BLASTX nr result

ID: Aconitum21_contig00023906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023906
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related prote...    65   8e-09
ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-...    60   2e-07
emb|CBI20795.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...    60   2e-07
ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-...    59   3e-07

>sp|Q2ABE5.1|RBR_CAMSI RecName: Full=Retinoblastoma-related protein
           gi|89111303|dbj|BAE80326.1| retinoblastoma related
           protein [Camellia sinensis]
          Length = 1025

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 30/56 (53%), Positives = 39/56 (69%)
 Frame = -2

Query: 197 QSIQVSLSPLCSPAFSPTKGLHIGANMKMAPTPVSTTMITAKWLLTVVSSLPSKPS 30
           ++I   L+P CSP+ S  K +  G+N KMA TPV+T M TAKWL T++S LP KPS
Sbjct: 391 RTITSPLAPYCSPSASHAKAIPCGSNSKMAATPVTTAMTTAKWLRTIISPLPPKPS 446


>ref|XP_003546699.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1002

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/56 (60%), Positives = 38/56 (67%)
 Frame = -2

Query: 197 QSIQVSLSPLCSPAFSPTKGLHIGANMKMAPTPVSTTMITAKWLLTVVSSLPSKPS 30
           ++I   LSP  SP  S T G+   AN KMA TPVST M TAKWL TV+S LPSKPS
Sbjct: 374 KTITSPLSPHRSPT-SHTNGIPGSANSKMAATPVSTAMTTAKWLRTVISPLPSKPS 428


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/49 (69%), Positives = 37/49 (75%)
 Frame = -2

Query: 176 SPLCSPAFSPTKGLHIGANMKMAPTPVSTTMITAKWLLTVVSSLPSKPS 30
           SPL SP  SP  G+  GAN KMAPTPV+T M TAKWL TV+S LPSKPS
Sbjct: 384 SPL-SPNRSP--GILGGANSKMAPTPVTTAMTTAKWLRTVISPLPSKPS 429


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
           gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
           Full=Retinoblastoma-related protein
           gi|359392418|gb|AEV45768.1| RBR protein [Vitis
           pseudoreticulata]
          Length = 1007

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/49 (69%), Positives = 37/49 (75%)
 Frame = -2

Query: 176 SPLCSPAFSPTKGLHIGANMKMAPTPVSTTMITAKWLLTVVSSLPSKPS 30
           SPL SP  SP  G+  GAN KMAPTPV+T M TAKWL TV+S LPSKPS
Sbjct: 385 SPL-SPNRSP--GILGGANSKMAPTPVTTAMTTAKWLRTVISPLPSKPS 430


>ref|XP_003522419.1| PREDICTED: retinoblastoma-related protein 1-like [Glycine max]
          Length = 1014

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/56 (60%), Positives = 38/56 (67%)
 Frame = -2

Query: 197 QSIQVSLSPLCSPAFSPTKGLHIGANMKMAPTPVSTTMITAKWLLTVVSSLPSKPS 30
           ++I   LSP  SPA S   G+   AN KMA TPVST M TAKWL TV+S LPSKPS
Sbjct: 384 KTITSPLSPHRSPA-SHANGIPGSANSKMAATPVSTAMTTAKWLRTVISPLPSKPS 438


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