BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025320
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]                  238   4e-61
gb|ABF96473.1| retrotransposon protein, putative, Ty3-gypsy subc...   233   2e-59
gb|AAK52140.1|AC084380_13 retrotransposon protein, putative, Ty3...   233   2e-59
gb|ABF97503.1| retrotransposon protein, putative, unclassified [...   232   2e-59
gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Ja...   232   2e-59

>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
          Length = 2097

 Score =  238 bits (607), Expect = 4e-61
 Identities = 112/169 (66%), Positives = 139/169 (82%), Gaps = 1/169 (0%)
 Frame = -2

Query: 504  KKSNGKWRMCVDFTNLNKACPKDSYPLPRIDKLVDSIAGFKTLSFIDAYSGYHQVRMNER 325
            +K+NGKWRMC+DFT+LNKACPKD +PLPRID+LVDS +G + LSF+DAYSGYHQ+ M + 
Sbjct: 1116 RKNNGKWRMCIDFTDLNKACPKDDFPLPRIDQLVDSTSGCELLSFLDAYSGYHQISMCKE 1175

Query: 324  DKKYTAFRAAGALYNYKMMPFGLKNAGATYQRMINKVFSSQIGRNIEAYVDDMVVKSQTA 145
            D++ T+F      Y Y  MPFGLKNAGAT+QR++ K FS QIGRN+EAYVDD+VVK+  A
Sbjct: 1176 DEEKTSFITPYGTYCYIKMPFGLKNAGATFQRLMQKTFSPQIGRNLEAYVDDLVVKNTNA 1235

Query: 144  -NHIDDLEETFANLRATNMKLNPSKCLFGVTAGKFLGYMVSQRGIEANP 1
             +HI DL+ETF NLR  N+KLNP KC+FGV+AGK LG++VS RGIEANP
Sbjct: 1236 GDHIPDLQETFNNLRRHNLKLNPEKCVFGVSAGKLLGFLVSARGIEANP 1284


>gb|ABF96473.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1275

 Score =  233 bits (593), Expect = 2e-59
 Identities = 111/169 (65%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
 Frame = -2

Query: 504  KKSNGKWRMCVDFTNLNKACPKDSYPLPRIDKLVDSIAGFKTLSFIDAYSGYHQVRMNER 325
            +KSNGKWRMCVDFTNLNKACPKD +PLPRID+LVDS AG + +SF+DAYSGYHQ+RMN  
Sbjct: 658  RKSNGKWRMCVDFTNLNKACPKDDFPLPRIDQLVDSTAGCELMSFLDAYSGYHQIRMNPA 717

Query: 324  DKKYTAFRAAGALYNYKMMPFGLKNAGATYQRMINKVFSSQIGRNIEAYVDDMVVKSQTA 145
                TA       + +  MPFGL+NAGAT+ R++ KV   Q+GRN+EAYVDD+VVKS+ A
Sbjct: 718  SIPKTALITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGRNVEAYVDDIVVKSRKA 777

Query: 144  -NHIDDLEETFANLRATNMKLNPSKCLFGVTAGKFLGYMVSQRGIEANP 1
             +H  DL+ETF NLRA  MKLNP KC+FGV AGK LG++VS+RGIEANP
Sbjct: 778  FDHASDLQETFDNLRAAGMKLNPEKCVFGVRAGKLLGFLVSERGIEANP 826


>gb|AAK52140.1|AC084380_13 retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group]
          Length = 1201

 Score =  233 bits (593), Expect = 2e-59
 Identities = 111/169 (65%), Positives = 134/169 (79%), Gaps = 1/169 (0%)
 Frame = -2

Query: 504  KKSNGKWRMCVDFTNLNKACPKDSYPLPRIDKLVDSIAGFKTLSFIDAYSGYHQVRMNER 325
            +KSNGKWRMCVDFTNLNKACPKD +PLPRID+LVDS AG + +SF+DAYSGYHQ+RMN  
Sbjct: 584  RKSNGKWRMCVDFTNLNKACPKDDFPLPRIDQLVDSTAGCELMSFLDAYSGYHQIRMNPA 643

