BLASTX nr result

ID: Aconitum21_contig00025060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00025060
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   144   6e-33
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   144   6e-33
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   142   3e-32
ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
emb|CBI31157.3| unnamed protein product [Vitis vinifera]              138   5e-31

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/108 (68%), Positives = 83/108 (76%), Gaps = 6/108 (5%)
 Frame = -2

Query: 451 LKKLEYLSLVSKVCTELESHLGFEDKTLAEFITEMGRDADSVEDFDSKLKQNGAEMPDYF 272
           LKKLEYLSLVSKVCTELE+HLG  DK LAEFIT+MGR  ++V++FDSKLK+NGAEMPDYF
Sbjct: 10  LKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEMPDYF 69

Query: 271 VRTLFTIIHAILPSKSKLDDKGTNPEAG------FTGLSIADGKARVK 146
           VRTL TIIHAILP K K DDKG   + G      F  L I D K RV+
Sbjct: 70  VRTLLTIIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVR 117


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  144 bits (364), Expect = 6e-33
 Identities = 74/108 (68%), Positives = 83/108 (76%), Gaps = 6/108 (5%)
 Frame = -2

Query: 451 LKKLEYLSLVSKVCTELESHLGFEDKTLAEFITEMGRDADSVEDFDSKLKQNGAEMPDYF 272
           LKKLEYLSLVSKVCTELE+HLG  DK LAEFIT+MGR  ++V++FDSKLK+NGAEMPDYF
Sbjct: 10  LKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEMPDYF 69

Query: 271 VRTLFTIIHAILPSKSKLDDKGTNPEAG------FTGLSIADGKARVK 146
           VRTL TIIHAILP K K DDKG   + G      F  L I D K RV+
Sbjct: 70  VRTLLTIIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKERVR 117


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  142 bits (358), Expect = 3e-32
 Identities = 73/106 (68%), Positives = 81/106 (76%), Gaps = 6/106 (5%)
 Frame = -2

Query: 451 LKKLEYLSLVSKVCTELESHLGFEDKTLAEFITEMGRDADSVEDFDSKLKQNGAEMPDYF 272
           LKKLEYLSLVSKVCTELE+HLG  DK LAEFIT+MGR  ++V++FDSKLK+NGAEMPDYF
Sbjct: 10  LKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEMPDYF 69

Query: 271 VRTLFTIIHAILPSKSKLDDKGTNPEAG------FTGLSIADGKAR 152
           VRTL TIIHAILP K K DDKG   + G      F  L I D K R
Sbjct: 70  VRTLLTIIHAILPPKPKSDDKGMKKDGGDGKKSKFPALGIGDSKER 115


>ref|XP_002318357.1| predicted protein [Populus trichocarpa] gi|222859030|gb|EEE96577.1|
           predicted protein [Populus trichocarpa]
          Length = 1207

 Score =  139 bits (350), Expect = 2e-31
 Identities = 70/108 (64%), Positives = 86/108 (79%), Gaps = 6/108 (5%)
 Frame = -2

Query: 451 LKKLEYLSLVSKVCTELESHLGFEDKTLAEFITEMGRDADSVEDFDSKLKQNGAEMPDYF 272
           LKKLEYLSLVSKVC+ELE+HLGF DK LAEFITE+GR  D+V++FD+KLK+NGAEMPDYF
Sbjct: 11  LKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCDTVDEFDAKLKENGAEMPDYF 70

Query: 271 VRTLFTIIHAILPSKSK------LDDKGTNPEAGFTGLSIADGKARVK 146
           VRTL TIIHAILP K++      ++  G+  ++ F  LSI D + RVK
Sbjct: 71  VRTLLTIIHAILPPKAEKEVKKDMEGDGSGKDSKFKALSIQDSRDRVK 118


>emb|CBI31157.3| unnamed protein product [Vitis vinifera]
          Length = 803

 Score =  138 bits (347), Expect = 5e-31
 Identities = 67/88 (76%), Positives = 75/88 (85%)
 Frame = -2

Query: 451 LKKLEYLSLVSKVCTELESHLGFEDKTLAEFITEMGRDADSVEDFDSKLKQNGAEMPDYF 272
           LKKLEYLSLVSKVCTELE+HLG  DK LAEFIT+MGR  ++V++FDSKLK+NGAEMPDYF
Sbjct: 49  LKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEMPDYF 108

Query: 271 VRTLFTIIHAILPSKSKLDDKGTNPEAG 188
           VRTL TIIHAILP K K DDKG   + G
Sbjct: 109 VRTLLTIIHAILPPKPKSDDKGMKKDGG 136


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