BLASTX nr result
ID: Aconitum21_contig00024499
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00024499
(1658 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 685 0.0
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 683 0.0
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 616 e-174
ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arab... 585 e-164
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 583 e-164
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 685 bits (1767), Expect = 0.0
Identities = 344/539 (63%), Positives = 414/539 (76%)
Frame = -3
Query: 1617 SVHEARCVFMHVHMVSSVAKYMARLSLILSKTVKLEIDLAMVNIERIADIPCLGPDGDII 1438
+VHEARC+FMH HMVSSVAKYMAR SLILSKTVKL++DL+ VNI+RI D P DG ++
Sbjct: 295 TVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVV 354
Query: 1437 YGEDGEPLIHTDGTGYISEDLAWRCPHNIFKVQDRIQGEFERVLDSVTHDGSPSALPQCH 1258
Y ED +PLI TDGTG+ISEDLA RCP+N+ + + G + V DS
Sbjct: 355 YDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSD-VCDS-------------- 399
Query: 1257 IREPPLLIQCRLFINGTAVKGTFLVNKKLPPNTIQIRHSMIKVETDPKLLGIQSANSLEI 1078
PLLIQCRLF NG AVKGT L+N+KLPP TIQIR SMIKVETDPKL Q+ NS+EI
Sbjct: 400 --RYPLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEI 457
Query: 1077 VSTSYRPRKTSILSRYLIALLNYGGVSTEFFMELVANSLEDARTAHFNKRVALKVSLNYG 898
TS +PR+ S LS+YLIALL+YGGV E+FM L+ ++LEDA + +KR AL+VSL +G
Sbjct: 458 NGTSNQPRR-SYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFG 516
Query: 897 EIDDFVVPRMILCGIPLDEPYLRDRLSLIMREERKGLKDGKLPITECYYLMGTADPTGML 718
E+DD +V RMIL GIP+DEP+L LS ++ EERKGL+ GKLP+ +C+YLMGTADPTG L
Sbjct: 517 EMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTL 576
Query: 717 KDDEVCVILDHGQVSGKVLVYRHPGLHFGDIHLLTATCVKEIEEVVGNSKYAIFFPSKGP 538
K DEVC+ILDHGQV G+VLVY+HPGLHFGDIH+L AT V+ +EE VGN+KYAIFFP KGP
Sbjct: 577 KSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGP 636
Query: 537 RSLASEIANGDFDGDMYWISRNPELLESYNPSEPWTRKYSTKSTHQRKPVDFSLKELEDV 358
RSLA E+AN DFDGDMYW+SRN +LL+ + SEPW RK ST+ ++P DFS ELE
Sbjct: 637 RSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHE 696
Query: 357 LFQQFLTCRFQPSNNIGSAADSWLAFMDRLLTLNDDCVEEKHCLRRKMLHLVDVYYDALD 178
LFQ FLT RFQ S+ IG AAD+WL FMDRLLTL DDC +EK CL+RKML L D+YYDALD
Sbjct: 697 LFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALD 756
Query: 177 APKTGKKVEVPKELKAEKFPHYMGRPNFYRSKSVLGQIYDMVDSFQTTELLSEDIWKLP 1
APK+G KV V KELKAEKFPH+MGR + Y S S+LGQIYD V+SFQ +++IW+LP
Sbjct: 757 APKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLP 815
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 683 bits (1762), Expect = 0.0
Identities = 341/539 (63%), Positives = 411/539 (76%)
Frame = -3
Query: 1617 SVHEARCVFMHVHMVSSVAKYMARLSLILSKTVKLEIDLAMVNIERIADIPCLGPDGDII 1438
+VHEARC+FMH HMVSSVAKYMAR SLILSKTVKL++DL+ VNI+RI D P DG ++
