BLASTX nr result

ID: Aconitum21_contig00025678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025678
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containi...   237   7e-61
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   230   1e-58
emb|CBI28530.3| unnamed protein product [Vitis vinifera]              230   1e-58
ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago t...   225   3e-57
ref|XP_002514722.1| pentatricopeptide repeat-containing protein,...   225   3e-57

>ref|XP_003550790.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
           mitochondrial-like [Glycine max]
          Length = 451

 Score =  237 bits (605), Expect = 7e-61
 Identities = 111/173 (64%), Positives = 139/173 (80%)
 Frame = -2

Query: 520 KNPGCELKDENFNHAVRVFAEKKDAVALEIMVSRFRKEQRVMEIETFSLVAEALVKLGRE 341
           KN    L+D+++NHA+RVFAEKKD  A++I++   +KE R M+ ETFSLVAE LVKLG+E
Sbjct: 65  KNLSHRLEDKDYNHALRVFAEKKDYTAMDILMGDLKKEGRAMDAETFSLVAENLVKLGKE 124

Query: 340 DEAVGIFKNLDKFKCAIDSTTVSAIIQALCAKGHAKKAEGVVWHHRSKISGVESCIYKSL 161
           DEA+GIFKNLDK+KC+ID  TV+AI+ ALC+KGH K+AEGVVWHH  KI+G + CIY+SL
Sbjct: 125 DEALGIFKNLDKYKCSIDEFTVTAIVNALCSKGHGKRAEGVVWHHNDKITGTKPCIYRSL 184

Query: 160 LHGWCVHGNVKEARRILSEMKNFEIQLDTYCYNELLRCLCKRNLKFNPSGLVP 2
           L+GW V  NVKEARRI+ EMK+  +  D  CYN  LRCLC+RNL+ NPSGLVP
Sbjct: 185 LYGWSVQRNVKEARRIIKEMKSNGVIPDLLCYNTFLRCLCERNLRHNPSGLVP 237


>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61370, mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  230 bits (586), Expect = 1e-58
 Identities = 108/173 (62%), Positives = 137/173 (79%)
 Frame = -2

Query: 520 KNPGCELKDENFNHAVRVFAEKKDAVALEIMVSRFRKEQRVMEIETFSLVAEALVKLGRE 341
           K   C+L+D++FN+A++VFAEKKD  A++I+VS    E R M+ +TF +VAE LV LGRE
Sbjct: 98  KKFNCKLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREMKAQTFGIVAETLVSLGRE 157

Query: 340 DEAVGIFKNLDKFKCAIDSTTVSAIIQALCAKGHAKKAEGVVWHHRSKISGVESCIYKSL 161
           D+A+G+FKNLDKFKC+ DS TV+AI+ ALC+KGHA++AEGVV HH+ KI GV+ CIY+SL
Sbjct: 158 DDALGLFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEGVVRHHKDKILGVKPCIYRSL 217

Query: 160 LHGWCVHGNVKEARRILSEMKNFEIQLDTYCYNELLRCLCKRNLKFNPSGLVP 2
            +GW    NVKEARRIL EMK+  I  D +CYN  LRCLC+RNLK NPSGLVP
Sbjct: 218 FYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLCERNLKSNPSGLVP 270


>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  230 bits (586), Expect = 1e-58
 Identities = 108/173 (62%), Positives = 137/173 (79%)
 Frame = -2

Query: 520 KNPGCELKDENFNHAVRVFAEKKDAVALEIMVSRFRKEQRVMEIETFSLVAEALVKLGRE 341
           K   C+L+D++FN+A++VFAEKKD  A++I+VS    E R M+ +TF +VAE LV LGRE
Sbjct: 67  KKFNCKLEDDDFNYAIQVFAEKKDLKAIDILVSDLSNEGREMKAQTFGIVAETLVSLGRE 126

