BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025540
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   105   4e-21
emb|CBI27235.3| unnamed protein product [Vitis vinifera]              105   4e-21
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   102   4e-20
ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containi...    94   9e-18
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t...    88   6e-16

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/99 (56%), Positives = 68/99 (68%), Gaps = 4/99 (4%)
 Frame = +2

Query: 101 PTFPKQHHNPPSLTLKTPP----PQPPNSQWLETLRSRTRSGLFQEAISLYIQMVISGTP 268
           P+  K   +P  LT KTPP    P    + W++ LRSRTRS  F+EAIS YI+M +SG  
Sbjct: 32  PSIQKPTASP--LTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGAR 89

Query: 269 PDNFAFPAVLKAVSALHDLNCGKQLHASIIKLGYHSSSV 385
           PDNFAFPAVLKAVS L DL  G+Q+HA+ +K GY SSSV
Sbjct: 90  PDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSV 128


>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/99 (56%), Positives = 68/99 (68%), Gaps = 4/99 (4%)
 Frame = +2

Query: 101 PTFPKQHHNPPSLTLKTPP----PQPPNSQWLETLRSRTRSGLFQEAISLYIQMVISGTP 268
           P+  K   +P  LT KTPP    P    + W++ LRSRTRS  F+EAIS YI+M +SG  
Sbjct: 32  PSIQKPTASP--LTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGAR 89

Query: 269 PDNFAFPAVLKAVSALHDLNCGKQLHASIIKLGYHSSSV 385
           PDNFAFPAVLKAVS L DL  G+Q+HA+ +K GY SSSV
Sbjct: 90  PDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSV 128


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/94 (52%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
 Frame = +2

Query: 119 HHNPPSLTLKTPPPQP-----PNSQWLETLRSRTRSGLFQEAISLYIQMVISGTPPDNFA 283
           H  P    L   PP+P       + W+E+LR  TRS LF+EAIS Y+ M++SG  PD++A
Sbjct: 20  HELPTKKFLSHSPPKPISQSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYA 79

Query: 284 FPAVLKAVSALHDLNCGKQLHASIIKLGYHSSSV 385
           FP VLKAV+ L DLN GKQ+HA ++K GY SSSV
Sbjct: 80  FPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSV 113


>ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 1135

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 4/86 (4%)
 Frame = +2

Query: 125 NPPSLTLKTPPPQPPN----SQWLETLRSRTRSGLFQEAISLYIQMVISGTPPDNFAFPA 292
           +P +LTL TPPP        SQW++ LRS+T S  F++AIS Y  M+ +  PPDNFAFPA
Sbjct: 276 HPLTLTLPTPPPTTVERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPA 335

Query: 293 VLKAVSALHDLNCGKQLHASIIKLGY 370
           VLKA +A+HDL  GKQ+HA + K G+
Sbjct: 336 VLKAAAAVHDLCLGKQIHAHVFKFGH 361


>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 874

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/99 (47%), Positives = 60/99 (60%), Gaps = 13/99 (13%)
 Frame = +2

Query: 110 PKQHHNPPS------------LTLKTPPPQPPNSQWLETLRSRTRSG-LFQEAISLYIQM 250
           P +HH+PP+             T+   P  P  S+W+  LRS+T+S   F +AIS Y  M
Sbjct: 19  PNKHHSPPTSSSAITTTTTTTTTVAAEPRLP--SEWVSHLRSQTQSSSTFHQAISTYTNM 76

Query: 251 VISGTPPDNFAFPAVLKAVSALHDLNCGKQLHASIIKLG 367
           V +G PPDNFAFPAVLKA + + DLN GKQLHA + K G
Sbjct: 77  VTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFG 115