BLASTX nr result

ID: Aconitum21_contig00024394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024394
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32617.3| unnamed protein product [Vitis vinifera]              206   5e-51
ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-lik...   206   5e-51
ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|2...   204   2e-50
gb|ACG43435.1| RHL2 [Zea mays]                                        204   2e-50
ref|NP_001141583.1| uncharacterized protein LOC100273699 [Zea ma...   204   2e-50

>emb|CBI32617.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  206 bits (524), Expect = 5e-51
 Identities = 115/238 (48%), Positives = 150/238 (63%), Gaps = 12/238 (5%)
 Frame = +1

Query: 130 GCVLRPFDVVTKEPAPGLLAGRLVFKQGKFTVDCSKWSSGGALIPYMVQDKIQIISSDAL 309
           GC     +V+  E   G++ GRL+F      +DC+K   GG  IP  + D++  + SDAL
Sbjct: 230 GCTRSSLNVIASEK--GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI-DRVGDMQSDAL 286

Query: 310 FILVVENTSAFKLLVLKRFYDQFPCIIITSEKASPDMGTRMFLKLLYTELNLPVLALVDS 489
           FIL+VE  +A+  L   RFY++FPCII+T+ K  PD+ TR+FL+ + TEL LPVLALVDS
Sbjct: 287 FILLVEKDAAYIRLAEDRFYNRFPCIIVTA-KGQPDVATRLFLRKMKTELKLPVLALVDS 345

Query: 490 TAQGLRSLYSY------------NLHISDIKWLGMRPSDLNKHGMPESQRLRMKRKDIKI 633
              GL+ L  Y            NL   DIKWLG+RPSDL+K+ +PE  RL M  +DIK 
Sbjct: 346 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMTEQDIKT 405

Query: 634 VEGLLKNKSVMKNQGWVDEFNSMLSTKQMAVIEAFSVFDFFYLWKVYLPLMLQEQDWL 807
            + LL+   V KN GWV+E N M+ TKQ A I+A S F F YL +VYLPL LQ+QDWL
Sbjct: 406 GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 463


>ref|XP_002274790.1| PREDICTED: DNA topoisomerase 6 subunit A-like [Vitis vinifera]
          Length = 420

 Score =  206 bits (524), Expect = 5e-51
 Identities = 115/238 (48%), Positives = 150/238 (63%), Gaps = 12/238 (5%)
 Frame = +1

Query: 130 GCVLRPFDVVTKEPAPGLLAGRLVFKQGKFTVDCSKWSSGGALIPYMVQDKIQIISSDAL 309
           GC     +V+  E   G++ GRL+F      +DC+K   GG  IP  + D++  + SDAL
Sbjct: 187 GCTRSSLNVIASEK--GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI-DRVGDMQSDAL 243

Query: 310 FILVVENTSAFKLLVLKRFYDQFPCIIITSEKASPDMGTRMFLKLLYTELNLPVLALVDS 489
           FIL+VE  +A+  L   RFY++FPCII+T+ K  PD+ TR+FL+ + TEL LPVLALVDS
Sbjct: 244 FILLVEKDAAYIRLAEDRFYNRFPCIIVTA-KGQPDVATRLFLRKMKTELKLPVLALVDS 302

Query: 490 TAQGLRSLYSY------------NLHISDIKWLGMRPSDLNKHGMPESQRLRMKRKDIKI 633
              GL+ L  Y            NL   DIKWLG+RPSDL+K+ +PE  RL M  +DIK 
Sbjct: 303 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYSIPEQCRLPMTEQDIKT 362

Query: 634 VEGLLKNKSVMKNQGWVDEFNSMLSTKQMAVIEAFSVFDFFYLWKVYLPLMLQEQDWL 807
            + LL+   V KN GWV+E N M+ TKQ A I+A S F F YL +VYLPL LQ+QDWL
Sbjct: 363 GKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 420


>ref|XP_002326329.1| predicted protein [Populus trichocarpa] gi|222833522|gb|EEE71999.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score =  204 bits (518), Expect = 2e-50
 Identities = 114/238 (47%), Positives = 150/238 (63%), Gaps = 12/238 (5%)
 Frame = +1

Query: 130 GCVLRPFDVVTKEPAPGLLAGRLVFKQGKFTVDCSKWSSGGALIPYMVQDKIQIISSDAL 309
           GC     +V+  E   G++ GRL+F      +DC+K   GG  IP  + D++  + SDAL
Sbjct: 190 GCTRSSLNVIAAEK--GVVVGRLIFSDNGDMIDCTKMGMGGKAIPPNI-DRVGDMQSDAL 246

Query: 310 FILVVENTSAFKLLVLKRFYDQFPCIIITSEKASPDMGTRMFLKLLYTELNLPVLALVDS 489
           FIL+VE  +A+  L   RFY++FPCII+T+ K  PD+ TR+FL+ + TEL LPVLALVDS
Sbjct: 247 FILLVEKDAAYMRLAEDRFYNRFPCIIVTA-KGQPDVATRLFLRKMKTELKLPVLALVDS 305

