BLASTX nr result

ID: Aconitum21_contig00025529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025529
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    69   2e-09
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    60   8e-07
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    58   2e-06
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = -3

Query: 680 HFCDDHD-SIWAEWIRRYYIRGKYFWNMTINSNASGVWKNILDVMDHIKEYIVYAIEDGK 504
           + C+D D SIW+ WIR   +RG+ FW +    N S  W  IL +       + Y I DG 
Sbjct: 180 NLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGM 239

Query: 503 TISLWLDTWLKHTPLIQSGG 444
           T SLW D W  H+PL  S G
Sbjct: 240 TTSLWFDNWHPHSPLADSYG 259



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
 Frame = -2

Query: 237 KHLQSHNQKVEWRHLVWNR---PKHSFIAWQSFAGATPTMNMLQTKGLIQNSCCVLSKRH 67
           + L+ H Q VEW  +VW +   P+HSF+ W +      T + L   G+   + C L  R+
Sbjct: 331 EQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCLRN 390

Query: 66  PESCIHLWFQCSYSKLIW 13
            E   HL+F+CSY+K IW
Sbjct: 391 NEDHNHLFFECSYTKAIW 408


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
 Frame = -2

Query: 252  LVKII-KHLQSHNQKVEWRHLVWNR---PKHSFIAWQSFAGATPTMNMLQTKGLIQNSCC 85
            LVK+  +HL+ H Q VEW  +VW +   P+HSF+ W +      T + L   G+   + C
Sbjct: 1198 LVKVAWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRC 1257

Query: 84   VLSKRHPESCIHLWFQCSYSKLIW 13
             L  R+ E   HL+F+CSY+K IW
Sbjct: 1258 SLCLRNNEDHNHLFFECSYTKAIW 1281


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
 Frame = -2

Query: 237  KHLQSHNQKVEWRHLVWNR---PKHSFIAWQSFAGATPTMNMLQTKGLIQNSCCVLSKRH 67
            + L+ H Q VEW  +VW +   P+HSF+ W        T + L   G+   + C L  R+
Sbjct: 864  EQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN 923

Query: 66   PESCIHLWFQCSYSKLIW 13
             E   HL+F+CSY+K IW
Sbjct: 924  NEDHNHLFFECSYTKAIW 941


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 25/69 (36%), Positives = 35/69 (50%)
 Frame = -3

Query: 662 DSIWAEWIRRYYIRGKYFWNMTINSNASGVWKNILDVMDHIKEYIVYAIEDGKTISLWLD 483
           DS+W +WIR Y ++   FW+    S  S +WK +L   D  K +    I +G+T S W D
Sbjct: 417 DSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDTAKAFSKVDIRNGETASFWYD 476

Query: 482 TWLKHTPLI 456
            W     LI
Sbjct: 477 DWSSKGRLI 485


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -2

Query: 237 KHLQSHNQKVEWRHLVWNR---PKHSFIAWQSFAGATPTMNMLQTKGLIQNSCCVLSKRH 67
           + L+ H   VEW  +VW +   P+HSF+ W        T + L   G+   + C L  R+
Sbjct: 149 EQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCLRN 208

Query: 66  PESCIHLWFQCSYSKLIW 13
            E   HL+F+CSY+K IW
Sbjct: 209 NEDHNHLFFECSYTKAIW 226


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