BLASTX nr result

ID: Aconitum21_contig00024454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024454
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR18786.1| class S F-box protein [Nicotiana alata]                117   3e-24
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...   116   6e-24
gb|ADE43176.1| SFBBbeta protein, partial [Malus x domestica]          110   3e-22
dbj|BAG12292.1| S locus F-box protein with the low allelic seque...   110   5e-22
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...   109   7e-22

>gb|ABR18786.1| class S F-box protein [Nicotiana alata]
          Length = 388

 Score =  117 bits (294), Expect = 3e-24
 Identities = 102/312 (32%), Positives = 150/312 (48%), Gaps = 27/312 (8%)
 Frame = -3

Query: 858 VASLLRFKLVCVSWYHLIKNSDFVAQHLFHHHYQKSNNNINFILHSSNPLFPFEDSSHPS 679
           V SLLRFK +  SWY LI++S F+  HL      K+     FIL S +    F   +   
Sbjct: 24  VKSLLRFKFISKSWYTLIQSSTFINVHLNRSTITKN----EFILFSRS----FRIETEGF 75

Query: 678 RNTSCTCLLSADKF-------KVLDLPYCR-SWVYRGPTIVASFDGIICLRHDFD-VYLW 526
           +N     ++S+D +       + LDLPY   +  Y    +V   +G+I L  D D + L+
Sbjct: 76  KNV--LSIISSDDYNDLNVVLQDLDLPYLTFTPNYHFNELVGPCNGLIVLTDDDDIIVLF 133

Query: 525 NPATKQFRAVISSEL--SGEFH------FGFGYDVKGKDYKLVRFHSEVNSDI------- 391
           NPATK +  +  S    S  +H       GFG+D  G DYK VR  SEV  D        
Sbjct: 134 NPATKNYMLLPPSPFVCSKGYHRSFIGGVGFGFDSIGNDYKFVRI-SEVFLDTYWGPEER 192

Query: 390 PAFVHVYDFCTDTWRAI--IDKILPTMESIEYSGPIAPYRSGIYCWLGLLDYTTYSHTIL 217
              V VYD  +D+WR +  +D+ LPT   I ++       +G + W  + D T   + IL
Sbjct: 193 EQKVEVYDLRSDSWRDLNHVDQQLPT---IFWNQCFEMLHNGAFHWYAVGDLT---YEIL 246

Query: 216 SFDFSEEVFKTIALPDSINS-SSFSLELAFLRENIVCISMDKQYISEEADNWCFDLWMMN 40
            FDFS E+F+++ +P+S N+       LA + E++  I         +      D+W+M 
Sbjct: 247 CFDFSTEIFRSMKMPESCNAYDGKRYSLAVVNESLTLICYPSPDSEIDQTQNTMDIWIMM 306

Query: 39  EYGIKASWTKLY 4
           EYG+  SWTK Y
Sbjct: 307 EYGVNESWTKKY 318


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score =  116 bits (291), Expect = 6e-24
 Identities = 90/314 (28%), Positives = 136/314 (43%), Gaps = 27/314 (8%)
 Frame = -3

Query: 864 LPVASLLRFKLVCVSWYHLIKNSDFVAQH------------LFHHHYQKSNNNINFILHS 721
           LPV  LLR + +C +WY LI N +F++ H            L   HY +SN    F LH 
Sbjct: 17  LPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLILRHYSRSNKKERFALH- 75

Query: 720 SNPLFPFEDSSHPSRNTSCTCLLSADKFKVLDLPYCRSWVYRGPTIVASFDGIICLRHDF 541
                 F+D    S            +++ LD P   SW Y    IV S +GIICL  + 
Sbjct: 76  ------FDDDDMFS------------EYQELDFPLESSWDYF--EIVGSCNGIICLTDNH 115

Query: 540 D-----VYLWNPATKQFRAVISSELS---GEFHFGFGYDVKGKDYKLVRF-HSEVNSD-- 394
                 + LWNP+      +    +S        GFG+D +  DYK++R  +   N D  
Sbjct: 116 SHILKRIVLWNPSIGLSVTLPLQRISYKVSNVVLGFGFDSRTNDYKVIRIVYYSTNDDSL 175