Query: 490 TAQGLRSLYSY------------NLHISDIKWLGMRPSDLNKHGMPESQRLRMKRKDIKI 633
              GL+ L  Y            NL   DIKWLG+RPSDL+K+ +PE  RL M  +DIK 
Sbjct: 306 DPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYKIPEQCRLPMTEQDIKT 365

Query: 634 VEGLLKNKSVMKNQGWVDEFNSMLSTKQMAVIEAFSVFDFFYLWKVYLPLMLQEQDWL 807
            + LL+   V KN GWV+E + M+ TKQ A I+A S F F YL +VYLPL LQ+QDWL
Sbjct: 366 GKDLLEEDFVKKNPGWVEELSLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQQDWL 423


>gb|ACG43435.1| RHL2 [Zea mays]
          Length = 436

 Score =  204 bits (518), Expect = 2e-50
 Identities = 118/238 (49%), Positives = 148/238 (62%), Gaps = 12/238 (5%)
 Frame = +1

Query: 130 GCVLRPFDVVTKEPAPGLLAGRLVFKQGKFTVDCSKWSSGGALIPYMVQDKIQIISSDAL 309
           GC      VV  E   G++ GRLVF      +DC++   GG  IP  V D++  I SDAL
Sbjct: 203 GCTRSSLHVVASEK--GVVVGRLVFADDGDRIDCTRMGVGGKAIPPNV-DRVSGIESDAL 259

Query: 310 FILVVENTSAFKLLVLKRFYDQFPCIIITSEKASPDMGTRMFLKLLYTELNLPVLALVDS 489
           FIL+VE  +AF  L   RFY++FPCII+T+ K  PD+ TR+FL+ L  EL LPVLALVDS
Sbjct: 260 FILLVEKDAAFMRLAEDRFYNRFPCIILTA-KGQPDVATRLFLRRLKVELKLPVLALVDS 318

Query: 490 TAQGLRSLYSY------------NLHISDIKWLGMRPSDLNKHGMPESQRLRMKRKDIKI 633
              GL+ L  Y            NL   DIKWLG+RPSDL+K+ +PE  RL M   DIK+
Sbjct: 319 DPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKV 378

Query: 634 VEGLLKNKSVMKNQGWVDEFNSMLSTKQMAVIEAFSVFDFFYLWKVYLPLMLQEQDWL 807
            + LL+   V +N+GWV E  +ML TKQ A I+A S F F YL +VYLPL LQEQDW+
Sbjct: 379 GKELLEEDFVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQEQDWI 436


>ref|NP_001141583.1| uncharacterized protein LOC100273699 [Zea mays]
           gi|194705154|gb|ACF86661.1| unknown [Zea mays]
           gi|414866232|tpg|DAA44789.1| TPA: RHL2 [Zea mays]
          Length = 436

 Score =  204 bits (518), Expect = 2e-50
 Identities = 118/238 (49%), Positives = 148/238 (62%), Gaps = 12/238 (5%)
 Frame = +1

Query: 130 GCVLRPFDVVTKEPAPGLLAGRLVFKQGKFTVDCSKWSSGGALIPYMVQDKIQIISSDAL 309
           GC      VV  E   G++ GRLVF      +DC++   GG  IP  V D++  I SDAL
Sbjct: 203 GCTRSSLHVVASEK--GVVVGRLVFADDGDRIDCTRMGVGGKAIPPNV-DRVSGIESDAL 259

Query: 310 FILVVENTSAFKLLVLKRFYDQFPCIIITSEKASPDMGTRMFLKLLYTELNLPVLALVDS 489
           FIL+VE  +AF  L   RFY++FPCII+T+ K  PD+ TR+FL+ L  EL LPVLALVDS
Sbjct: 260 FILLVEKDAAFMRLAEDRFYNRFPCIILTA-KGQPDVATRLFLRRLKVELKLPVLALVDS 318

Query: 490 TAQGLRSLYSY------------NLHISDIKWLGMRPSDLNKHGMPESQRLRMKRKDIKI 633
              GL+ L  Y            NL   DIKWLG+RPSDL+K+ +PE  RL M   DIK+
Sbjct: 319 DPYGLKILSVYMCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYRVPEQCRLPMTDHDIKV 378

Query: 634 VEGLLKNKSVMKNQGWVDEFNSMLSTKQMAVIEAFSVFDFFYLWKVYLPLMLQEQDWL 807
            + LL+   V +N+GWV E  +ML TKQ A I+A S F F YL +VYLPL LQEQDW+
Sbjct: 379 GKELLEEDFVKQNEGWVKELETMLRTKQKAEIQALSSFGFQYLTEVYLPLKLQEQDWI 436


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