Sbjct: 287 TVHEARCIFMHAHMVSSVAKYMARFSLILSKTVKLDVDLSTVNIQRIDDEPGRDEDGHVV 346
Query: 1437 YGEDGEPLIHTDGTGYISEDLAWRCPHNIFKVQDRIQGEFERVLDSVTHDGSPSALPQCH 1258
Y ED +PLI TDGTG+ISEDLA RCP+N+ + + G +
Sbjct: 347 YDEDWKPLILTDGTGFISEDLALRCPNNLCRGKYMNNGNSD------------------- 387
Query: 1257 IREPPLLIQCRLFINGTAVKGTFLVNKKLPPNTIQIRHSMIKVETDPKLLGIQSANSLEI 1078
PLLIQCRLF NG AVKGT L+N+KLPP TIQIR SMIKVETDPKL Q+ NS+EI
Sbjct: 388 ----PLLIQCRLFNNGCAVKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEI 443
Query: 1077 VSTSYRPRKTSILSRYLIALLNYGGVSTEFFMELVANSLEDARTAHFNKRVALKVSLNYG 898
TS +PR+ S LS+YLIALL+YGGV E+FM L+ ++LEDA + +KR AL+VSL +G
Sbjct: 444 NGTSNQPRR-SYLSKYLIALLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFG 502
Query: 897 EIDDFVVPRMILCGIPLDEPYLRDRLSLIMREERKGLKDGKLPITECYYLMGTADPTGML 718
E+DD +V RMIL GIP+DEP+L LS ++ EERKGL+ GKLP+ +C+YLMGTADPTG L
Sbjct: 503 EMDDSIVTRMILSGIPIDEPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTL 562
Query: 717 KDDEVCVILDHGQVSGKVLVYRHPGLHFGDIHLLTATCVKEIEEVVGNSKYAIFFPSKGP 538
K DEVC+ILDHGQV G+VLVY+HPGLHFGDIH+L AT V+ +EE VGN+KYAIFFP KGP
Sbjct: 563 KSDEVCIILDHGQVQGRVLVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGP 622
Query: 537 RSLASEIANGDFDGDMYWISRNPELLESYNPSEPWTRKYSTKSTHQRKPVDFSLKELEDV 358
RSLA E+AN DFDGDMYW+SRN +LL+ + SEPW RK ST+ ++P DFS ELE
Sbjct: 623 RSLADEMANSDFDGDMYWVSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHE 682
Query: 357 LFQQFLTCRFQPSNNIGSAADSWLAFMDRLLTLNDDCVEEKHCLRRKMLHLVDVYYDALD 178
LFQ FLT RFQ S+ IG AAD+WL FMDRLLTL DDC +EK CL+RKML L D+YYDALD
Sbjct: 683 LFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALD 742
Query: 177 APKTGKKVEVPKELKAEKFPHYMGRPNFYRSKSVLGQIYDMVDSFQTTELLSEDIWKLP 1
APK+G KV V KELKAEKFPH+MGR + Y S S+LGQIYD V+SFQ +++IW+LP
Sbjct: 743 APKSGMKVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLP 801
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 616 bits (1589), Expect = e-174
Identities = 319/554 (57%), Positives = 409/554 (73%), Gaps = 8/554 (1%)
Frame = -3
Query: 1638 PHTSFNMSVHEARCVFMHVHMVSSVAKYMARLSLILSKTVKLEIDLAMVNIERIADIPCL 1459
P+ N +V EAR +FMH HMVSS+A YMAR SLILSKT+ L+IDL+ VN++RI DIPC
Sbjct: 380 PYKLSNRTVFEARSLFMHAHMVSSIASYMARFSLILSKTINLKIDLSTVNVQRIGDIPCK 439
Query: 1458 GPDGDIIYGEDGEPLIHTDGTGYISEDLAWRCPHNIFKVQDRIQGEFERVLDSV-THDGS 1282
G++IY DG+PLIHTDGTG+ISEDLA CP N+FK Q + + + + + +G
Sbjct: 440 DIYGNVIY-RDGKPLIHTDGTGFISEDLALECPMNVFKGQAKHDADLKAIWQRIPAFEGF 498
Query: 1281 PS-----ALPQCHIREPPLLIQCRLFINGTAVKGTFLVNKKLPPNTIQIRHSMIKVETDP 1117
+ LP +REPPLLIQ RLF NG AVKGTFL+NK+LPP TIQIR SMIKVE DP
Sbjct: 499 QNKTLQLTLPGLELREPPLLIQFRLFYNGLAVKGTFLLNKQLPPRTIQIRDSMIKVEIDP 558
Query: 1116 KLLGIQSANSLEIVSTSYRPRKTSILSRYLIALLNYGGVSTEFFMELVANSLEDARTAHF 937
L ++ NSLE+V TS P++T LSR LIALLNYGGV E+FM ++ ++L+D +
Sbjct: 559 DLENFETENSLELVGTSNPPKRT-FLSRNLIALLNYGGVPREYFMNILVDALKDVQGVFS 617
