BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025570
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc...   116   2e-24
gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subc...   114   6e-24
gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Ho...   114   6e-24
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop...   114   6e-24
gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subc...   114   6e-24

>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 932

 Score =  116 bits (290), Expect = 2e-24
 Identities = 59/118 (50%), Positives = 82/118 (69%)
 Frame = -3

Query: 355 NNEETIQEVAKALQSEFDMTDLGELNYFLGLEIKYLSHGGLFLSQSSYAKDVLEKAGMES 176
           ++ E +  + K L+ +F + DLG+L+YFLG+E+K +S G L LSQ+ YA D+L++AGM  
Sbjct: 628 SSAEVVAALLKDLEKDFALKDLGDLHYFLGIEVKKVSQG-LVLSQAWYASDILKRAGMSI 686

Query: 175 CNPAVTPSQTGVKLVIDDQHVLEGSDITLYRSLVGCLQYLTFTRPDITYSVNCVCQFL 2
           C PA TP  T  KL I+D   L  +D + YRS+VG LQYLT TR D+++ VN VCQFL
Sbjct: 687 CKPASTPLSTTEKLSIEDGDFLGQNDASHYRSIVGALQYLTLTRSDLSFLVNKVCQFL 744


>gb|ABA97652.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1145

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/118 (47%), Positives = 78/118 (66%)
 Frame = -3

Query: 355  NNEETIQEVAKALQSEFDMTDLGELNYFLGLEIKYLSHGGLFLSQSSYAKDVLEKAGMES 176
            ++E     + + L+ EF + DLGEL+YFLG+E+  + H G+ L+Q  YA D+L+K GM +
Sbjct: 957  SSERGTMALLQDLKEEFALKDLGELHYFLGIEVSKV-HNGIVLTQDKYATDLLKKVGMMN 1015

Query: 175  CNPAVTPSQTGVKLVIDDQHVLEGSDITLYRSLVGCLQYLTFTRPDITYSVNCVCQFL 2
            C P  TP     KL + +  +L  +D T +RS+VG LQYLT TRPDI +SVN VCQFL
Sbjct: 1016 CKPVTTPMSVSEKLSVHEGSLLGPNDATQFRSIVGALQYLTLTRPDIAFSVNKVCQFL 1073


>gb|AAM18766.1|AC099325_22 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
            sativa Japonica Group]
          Length = 1150

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = -3

Query: 355  NNEETIQEVAKALQSEFDMTDLGELNY-FLGLEIKYLSHGGLFLSQSSYAKDVLEKAGME 179
            ++++ +  +   L+ +F + DLG+LNY FLG+E+K +S G L LSQ  Y  D+L++ GM 
Sbjct: 757  SSQDAVSSLLHNLKMDFALKDLGDLNYYFLGIEVKKISDG-LVLSQDKYTHDILKRIGMS 815

Query: 178  SCNPAVTPSQTGVKLVIDDQHVLEGSDITLYRSLVGCLQYLTFTRPDITYSVNCVCQFL 2
            +C PA TP  T  KL + +  +L   D T YRS+VG LQYLT TRPDI +S+N VCQFL
Sbjct: 816  TCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFL 874


>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
          Length = 1313

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/106 (54%), Positives = 70/106 (66%)
 Frame = -3

Query: 319  LQSEFDMTDLGELNYFLGLEIKYLSHGGLFLSQSSYAKDVLEKAGMESCNPAVTPSQTGV 140
            L  EF + DLG+LNYFLG+E+  +   G+ L+Q  YA D+L+K GM  C P  TP  T  
Sbjct: 1019 LNKEFALKDLGDLNYFLGIEVNKV-RDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSE 1077

Query: 139  KLVIDDQHVLEGSDITLYRSLVGCLQYLTFTRPDITYSVNCVCQFL 2
            KL I +   L   DIT YRS+VG LQYLT TRPDI +SVN VCQFL
Sbjct: 1078 KLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQFL 1123


>gb|ABB47033.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  114 bits (286), Expect = 6e-24
 Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 1/119 (0%)
 Frame = -3

Query: 355  NNEETIQEVAKALQSEFDMTDLGELNY-FLGLEIKYLSHGGLFLSQSSYAKDVLEKAGME 179
            ++++ +  +   L+ +F + DLG+LNY FLG+E+K +S G L LSQ  Y  D+L++ GM 
Sbjct: 719  SSQDAVSSLLHNLKMDFALKDLGDLNYYFLGIEVKKISDG-LVLSQDKYTHDILKRIGMS 777

Query: 178  SCNPAVTPSQTGVKLVIDDQHVLEGSDITLYRSLVGCLQYLTFTRPDITYSVNCVCQFL 2
            +C PA TP  T  KL + +  +L   D T YRS+VG LQYLT TRPDI +S+N VCQFL
Sbjct: 778  TCKPAPTPLSTSEKLSVQEGSLLGPGDATNYRSIVGALQYLTLTRPDIAFSINKVCQFL 836