BLASTX nr result

ID: Aconitum21_contig00024213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024213
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524463.1| nucleic acid binding protein, putative [Rici...    78   2e-12
emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]    76   5e-12
emb|CBI28171.3| unnamed protein product [Vitis vinifera]               75   8e-12
ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containin...    60   3e-07
ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containin...    59   6e-07

>ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536251|gb|EEF37903.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 530

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 46/97 (47%), Positives = 65/97 (67%), Gaps = 3/97 (3%)
 Frame = -2

Query: 637 SRLQEREK-RRQVRPEFISSEISRGKTDSQDSRLTQESSTAFTGPKTLAQIKEEKLQAKE 461
           +R ++R+K RR  R + +SSE+ R     +  R + ++ST FTGPKTLAQIKEEK +A+E
Sbjct: 435 NRSRQRDKERRLARKQSLSSEVLRKPASKE--RKSSQASTQFTGPKTLAQIKEEKKKAEE 492

Query: 460 NRGGFGSTAGNTMLQT--FEGPRPLSEILKKKRKSTS 356
           N    G T  ++ + T  FE P+PLSEILK KR+ +S
Sbjct: 493 NGDYTGKTDNSSRMATADFESPKPLSEILKDKRRPSS 529


>emb|CAN63504.1| hypothetical protein VITISV_011679 [Vitis vinifera]
          Length = 554

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 2/102 (1%)
 Frame = -2

Query: 640 QSRLQEREKRRQVRPEFISSEISRGKTDSQDSRLTQESSTAFTGPKTLAQIKEEKLQAKE 461
           +SR   +EK    R + ISSE SR     +  R++    T FTGPK+LAQIKEEK +A+E
Sbjct: 452 KSRQHYKEKGHSQR-QHISSEDSRKPVSRE--RISTREYTTFTGPKSLAQIKEEKRKAEE 508

Query: 460 NRGGFGST--AGNTMLQTFEGPRPLSEILKKKRKSTSNDSGS 341
           N  GFG    + NT    F+GP+PLSEILK KRK  S   G+
Sbjct: 509 NGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRKLGSAMDGN 550


>emb|CBI28171.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score = 75.5 bits (184), Expect = 8e-12
 Identities = 47/94 (50%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
 Frame = -2

Query: 640 QSRLQEREKRRQVRPEFISSEISRGKTDSQDSRLTQESSTAFTGPKTLAQIKEEKLQAKE 461
           +SR   +EK    R + ISSE SR     +  R++    T FTGPK+LAQIKEEK +A+E
Sbjct: 416 KSRQHYKEKGHSQR-QHISSEDSRKPVSRE--RISTREYTTFTGPKSLAQIKEEKRKAEE 472

Query: 460 NRGGFGST--AGNTMLQTFEGPRPLSEILKKKRK 365
           N  GFG    + NT    F+GP+PLSEILK KRK
Sbjct: 473 NGEGFGKMGYSSNTPSADFQGPKPLSEILKDKRK 506


>ref|XP_003550828.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 526

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 5/99 (5%)
 Frame = -2

Query: 649 MYTQSRLQEREKRRQV-----RPEFISSEISRGKTDSQDSRLTQESSTAFTGPKTLAQIK 485
           ++ QS+ Q+   R+       + +F+SS+ISR     Q   L  ESST F+GPKTLA+IK
Sbjct: 430 LFRQSQAQQHRPRKNYIEKLPKRQFVSSKISRKPVFKQRG-LIHESST-FSGPKTLAEIK 487

Query: 484 EEKLQAKENRGGFGSTAGNTMLQTFEGPRPLSEILKKKR 368
           EEK++    +   GS    +    F+ P+PLSEILK KR
Sbjct: 488 EEKMK----KNAEGSLHWKSTSTDFQDPKPLSEILKVKR 522


>ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
           [Glycine max]
          Length = 524

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
 Frame = -2

Query: 649 MYTQSRLQEREKRRQVRP-----EFISSEISRGKTDSQDSRLTQESSTAFTGPKTLAQIK 485
           ++  S+ Q+ + R+  R      +F+SS+ISR     Q   + + S  AF+GPKTLA+IK
Sbjct: 429 LFRHSQAQQHKPRKHYREKLPKRQFLSSKISRKPAFKQRGFIHEFS--AFSGPKTLAEIK 486

Query: 484 EEKLQAKENRGGFGSTAGNTMLQTFEGPRPLSEILKKKR 368
           EEK++  E     GS    +    F+ P+PLSEILK KR
Sbjct: 487 EEKMKKAE-----GSLHWKSTSTDFQDPKPLSEILKDKR 520


Top