BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023950
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    70   3e-22
emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]    76   3e-19
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]    60   1e-18
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]    60   1e-18
emb|CAN73240.1| hypothetical protein VITISV_035336 [Vitis vinifera]    60   2e-18

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score = 70.5 bits (171), Expect(3) = 3e-22
 Identities = 34/56 (60%), Positives = 46/56 (82%)
 Frame = +1

Query: 1    YMKTSIDHCVFLKRFASDDFIDLLLHVDNMLIVGQDIRKISKLKKDLARSFEMKDL 168
            Y+KT  D CV+ KRF+ ++FI LLL+VD+MLIVG+D   I+KLK DL++SF+MKDL
Sbjct: 983  YLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDL 1038



 Score = 44.3 bits (103), Expect(3) = 3e-22
 Identities = 24/57 (42%), Positives = 35/57 (61%)
 Frame = +3

Query: 150  FRNEGFGHVMQILGMQIVRDRRHDKLMFSKER*IDKVLKMFIMDQAKSVTCTSSPHV 320
            F  +  G   QILGM+IVR+R   KL  S+E+ I++VL+ F M  AK V+   + H+
Sbjct: 1033 FDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHL 1089



 Score = 35.0 bits (79), Expect(3) = 3e-22
 Identities = 17/23 (73%), Positives = 18/23 (78%)
 Frame = +2

Query: 371  AKVLYVYAVSSPMYAIVCTRPDI 439
            AKV Y  AV S MYA+VCTRPDI
Sbjct: 1107 AKVPYSSAVGSLMYAMVCTRPDI 1129


>emb|CAN76397.1| hypothetical protein VITISV_001411 [Vitis vinifera]
          Length = 384

 Score = 76.3 bits (186), Expect(2) = 3e-19
 Identities = 35/56 (62%), Positives = 45/56 (80%)
 Frame = +1

Query: 1   YMKTSIDHCVFLKRFASDDFIDLLLHVDNMLIVGQDIRKISKLKKDLARSFEMKDL 168
           Y +T+ DHCVF KRF+ DDFI LLL+VD+MLI+  D  KI KLK++L++SF MKDL
Sbjct: 151 YNRTTSDHCVFTKRFSDDDFIILLLYVDDMLIIDHDASKIEKLKRELSKSFAMKDL 206



 Score = 43.5 bits (101), Expect(2) = 3e-19
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = +3

Query: 150 FRNEGFGHVMQILGMQIVRDRRHDKLMFSKER*IDKVLKMFIMDQAKSVTCTSSPH 317
           F  +  G+  QILGM+I  DR+++KL  S+E  I+K+L+ F + +AK V    + H
Sbjct: 201 FAMKDLGYAKQILGMKISHDRKNEKLWLSQEAYIEKILERFNISKAKIVGSPLAGH 256


>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
          Length = 1279

 Score = 60.5 bits (145), Expect(3) = 1e-18
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = +1

Query: 1    YMKTSIDHCVFLKRFASDDFIDLLLHVDNMLIVGQDIRKISKLKKDLARSFEMKDL 168
            + +   DHC ++K F  + +I LLL+VD+MLIVG DI KI+ LKK L++ F MKDL
Sbjct: 936  FKRCEADHCCYVKSF-DNSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDL 990



 Score = 40.8 bits (94), Expect(3) = 1e-18
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 150  FRNEGFGHVMQILGMQIVRDRRHDKLMFSKER*IDKVLKMFIMDQAKSVTCTSSPH 317
            F  +  G   QILGM+I+RD+ +  L  S+   + KVL  F M++AK V+     H
Sbjct: 985  FAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSH 1040



 Score = 36.2 bits (82), Expect(3) = 1e-18
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +2

Query: 344  RNEEGIKRWAKVLYVYAVSSPMYAIVCTRPDI 439
            + EE     +KV Y  A+ S MYA+VCTRPDI
Sbjct: 1050 KTEEERDHMSKVPYASAIGSLMYAMVCTRPDI 1081


>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
          Length = 1222

 Score = 60.5 bits (145), Expect(3) = 1e-18
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = +1

Query: 1    YMKTSIDHCVFLKRFASDDFIDLLLHVDNMLIVGQDIRKISKLKKDLARSFEMKDL 168
            + +   DHC ++K F  + +I LLL+VD+MLIVG DI KI+ LKK L++ F MKDL
Sbjct: 879  FKRCEADHCCYVKSF-DNSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDL 933



 Score = 40.8 bits (94), Expect(3) = 1e-18
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 150  FRNEGFGHVMQILGMQIVRDRRHDKLMFSKER*IDKVLKMFIMDQAKSVTCTSSPH 317
            F  +  G   QILGM+I+RD+ +  L  S+   + KVL  F M++AK V+     H
Sbjct: 928  FAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSH 983



 Score = 36.2 bits (82), Expect(3) = 1e-18
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +2

Query: 344  RNEEGIKRWAKVLYVYAVSSPMYAIVCTRPDI 439
            + EE     +KV Y  A+ S MYA+VCTRPDI
Sbjct: 993  KTEEERDHMSKVPYASAIGSLMYAMVCTRPDI 1024


>emb|CAN73240.1| hypothetical protein VITISV_035336 [Vitis vinifera]
          Length = 1244

 Score = 60.5 bits (145), Expect(3) = 2e-18
 Identities = 29/56 (51%), Positives = 40/56 (71%)
 Frame = +1

Query: 1    YMKTSIDHCVFLKRFASDDFIDLLLHVDNMLIVGQDIRKISKLKKDLARSFEMKDL 168
            + +   DHC ++K F  + +I LLL+VD+MLIVG DI KI+ LKK L++ F MKDL
Sbjct: 901  FKRCEADHCCYVKSF-DNSYIILLLYVDDMLIVGSDIEKINNLKKQLSKQFAMKDL 955



 Score = 40.8 bits (94), Expect(3) = 2e-18
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 150  FRNEGFGHVMQILGMQIVRDRRHDKLMFSKER*IDKVLKMFIMDQAKSVTCTSSPH 317
            F  +  G   QILGM+I+RD+ +  L  S+   + KVL  F M++AK V+     H
Sbjct: 950  FAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSH 1005



 Score = 35.8 bits (81), Expect(3) = 2e-18
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = +2

Query: 344  RNEEGIKRWAKVLYVYAVSSPMYAIVCTRPDI 439
            + EE     +KV Y  A+ S MYA+VCTRPDI
Sbjct: 1015 KTEEERDXMSKVPYASAIGSLMYAMVCTRPDI 1046