BLASTX nr result

ID: Aconitum21_contig00024210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00024210
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis...    97   2e-18
emb|CBI22299.3| unnamed protein product [Vitis vinifera]               97   2e-18
ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_002526100.1| pearli, putative [Ricinus communis] gi|22353...    82   5e-14
ref|NP_001190317.1| cohesin loading factor subunit SCC2 [Arabido...    81   1e-13

>ref|XP_002279278.2| PREDICTED: nipped-B-like protein-like [Vitis vinifera]
          Length = 1967

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/64 (68%), Positives = 55/64 (85%)
 Frame = -3

Query: 194 LPNTIHSEVAPSLPLPSLPIFCGASDQEIRLLDEKSSKRSIDRKEVVAQAGRIAELLHET 15
           L NTIHSEVAP LPLPSLP+FCGA DQE+RL DE  + RS++R++V++QA RIA+LL ET
Sbjct: 23  LSNTIHSEVAPCLPLPSLPVFCGAYDQELRLFDEPRNARSLNRRDVISQASRIADLLRET 82

Query: 14  DVSY 3
           D+SY
Sbjct: 83  DISY 86


>emb|CBI22299.3| unnamed protein product [Vitis vinifera]
          Length = 1748

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/64 (68%), Positives = 55/64 (85%)
 Frame = -3

Query: 194 LPNTIHSEVAPSLPLPSLPIFCGASDQEIRLLDEKSSKRSIDRKEVVAQAGRIAELLHET 15
           L NTIHSEVAP LPLPSLP+FCGA DQE+RL DE  + RS++R++V++QA RIA+LL ET
Sbjct: 23  LSNTIHSEVAPCLPLPSLPVFCGAYDQELRLFDEPRNARSLNRRDVISQASRIADLLRET 82

Query: 14  DVSY 3
           D+SY
Sbjct: 83  DISY 86


>ref|XP_002324104.1| predicted protein [Populus trichocarpa] gi|222867106|gb|EEF04237.1|
           predicted protein [Populus trichocarpa]
          Length = 1815

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 41/68 (60%), Positives = 54/68 (79%), Gaps = 4/68 (5%)
 Frame = -3

Query: 194 LPNTIHSEVAPSLPLPSLPIFCGASDQEIRLLDEKSSKRS----IDRKEVVAQAGRIAEL 27
           L N+IHSEVAP LPLPSLP+FCGASD E+RL D  S++ S    ++R E+++Q+ RIA+L
Sbjct: 20  LSNSIHSEVAPCLPLPSLPVFCGASDPELRLFDGASARNSNFWFLNRNEILSQSSRIADL 79

Query: 26  LHETDVSY 3
           L +TDVSY
Sbjct: 80  LRQTDVSY 87


>ref|XP_002526100.1| pearli, putative [Ricinus communis] gi|223534597|gb|EEF36294.1|
           pearli, putative [Ricinus communis]
          Length = 1758

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
 Frame = -3

Query: 194 LPNTIHSEVAPSLPLPSLPIFCGASDQEIRLLDEKSSKR--SIDRKEVVAQAGRIAELLH 21
           L NTIHSEVAP LPLPS+P+FCGASD  ++L D+ + +   S++R E+++QA RIA+LL 
Sbjct: 26  LSNTIHSEVAPCLPLPSVPVFCGASDPNLKLFDDGNIRGVWSLNRTEIISQASRIADLLR 85

Query: 20  ETDVSY 3
            TDVSY
Sbjct: 86  HTDVSY 91


>ref|NP_001190317.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana]
           gi|332004792|gb|AED92175.1| cohesin loading factor
           subunit SCC2 [Arabidopsis thaliana]
          Length = 1844

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 42/68 (61%), Positives = 51/68 (75%), Gaps = 4/68 (5%)
 Frame = -3

Query: 194 LPNTIHSEVAPSLPLPSLPIFCGASDQ-EIRLLDE---KSSKRSIDRKEVVAQAGRIAEL 27
           L NT+ SEV P LPLPSLPIFCGA++  E +L DE    S  RS+DR E++AQ+ RIA +
Sbjct: 22  LANTVQSEVTPYLPLPSLPIFCGAAEPGEFKLFDEVGQGSGYRSLDRSEILAQSSRIANM 81

Query: 26  LHETDVSY 3
           LHETDVSY
Sbjct: 82  LHETDVSY 89


Top