BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025272
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    91   2e-19
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...    92   4e-19
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    92   4e-19
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...    97   4e-19
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    97   2e-18

>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 90.5 bits (223), Expect(2) = 2e-19
 Identities = 44/90 (48%), Positives = 58/90 (64%)
 Frame = +1

Query: 88  QINHTLIALIPKSECPLNLTQYRPIALCNCVYKILSKILANRLSLIMPNINSENQGAFIS 267
           ++N T I LIPK+E P  +T+ RPI+LCN  YK++SKIL  RL  ++PN+ SE Q AF+ 
Sbjct: 267 RLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVD 326

Query: 268 GRHINDNIIIVNEFLHYLRKKKVGSDYHFA 357
           GR I+DNI+I  E  H LR      D   A
Sbjct: 327 GRLISDNILIAQEMFHGLRTNSSCKDKFMA 356



 Score = 30.0 bits (66), Expect(2) = 2e-19
 Identities = 10/20 (50%), Positives = 17/20 (85%)
 Frame = +3

Query: 3   FFKKHWLIVKSDIISVIHYF 62
           FF+K W I+KSD++S+++ F
Sbjct: 239 FFQKSWAIIKSDLLSLVNSF 258


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score = 91.7 bits (226), Expect(2) = 4e-19
 Identities = 42/85 (49%), Positives = 60/85 (70%)
 Frame = +1

Query: 79   LPTQINHTLIALIPKSECPLNLTQYRPIALCNCVYKILSKILANRLSLIMPNINSENQGA 258
            +P+ +N T I LIPK+E P  L  +RPI+LCN VYKI+SK L NRL  I+ ++ S+NQ A
Sbjct: 1051 MPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSA 1110

Query: 259  FISGRHINDNIIIVNEFLHYLRKKK 333
            F+ GR I DN +I  E+ H++++ K
Sbjct: 1111 FVPGRLITDNALIAFEYFHHIQRNK 1135



 Score = 27.7 bits (60), Expect(2) = 4e-19
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 3    FFKKHWLIVKSDIISVIHYFFFL 71
            F++++W I+K DI+  +  FF L
Sbjct: 1026 FYQRNWAILKDDIVRAVQEFFSL 1048


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score = 91.7 bits (226), Expect(2) = 4e-19
 Identities = 42/85 (49%), Positives = 60/85 (70%)
 Frame = +1

Query: 79   LPTQINHTLIALIPKSECPLNLTQYRPIALCNCVYKILSKILANRLSLIMPNINSENQGA 258
            +P+ +N T I LIPK+E P  L  +RPI+LCN VYKI+SK L NRL  I+ ++ S+NQ A
Sbjct: 1016 MPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRLRPILDDLVSQNQSA 1075

Query: 259  FISGRHINDNIIIVNEFLHYLRKKK 333
            F+ GR I DN +I  E+ H++++ K
Sbjct: 1076 FVPGRLITDNALIAFEYFHHIQRNK 1100



 Score = 27.7 bits (60), Expect(2) = 4e-19
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 3    FFKKHWLIVKSDIISVIHYFFFL 71
            F++++W I+K DI+  +  FF L
Sbjct: 991  FYQRNWAILKDDIVRAVQEFFSL 1013


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score = 96.7 bits (239), Expect(2) = 4e-19
 Identities = 44/79 (55%), Positives = 62/79 (78%)
 Frame = +1

Query: 94   NHTLIALIPKSECPLNLTQYRPIALCNCVYKILSKILANRLSLIMPNINSENQGAFISGR 273
            NH+LIALIPK + P  +T+YRPI+LCN VYK++SK+LANRL  ++P + +ENQ AF+S R
Sbjct: 773  NHSLIALIPKVQNPKKVTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAENQSAFMSQR 832

Query: 274  HINDNIIIVNEFLHYLRKK 330
             I+DNII   E +H L+++
Sbjct: 833  IIHDNIIAAFEIIHCLKRR 851



 Score = 22.7 bits (47), Expect(2) = 4e-19
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +3

Query: 3   FFKKHWLIVKSDIISV 50
           FF+K W I+ +D++ V
Sbjct: 743 FFQKFWNIIGNDVVDV 758


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/87 (51%), Positives = 60/87 (68%)
 Frame = +1

Query: 79  LPTQINHTLIALIPKSECPLNLTQYRPIALCNCVYKILSKILANRLSLIMPNINSENQGA 258
           +P + N T+I LIPK   P N+   RPI+LCN +YKI+SK+LANRL  I+P + S  Q A
Sbjct: 174 MPPEWNETIIVLIPKVPKPENIKDLRPISLCNVLYKIVSKVLANRLKTILPEVISPTQSA 233

Query: 259 FISGRHINDNIIIVNEFLHYLRKKKVG 339
           F+ GR I+DNI++  E  HY+R KK G
Sbjct: 234 FVPGRLISDNILVAYEMTHYMRSKKRG 260