Query: 936 NKRVALKVSLNYGEIDDFVVPRMILCGIPLDEPYLRDRLSLIMREERKGLKDGKLPITEC 757
+KR AL+VS+N GE+DDF+V RMIL GIPLDE YL+ RLS++++EE+K LK G+L + EC
Sbjct: 618 SKRAALRVSINNGEMDDFLVARMILAGIPLDESYLQYRLSVLLKEEKKSLKSGRLHVPEC 677
Query: 756 YYLMGTADPTGMLKDDEVCVILDHGQVSGKVLVYRHPGLHFGDIHLLTATCVKEIEEVVG 577
YYLMGT DPT L+ EVCVIL +GQ++GKVLVYR+PGLHFGDIH+LTA V+++ VVG
Sbjct: 678 YYLMGTVDPTFTLESGEVCVILYNGQINGKVLVYRNPGLHFGDIHVLTAKYVEKLVPVVG 737
Query: 576 NSKYAIFFPSKGPRSLASEIANGDFDGDMYWISRNPELLESYNPSEPWTRKYSTKSTHQR 397
N+KYAIFF SKGPRS+A EIA GDFDGDMYW+SRN +LLE + P EPW ST+ +
Sbjct: 738 NAKYAIFFSSKGPRSVADEIAGGDFDGDMYWVSRNSQLLEYFRPCEPWRPSPSTEVVTNK 797
Query: 396 KPVDFSLKELEDVLFQQFLTCRFQPSNNIGSAADSWLAFMDRLLTLNDDCVEEKHCLRRK 217
KP +FS ELE+ LF+ FL+ RFQPS AAD+WLA MD+ L L ++ EE++C+R K
Sbjct: 798 KPKEFSADELENELFKLFLSTRFQPSYAKSVAADNWLALMDQFLMLGEERKEERNCIRAK 857
Query: 216 MLHLVDVYYDALDAPKT-GKKVEVPKELKAEKFPHYMGR-PNFYRSKSVLGQIYDMVDSF 43
+L L+++YYDALDAPK GKK+EVPK LKA PH+M R N Y S S+LGQI+D + +
Sbjct: 858 ILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMY 917
Query: 42 QTTELLSEDIWKLP 1
Q E+ + ++ KLP
Sbjct: 918 Q-EEVPNIEVQKLP 930
>ref|NP_179583.3| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| RNA-dependent RNA
polymerase-like protein [Arabidopsis thaliana]
Length = 977
Score = 585 bits (1507), Expect = e-164
Identities = 307/555 (55%), Positives = 394/555 (70%), Gaps = 3/555 (0%)
Frame = -3
Query: 1656 FVQWKRPHTSFNMSVHEARCVFMHVHMVSSVAKYMARLSLILSKTVKLEIDLAMVNIERI 1477
F + P+ S++EAR FMHVH ++A YMAR SLILSKT LE+D+ + ++I
Sbjct: 316 FYDMQNPYILTGKSIYEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDQI 375
Query: 1476 ADIPCLGPDGDIIYGEDGEPLIHTDGTGYISEDLAWRCPHNIFKVQDRIQGEFERVLDSV 1297
DI C DG + ++ +P IH+DGTGYISEDLA CP NIFK G+ R
Sbjct: 376 DDIHCHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFK------GKCLR----- 424
Query: 1296 THDGSPSALPQCHIREPPLLIQCRLFINGTAVKGTFLVNKKLPPNTIQIRHSMIKVETDP 1117
S S C+ ++PPLLIQ R+F +G AVKGTFL+NKKL P T+Q+R SMIKV DP
Sbjct: 425 ----SESIQEACY-QDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDP 479
Query: 1116 KLLGIQSANSLEIVSTSYRPRKTSILSRYLIALLNYGGVSTEFFMELVANSLEDARTAHF 937
L + N+LE+V+TS P++T LS+ L+ALL+YGG+ EFF++++ N+LE++++ +
Sbjct: 480 SLSNFSTFNALEVVTTSNPPKRTK-LSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFY 538
Query: 936 NKRVALKVSLNYGEIDDFVVPRMILCGIPLDEPYLRDRLSLIMREERKGLKDGKLPITEC 757
NKR AL +LNYGE+DD +MIL GIPLDEP+L++ LS++++ E+ LK GKLP+TE
Sbjct: 539 NKRAALNAALNYGEMDDQNAAQMILVGIPLDEPHLKNYLSILLKTEKNDLKAGKLPVTES 598
Query: 756 YYLMGTADPTGMLKDDEVCVILDHGQVSGKVLVYRHPGLHFGDIHLLTATCVKEIEEVVG 577
YYLMGT DPTG LK+DEVCVIL+ GQ+SG+VLVYR+PGLHFGDIH+L AT VK +EE VG
Sbjct: 599 YYLMGTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVG 658
Query: 576 NSKYAIFFPSKGPRSLASEIANGDFDGDMYWISRNPELLESYNPSEPW-TRKYSTKSTHQ 400
