             +LR+  VRIG PS  +DG++E L+PH CRLSD+TYAAPI V++ Y  G  H  +    
Sbjct: 83  GIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGS-HDQKTRVE 141

Query: 62  KSKVMIGRLPVMLRSCKCVL 3
           K+ V+IGR+P+MLRS  CVL
Sbjct: 142 KNDVVIGRMPIMLRSRSCVL 161


>ref|NP_199327.4| DNA-directed RNA polymerase III subunit C2 [Arabidopsis thaliana]
           gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase
           III subunit C2 [Arabidopsis thaliana]
          Length = 1161

 Score =  181 bits (458), Expect = 7e-44
 Identities = 85/140 (60%), Positives = 108/140 (77%)
 Frame = -2

Query: 422 DKQFLASPVSSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTGIKKIVRANHEVRSVLDP 243
           DK+ L++P+ S  DKFQL+PEFLKVRGLVKQHLDSFNYF+N GI KIV+AN  + S +DP
Sbjct: 18  DKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSRITSTVDP 77

Query: 242 SCFLRYTGVRIGEPSFSLDGITESLTPHTCRLSDRTYAAPIFVDIVYSTGGVHGNREHAS 63
           S +LR+  VR+GEPS       E++ PH CRL+D TYAAPIFV+I Y   G HGN+  ++
Sbjct: 78  SIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEY-VHGSHGNKAKSA 136

Query: 62  KSKVMIGRLPVMLRSCKCVL 3
           K  V+IGR+P+MLRSC+CVL
Sbjct: 137 KDNVIIGRMPIMLRSCRCVL 156