Query: 393 -IPAFVHVYDFCTDTWRAIIDKILPTMESIEYSGPIAPYRSGIYCWLGLLDYTTYSHTIL 217
            +P  V +++    TWR      +P  +  +YS  I     G   W+G   Y+    TI 
Sbjct: 176 MVPPEVEIFELSRGTWRINNSASVPAYDVSKYSSQIV--LEGAIHWVGY--YSPRELTIA 231

Query: 216 SFDFSEEVFKTIALPDSINSSSFSLELAFLRENIVCISMDKQYISEEADNWCFD---LWM 46
            +   +E FK   +PD I+ ++    L  L   + C  +      +     C++   +W+
Sbjct: 232 VYVVHDEEFKEFRMPDEISGTA----LQHLSVMLCCQLLSIIQYKKRGSRLCYESCCIWV 287

Query: 45  MNEYGIKASWTKLY 4
           MNEYG+  SWTKL+
Sbjct: 288 MNEYGVHDSWTKLF 301


>gb|ADE43176.1| SFBBbeta protein, partial [Malus x domestica]
          Length = 370

 Score =  110 bits (276), Expect = 3e-22
 Identities = 102/320 (31%), Positives = 145/320 (45%), Gaps = 32/320 (10%)
 Frame = -3

Query: 864 LPVASLLRFKLVCVSWYHLIKNSDFVAQHLFHHHYQKSNNNINFILHSSN-PLFPFEDSS 688
           LP  SL+RFK +  SW  LIK+S FVA+HL +    K + +   +L+ S  P+FP +   
Sbjct: 13  LPPKSLMRFKCIHKSWCTLIKSSSFVAKHLSNSMDNKLSTSTCILLNRSEMPVFPDDSWK 72

Query: 687 HPSRNTSCTCLLSADK----FKVLDLPYCRSWVYRGPTIVASF-DGIICLRHDFDVYLWN 523
           +    +     + +D+    + V DL       Y  P ++  + DGI C+    +V L N
Sbjct: 73  YEVLWSMINLSIDSDEHNLHYNVEDLNIPFPMEYHHPVLIHGYCDGIFCVITGENVVLCN 132

Query: 522 PATKQFRAVISS------------ELSGEFH-FGFGYDVKGKDYKLVRF--HSEVNSD-- 394
           PA  +FR +  S            EL   F   GFGYD K K+YK+VR   + E + D  
Sbjct: 133 PAIGEFRQLPDSCLLLPAPPERKFELETTFRALGFGYDCKAKEYKVVRIIENCEYSDDEQ 192

Query: 393 -------IPAFVHVYDFCTDTWRAI-IDKILPTMESIEYSGPIAPYRSGIYCWLGLLDYT 238
                  +P    VY    ++W+ I ID     + S  Y    + Y  G   W      T
Sbjct: 193 TYNHRISLPYTAEVYTTTGNSWKEINID-----VSSKAYPCSCSVYLKGFCYWFA----T 243

Query: 237 TYSHTILSFDFSEEVFKTIALPDSINSSSFSLELAFLRENIVCISMDKQYISEEADNWCF 58
                ILSFD  +E+F  I LP S   S F     FL    V  S    Y   E D+  F
Sbjct: 244 DGEEYILSFDLGDEIFYRIQLP-SRKESGFKFYSLFLYNESV-TSYCSHYDPSE-DSKLF 300

Query: 57  DLWMMNEY-GIKASWTKLYT 1
           ++W+M+ Y G+K+SW KL T
Sbjct: 301 EIWVMDNYDGVKSSWKKLLT 320


>dbj|BAG12292.1| S locus F-box protein with the low allelic sequence polymorphism
           1-S1 [Prunus avium]
          Length = 402

 Score =  110 bits (274), Expect = 5e-22
 Identities = 92/323 (28%), Positives = 147/323 (45%), Gaps = 35/323 (10%)
 Frame = -3

Query: 864 LPVASLLRFKLVCVSWYHLIKNSDFVAQHLFHHHYQKSNNNI---NFILHSSNP------ 712
           LP  SL+RFK V  SWY LI NS FV  HL +  + K +  I    F+    NP      
Sbjct: 14  LPSKSLIRFKSVRKSWYTLINNSTFVENHLSNSMHNKLSTCILFNRFVQSDPNPKEKELA 73