NSK+A+FFP KGPRSL EIA GDFDGDMY+ISRNPELLE++ PSEPW + +KS
Sbjct: 659 NSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKSNSG 718
Query: 399 RKPVDFSLKELEDVLFQQFLTCRFQPSNNIGSAADSWLAFMDRLLTLNDDCVEEKHCLRR 220
R P S +ELE+ LF+ FLT F SN IG AADSWL MDR L L DD EEK +++
Sbjct: 719 RAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKK 778
Query: 219 KMLHLVDVYYDALDAPKTGKKVEVPKELKAEKFPHYMGRPNFYRSKSVLGQIYDMVDSFQ 40
KML L+D+YYDALDAPK G KV +P +LK + FPHYM R ++S S+LG I+D V S Q
Sbjct: 779 KMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDKKFQSTSILGLIFDFVKS-Q 837
Query: 39 TTE--LLSEDIWKLP 1
TTE S +I KLP
Sbjct: 838 TTEEPSPSSEISKLP 852
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 583 bits (1504), Expect = e-164
Identities = 307/551 (55%), Positives = 391/551 (70%), Gaps = 3/551 (0%)
Frame = -3
Query: 1644 KRPHTSFNMSVHEARCVFMHVHMVSSVAKYMARLSLILSKTVKLEIDLAMVNIERIADIP 1465
+ P+ S+HEAR FMHVH ++A YMAR SLILSKT LE+D+ + + I DI
Sbjct: 324 ENPYIFTGKSIHEARMHFMHVHRAPTLANYMARFSLILSKTKTLEVDMTGITFDPIDDIH 383
Query: 1464 CLGPDGDIIYGEDGEPLIHTDGTGYISEDLAWRCPHNIFKVQDRIQGEFERVLDSVTHDG 1285
C DG + ++ +P IH+DGTGYISEDLA CP NIFK G+ R
Sbjct: 384 CHDQDGKDVLDKNKKPCIHSDGTGYISEDLARMCPLNIFK------GKCLR--------- 428
Query: 1284 SPSALPQCHIREPPLLIQCRLFINGTAVKGTFLVNKKLPPNTIQIRHSMIKVETDPKLLG 1105
S + C+ ++PPLLIQ R+F +G AVKGTFL+NKKL P T+Q+R SMIKV DP L
Sbjct: 429 SENIQEACN-QDPPLLIQFRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSN 487
Query: 1104 IQSANSLEIVSTSYRPRKTSILSRYLIALLNYGGVSTEFFMELVANSLEDARTAHFNKRV 925
+ N+LE+V+TS PR+T LS+ L+ALL+YGG+ EFF++++ N+LE++++ +NK
Sbjct: 488 FSTFNALEVVTTSNPPRRTK-LSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKHA 546
Query: 924 ALKVSLNYGEIDDFVVPRMILCGIPLDEPYLRDRLSLIMREERKGLKDGKLPITECYYLM 745
AL V+LNYGE+DD +MIL GIPLDEP+L++ LS++++ E+ LK G+LP+TE YYLM
Sbjct: 547 ALNVALNYGEMDDQNAAQMILVGIPLDEPHLKNHLSILLKTEKNDLKAGRLPVTESYYLM 606
Query: 744 GTADPTGMLKDDEVCVILDHGQVSGKVLVYRHPGLHFGDIHLLTATCVKEIEEVVGNSKY 565
GT DPTG LK+DEVCVIL+ GQ+SG+VLVYR+PGLHFGDIH+L AT VK +EE VGNSKY
Sbjct: 607 GTVDPTGELKEDEVCVILESGQISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKY 666
Query: 564 AIFFPSKGPRSLASEIANGDFDGDMYWISRNPELLESYNPSEPW-TRKYSTKSTHQRKPV 388
A+FFP KGPRSL EIA GDFDGDMY+ISRNPELLE + PSEPW + +KS R P
Sbjct: 667 AVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLEHFKPSEPWVSLTPPSKSNSGRAPS 726
Query: 387 DFSLKELEDVLFQQFLTCRFQPSNNIGSAADSWLAFMDRLLTLNDDCVEEKHCLRRKMLH 208
S +ELE+ LF+ FL F SN IG AADSWL MDRLL L D+ EEK +++KML
Sbjct: 727 QLSPEELEEELFEMFLKAGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLK 786
Query: 207 LVDVYYDALDAPKTGKKVEVPKELKAEKFPHYMGRPNFYRSKSVLGQIYDMVDSFQTTE- 31
L+D+YYDALDAPK G KV +P EL+ + FPHYM R ++S S+LG IYD V S QTTE
Sbjct: 787 LIDIYYDALDAPKKGDKVYLPNELRPDIFPHYMEREKKFKSTSILGLIYDFVKS-QTTEE 845
Query: 30 -LLSEDIWKLP 1
S +I KLP
Sbjct: 846 PTPSSEISKLP 856