BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025329
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34116.3| unnamed protein product [Vitis vinifera]               98   6e-19
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...    98   6e-19
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...    84   1e-14
ref|XP_003621292.1| Pentatricopeptide repeat-containing protein ...    73   2e-11
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...    72   4e-11

>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
 Frame = +2

Query: 38  MWFSTSKLVSFGKLITHCKVSRFYSI--SAAIQPTTTF---EQLPISTYTPISSSLHSFE 202
           MW S+++ VS  K ITH +++RF S+   A + P   +   E+  + TY+  S      +
Sbjct: 1   MWVSSTRWVSCRKFITHVQLTRFNSVWGLAHLSPAAQYPIAEEQAVYTYSKDSVGDRFID 60

Query: 203 LDTDGVVGILNNLKKKPDDALSFFRQVHSHGFCHDIKCYSAIVRILCGSGLEKRLGSLFL 382
           L+T  VV I  NLK +P+ A SFF Q+   GF H++  Y+A++R+LC   LE++L SL  
Sbjct: 61  LNTSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLS 120

Query: 383 EIIGSKKKHPHFEVSALFKLLAE 451
           EI+GSK+    F+++ALF +L E
Sbjct: 121 EIVGSKESVLGFDITALFDVLRE 143


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/143 (39%), Positives = 87/143 (60%), Gaps = 5/143 (3%)
 Frame = +2

Query: 38  MWFSTSKLVSFGKLITHCKVSRFYSI--SAAIQPTTTF---EQLPISTYTPISSSLHSFE 202
           MW S+++ VS  K ITH +++RF S+   A + P   +   E+  + TY+  S      +
Sbjct: 1   MWVSSTRWVSCRKFITHVQLTRFNSVWGLAHLSPAAQYPIAEEQAVYTYSKDSVGDRFID 60

Query: 203 LDTDGVVGILNNLKKKPDDALSFFRQVHSHGFCHDIKCYSAIVRILCGSGLEKRLGSLFL 382
           L+T  VV I  NLK +P+ A SFF Q+   GF H++  Y+A++R+LC   LE++L SL  
Sbjct: 61  LNTSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLS 120

Query: 383 EIIGSKKKHPHFEVSALFKLLAE 451
           EI+GSK+    F+++ALF +L E
Sbjct: 121 EIVGSKESVLGFDITALFDVLRE 143


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 53/139 (38%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
 Frame = +2

Query: 38  MWFSTSKLVSFGKLITHCKVSRFYSISAAIQPTTTFEQ-LPISTYTPISSSLHSFELDTD 214
           MW S+ KL S  K I H    R Y++SA        E+   I+T+     + H FE++T 
Sbjct: 1   MWVSSIKLFSCRKYIKHVNFIRLYTVSALAHFNYPIEEEQTINTHYQNPVTNHLFEINTA 60

Query: 215 GVVGILNNLKKKPDDALSFFRQVHSHGFCHDIKCYSAIVRILCGSGLEKRLGSLFLEIIG 394
            VV  LNNL+ +P  A S+F Q+   G+ HD   Y+AIVRILC  G  ++L S+ +EII 
Sbjct: 61  KVVITLNNLRNEPSLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEII- 119

Query: 395 SKKKHPHFEVSALFKLLAE 451
            K  +  F +  LF+ L +
Sbjct: 120 KKDGNLDFGIVNLFEALGD 138


>ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355496307|gb|AES77510.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 738

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
 Frame = +2

Query: 65  SFGKLITHCKVSRFYSISAAIQPTTTFEQLPISTYTPISSSLHSFELDTDGVVGILNNLK 244
           SF K  T  K  RF S +A    ++        T+    S + SFE +T  ++  L   +
Sbjct: 20  SFSKSKTIHKTLRFSSSTALALSSS-------ETHFTKPSKISSFEPNTFKILQKLYLYQ 72

Query: 245 KKPDDALSFFRQV-HSHGFCHDIKCYSAIVRILCGSGLEKRLGSLFLEIIGSKKKHPHFE 421
             P  A S+F Q+ + HGF H+I+ Y++I+RILC   L+++L SLFL+II   K+ P FE
Sbjct: 73  NNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSLFLDIIDHSKQDPCFE 132

Query: 422 VSALFKLLAE 451
           ++ LF  L E
Sbjct: 133 INVLFDSLFE 142


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
 Frame = +2

Query: 200 ELDTDGVVGILNNLKKKPDDALSFFRQVHSHGFCHDIKCYSAIVRILCGSGLEKRLGSLF 379
           +LD+  VV IL NLK +P  ALSFF Q+   GF HDI  Y+AI+RILC  GL K+L S+F
Sbjct: 63  QLDSFKVVDILYNLKNQPISALSFFNQLKDSGFKHDISTYAAIIRILCYWGLHKQLRSIF 122

Query: 380 LEII--GSKKKHPHFEVSALFKLLAE 451
           L+II          FE+S     L++
Sbjct: 123 LDIIYVSCNDNDTPFEISHFLDTLSD 148