Query: 711 -LFPFEDSSHPSRNTSCTCLLSADKFKVLDLPYCRSWVYRGPTIVASFDGIICLRHDFDV 535
             F +  + +     +  C++   KF +    +    V   P+I+   DG+ICL     +
Sbjct: 74  FSFLYLRNDYDDAENNVNCVVEDIKFPLTSGQFIGLEVIESPSIIGHCDGVICL-SACSL 132

Query: 534 YLWNPATKQFRAVISSELSG--EFHFGFGYDVKGKDYKLVR---FHSEVNSDI-PAFVHV 373
            L NPA  + + +  S L    +   GFGYD K KDYK+ R   + +E++  I P  V +
Sbjct: 133 VLCNPAINEIKLLPESCLPDWWDCAVGFGYDPKSKDYKVSRIATYQAEIDGLIPPPRVEI 192

Query: 372 YDFCTDTWRAIIDKILPTMESIEYSGPIAPYRSGIYCWLGL------LDYTTYSH--TIL 217
           Y   TD+WR I +  L T  +  +      Y  GI  W+G       ++Y        ++
Sbjct: 193 YTLSTDSWREIKNNSLETDTTCFFPDYFQMYFQGICYWVGYEQPKQSVEYEDEEQKPMVI 252

Query: 216 SFDFSEEVFKTIALPDSI----NSSSFSLELAFLRENIVCISMDKQYISEEADN------ 67
            FD  +E+F  I LPDS       S+++ E++++    + I +    I+    N      
Sbjct: 253 FFDTGDEIFHHILLPDSFYMYEEGSAYAYEMSYIMYTDLRIILWNGSIALFGINRFSALP 312

Query: 66  WCFDLWMMNEY-GIKASWTKLYT 1
             + +W+++++ G   SWTK  T
Sbjct: 313 ESYGVWVLDDFDGANGSWTKHLT 335


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score =  109 bits (273), Expect = 7e-22
 Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 26/314 (8%)
 Frame = -3

Query: 864 LPVASLLRFKLVCVSWYHLIKNSDFVAQHLFHHHYQKSNNNIN---FILHSSNP------ 712
           LPV SLL+++ VC SW+ LI NS F++ H+  +H  + NN ++    +   S P      
Sbjct: 17  LPVKSLLKYRCVCQSWHSLITNSSFISTHI--NHSIECNNRVHSYALVKQKSVPDCKERF 74

Query: 711 -LFPFEDS-SHPSRNTSCTCLLSADKFKVLDLPYCRSWVYRGPTIVASFDGIICLRHD-- 544
            L+  +DS   P R            ++ LD P+      R   I++S +G++CL     
Sbjct: 75  ILYIDDDSGDEPFR-----------VYQELDFPFKGE---RYLEIISSCNGLVCLSDSQY 120

Query: 543 FDVYLWNPATKQFRAVISSELSGEFHFGFGYDVKGKDYKLVR-FHSEVNSDIPAFVHVYD 367
              YLWNP  ++   ++SS+ S  F  GFG++ K  DYK+V+  H     +    V +YD
Sbjct: 121 ARFYLWNPVIRKCLTILSSDSS--FIVGFGFEYKKNDYKVVKIMHHPEKMNPVLIVKIYD 178

Query: 366 FCTDTWRAIIDKILPTMESIEYSGPIAPYRSGIYCWLGLL---DYTTYSHTILSFDFSEE 196
             T  WR+I  +   T+ +  +      Y +G++ WL      + +    T+ SFD  +E
Sbjct: 179 LSTSAWRSITVE-NRTLLNFCFGDRKRAYSNGVFHWLARAPGKEGSPDKLTLASFDLGDE 237

Query: 195 VFKTIALPDSI-NSSSFSLELAFLRENIVCISMDKQYISEEADNWCFDL--------WMM 43
           VF+ +  PD +   +   L L    E++  +    Q++S ++D++ + L        W++
Sbjct: 238 VFREMMFPDDLAQVNENHLSLVVYGESLALL----QHLSWKSDDFSWSLGYYESCCIWVL 293

Query: 42  NEYGIKASWTKLYT 1
            ++G   SW+K YT
Sbjct: 294 KKHGEGRSWSKQYT 307


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