BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025497
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   131   9e-29
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   131   9e-29
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               129   3e-28
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...   126   3e-27
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...   126   3e-27

>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  131 bits (329), Expect = 9e-29
 Identities = 60/155 (38%), Positives = 96/155 (61%)
 Frame = +1

Query: 94   IKGINVAKSAPSTTHLFFADDSILFCNANLQNLDTIKFILNIYKSCSRQQVNLSKSSTFF 273
            ++G+ +   AP+ THL FADDS+ FC AN++N   +K + ++Y+  S Q++N+ KS   F
Sbjct: 820  LRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITF 879

Query: 274  SPNCCENIRNLAFDCFHIPKQNKFGKYLGLESDFGLSKKKIFENLKNKVKTKISSWSNHF 453
                  + ++       IP Q   GKYLGL   FG  KK++FE + ++VK + S+WS  F
Sbjct: 880  GSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARF 939

Query: 454  LNHAGRETLIKAVLEALPTYTMSCFYIPINVLEDI 558
            L+ AG+E ++K+V  A+P Y MSCF +P  ++ +I
Sbjct: 940  LSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEI 974


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  131 bits (329), Expect = 9e-29
 Identities = 60/155 (38%), Positives = 96/155 (61%)
 Frame = +1

Query: 94   IKGINVAKSAPSTTHLFFADDSILFCNANLQNLDTIKFILNIYKSCSRQQVNLSKSSTFF 273
            ++G+ +   AP+ THL FADDS+ FC AN++N   +K + ++Y+  S Q++N+ KS   F
Sbjct: 1046 LRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITF 1105

Query: 274  SPNCCENIRNLAFDCFHIPKQNKFGKYLGLESDFGLSKKKIFENLKNKVKTKISSWSNHF 453
                  + ++       IP Q   GKYLGL   FG  KK++FE + ++VK + S+WS  F
Sbjct: 1106 GSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARF 1165

Query: 454  LNHAGRETLIKAVLEALPTYTMSCFYIPINVLEDI 558
            L+ AG+E ++K+V  A+P Y MSCF +P  ++ +I
Sbjct: 1166 LSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEI 1200


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  129 bits (325), Expect = 3e-28
 Identities = 61/155 (39%), Positives = 95/155 (61%)
 Frame = +1

Query: 94  IKGINVAKSAPSTTHLFFADDSILFCNANLQNLDTIKFILNIYKSCSRQQVNLSKSSTFF 273
           I+G+ +   AP+ THL FADDS+ FC AN++N   +K + ++Y+  S Q++N+ KS   F
Sbjct: 285 IRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITF 344

Query: 274 SPNCCENIRNLAFDCFHIPKQNKFGKYLGLESDFGLSKKKIFENLKNKVKTKISSWSNHF 453
                 + +       +IP Q   GKYLGL   FG  KK++F  + ++VK + +SWS  F
Sbjct: 345 GSRVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKF 404

Query: 454 LNHAGRETLIKAVLEALPTYTMSCFYIPINVLEDI 558
           L+ AG+E L+K+V  A+P Y MSCF +P  ++ +I
Sbjct: 405 LSPAGKEILLKSVALAMPVYAMSCFKLPQGIVSEI 439


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score =  126 bits (316), Expect = 3e-27
 Identities = 58/155 (37%), Positives = 92/155 (59%)
 Frame = +1

Query: 94   IKGINVAKSAPSTTHLFFADDSILFCNANLQNLDTIKFILNIYKSCSRQQVNLSKSSTFF 273
            I+GI +    P  THL FADDS+ FC +N++N   +K + ++Y+  S Q++N+SKS   F
Sbjct: 1046 IRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITF 1105

Query: 274  SPNCCENIRNLAFDCFHIPKQNKFGKYLGLESDFGLSKKKIFENLKNKVKTKISSWSNHF 453
                    +N   +   I      GKYLGL   FG  K+ +F  +  +VK + SSWS  +
Sbjct: 1106 GSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKY 1165

Query: 454  LNHAGRETLIKAVLEALPTYTMSCFYIPINVLEDI 558
            L+ AG+E ++K+V  ++P Y MSCF +P+N++ +I
Sbjct: 1166 LSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEI 1200


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score =  126 bits (316), Expect = 3e-27
 Identities = 58/155 (37%), Positives = 92/155 (59%)
 Frame = +1

Query: 94   IKGINVAKSAPSTTHLFFADDSILFCNANLQNLDTIKFILNIYKSCSRQQVNLSKSSTFF 273
            I+GI +    P  THL FADDS+ FC +N++N   +K + ++Y+  S Q++N+SKS   F
Sbjct: 1026 IRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITF 1085

Query: 274  SPNCCENIRNLAFDCFHIPKQNKFGKYLGLESDFGLSKKKIFENLKNKVKTKISSWSNHF 453
                    +N   +   I      GKYLGL   FG  K+ +F  +  +VK + SSWS  +
Sbjct: 1086 GSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKY 1145

Query: 454  LNHAGRETLIKAVLEALPTYTMSCFYIPINVLEDI 558
            L+ AG+E ++K+V  ++P Y MSCF +P+N++ +I
Sbjct: 1146 LSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEI 1180