Query: 340 DEAVGIFKNLDKFKCAIDSTTVSAIIQALCAKGHAKKAEGVVWHHRSKISGVESCIYKSL 161
           D+A+G+FKNLDKFKC+ DS TV+AI+ ALC+KGHA++AEGVV HH+ KI GV+ CIY+SL
Sbjct: 127 DDALGLFKNLDKFKCSYDSVTVTAIVNALCSKGHARRAEGVVRHHKDKILGVKPCIYRSL 186

Query: 160 LHGWCVHGNVKEARRILSEMKNFEIQLDTYCYNELLRCLCKRNLKFNPSGLVP 2
            +GW    NVKEARRIL EMK+  I  D +CYN  LRCLC+RNLK NPSGLVP
Sbjct: 187 FYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLCERNLKSNPSGLVP 239


>ref|XP_003622167.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355497182|gb|AES78385.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 563

 Score =  225 bits (574), Expect = 3e-57
 Identities = 104/172 (60%), Positives = 135/172 (78%)
 Frame = -2

Query: 520 KNPGCELKDENFNHAVRVFAEKKDAVALEIMVSRFRKEQRVMEIETFSLVAEALVKLGRE 341
           KN   +L+D+++N+A+RVF EKKD  A++I++  F+K+ RVME +TF +VAE  VKLG+E
Sbjct: 172 KNLSNDLEDKDYNYALRVFIEKKDYTAMDILLGDFKKQGRVMEAQTFGVVAETYVKLGKE 231

Query: 340 DEAVGIFKNLDKFKCAIDSTTVSAIIQALCAKGHAKKAEGVVWHHRSKISGVESCIYKSL 161
           DEA+GIFKNLDK+KC ID  TV+AII ALC+KGHAK+AEGV WHH+ KI G   C+Y+SL
Sbjct: 232 DEALGIFKNLDKYKCLIDEFTVTAIINALCSKGHAKRAEGVAWHHKDKIKGALPCVYRSL 291

Query: 160 LHGWCVHGNVKEARRILSEMKNFEIQLDTYCYNELLRCLCKRNLKFNPSGLV 5
           L+GW +  NVKE+RRI+ EMK   +  D  CYN  LRCLC+RNL+ NPSGLV
Sbjct: 292 LYGWSLERNVKESRRIIQEMKTNGVTPDLVCYNTFLRCLCERNLRNNPSGLV 343


>ref|XP_002514722.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546326|gb|EEF47828.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 479

 Score =  225 bits (573), Expect = 3e-57
 Identities = 110/168 (65%), Positives = 134/168 (79%), Gaps = 1/168 (0%)
 Frame = -2

Query: 502 LKDENFNHAVRVFAEKKDAVALEIMVSRFRKEQRVMEIETFSLVAEALVKLGREDEAVGI 323
           +KDE+FNHA+RV AEKKD  A++I++S  RKE RVME +TF LVAEALVKLGREDEA+GI
Sbjct: 89  MKDEDFNHAIRVLAEKKDHTAMQILISDLRKEGRVMEPQTFGLVAEALVKLGREDEALGI 148

Query: 322 FKNLDKFKCAIDSTTVSAIIQALCAKGHAKKAEGVVWHHRSKISGV-ESCIYKSLLHGWC 146
           FKNLDKFKC  D  TV+AII ALCA+GHAKKA GVV HH+ K+S V   CIY+SL++GW 
Sbjct: 149 FKNLDKFKCPQDCETVTAIITALCAEGHAKKAYGVVLHHKDKLSEVIRPCIYRSLIYGWS 208

Query: 145 VHGNVKEARRILSEMKNFEIQLDTYCYNELLRCLCKRNLKFNPSGLVP 2
           +  NVK AR ++ EMK   I+ D +CYN  LRCLC+RN++ NPSGLVP
Sbjct: 209 MQKNVKRAREVIQEMKRNGIKPDLFCYNTFLRCLCERNVERNPSGLVP 256


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