Query: 324  DKKYTAFRAAGALYNYKMMPFGLKNAGATYQRMINKVFSSQIGRNIEAYVDDMVVKSQTA 145
                TA       + +  MPFGL+NAGAT+ R++ KV   Q+GRN+EAYVDD+VVKS+ A
Sbjct: 644  SIPKTALITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGRNVEAYVDDIVVKSRKA 703

Query: 144  -NHIDDLEETFANLRATNMKLNPSKCLFGVTAGKFLGYMVSQRGIEANP 1
             +H  DL+ETF NLRA  MKLNP KC+FGV AGK LG++VS+RGIEANP
Sbjct: 704  FDHASDLQETFDNLRAAGMKLNPEKCVFGVRAGKLLGFLVSERGIEANP 752


>gb|ABF97503.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1172

 Score =  232 bits (592), Expect = 2e-59
 Identities = 110/169 (65%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
 Frame = -2

Query: 504  KKSNGKWRMCVDFTNLNKACPKDSYPLPRIDKLVDSIAGFKTLSFIDAYSGYHQVRMNER 325
            +KSNGKWRMCVDFT+LNKACPKD +PLPRID+LVDS AG + +SF+DAYSGYHQ+RMN  
Sbjct: 653  RKSNGKWRMCVDFTDLNKACPKDDFPLPRIDRLVDSTAGCELMSFLDAYSGYHQIRMNPA 712

Query: 324  DKKYTAFRAAGALYNYKMMPFGLKNAGATYQRMINKVFSSQIGRNIEAYVDDMVVKSQTA 145
            D   TAF      + +  MPFGL+NAGAT+ R++ KV   Q+G+N+EAYVDD+VVKS+ A
Sbjct: 713  DIPKTAFITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGQNVEAYVDDIVVKSRKA 772

Query: 144  -NHIDDLEETFANLRATNMKLNPSKCLFGVTAGKFLGYMVSQRGIEANP 1
             +H  DL+ETF NL A  MKLNP KC+FGV AGK LG++VS+RGIEANP
Sbjct: 773  FDHASDLQETFDNLHAAGMKLNPEKCVFGVRAGKLLGFLVSERGIEANP 821


>gb|AAT81681.1| putative retrotransposon protein [Oryza sativa Japonica Group]
          Length = 1168

 Score =  232 bits (592), Expect = 2e-59
 Identities = 110/169 (65%), Positives = 135/169 (79%), Gaps = 1/169 (0%)
 Frame = -2

Query: 504  KKSNGKWRMCVDFTNLNKACPKDSYPLPRIDKLVDSIAGFKTLSFIDAYSGYHQVRMNER 325
            +KSNGKWRMCVDFT+LNKACPKD +PLPRID+LVDS AG + +SF+DAYSGYHQ+RMN  
Sbjct: 649  RKSNGKWRMCVDFTDLNKACPKDDFPLPRIDRLVDSTAGCELMSFLDAYSGYHQIRMNPA 708

Query: 324  DKKYTAFRAAGALYNYKMMPFGLKNAGATYQRMINKVFSSQIGRNIEAYVDDMVVKSQTA 145
            D   TAF      + +  MPFGL+NAGAT+ R++ KV   Q+G+N+EAYVDD+VVKS+ A
Sbjct: 709  DIPKTAFITPFGTFCHLRMPFGLRNAGATFARLVYKVLYKQLGQNVEAYVDDIVVKSRKA 768

Query: 144  -NHIDDLEETFANLRATNMKLNPSKCLFGVTAGKFLGYMVSQRGIEANP 1
             +H  DL+ETF NL A  MKLNP KC+FGV AGK LG++VS+RGIEANP
Sbjct: 769  FDHASDLQETFDNLHAAGMKLNPEKCVFGVRAGKLLGFLVSERGIEANP 817