BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023898
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop...   209   1e-51
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   202   9e-50
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   201   3e-49
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   197   3e-48
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   196   1e-47

>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
          Length = 1152

 Score =  209 bits (531), Expect = 1e-51
 Identities = 112/295 (37%), Positives = 159/295 (53%), Gaps = 3/295 (1%)
 Frame = +1

Query: 91  ATMTETTKRAVSNFGSHFYLHPSDHPGLNICPVSLKGDNYQEWNDAIRNAFIAKQKLGFI 270
           AT   + K A+S   S +YLHPSDHP   + P+ L G+NY+ W    RN   AKQKLGFI
Sbjct: 10  ATTASSEKDAIS--ASPYYLHPSDHPHHVLTPMLLNGENYERWAKLTRNNLQAKQKLGFI 67

Query: 271 DGTISKPAPTTANLTDWSMNNSMLIGWTMQSIDPTL*SSITYHETVKKLWDDLKQRFSVG 450
           DGT++KP+  + +   W   NSML+GW   S+DP +  SI+  +  + +W+ L+ R+SVG
Sbjct: 68  DGTLTKPSSDSPDYPRWLQTNSMLVGWLYASLDPQVQKSISVVDNARVMWESLRTRYSVG 127

Query: 451 NGPRKLQLRAEIATHRQTGQXXXXXXXXXXXXWDELFNYSPHRLCTCGKCECNLNKFLTS 630
           N  R  QL+ +I   RQ GQ            WD+L +Y P   C C +  C      + 
Sbjct: 128 NASRVHQLKYDIVACRQDGQTAANYFGKLKVMWDDLDDYEPLLTCCCNRPSCTHRVRQSQ 187

Query: 631 EREEERIHQFLIGLEDATSSSLRSNILAQESLPNE---SRIYALAVQEERLKTIVTSRDL 801
            R+ ERIHQFL+GL+ A   + R+NIL + S  +      IY+  + EER  TI  S++ 
Sbjct: 188 RRDHERIHQFLMGLDAAKFGTSRTNILGRLSRDDNISLDSIYSEIIAEERHLTITRSKEE 247

Query: 802 PTDNLSLAARCFGPSSKDPSPVDKRSFLCTHCGKQGHDVSTCFKIHGILEWVQPK 966
             D +  A +    +    + V+     CTHCG+  H   TCFK+HG+ EW   K
Sbjct: 248 RVDAVGFAVQTGVNAIASVTRVNNMG-PCTHCGRSNHSADTCFKLHGVPEWYTEK 301


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  202 bits (515), Expect = 9e-50
 Identities = 108/296 (36%), Positives = 157/296 (53%), Gaps = 5/296 (1%)
 Frame = +1

Query: 82  VRPATMTETTKRAVSNFGSHFYLHPSDHPGLNICPVSLKGDNYQEWNDAIRNAFIAKQKL 261
           V  AT   T ++      S + L  SD+PG  I  V L GDNY EW+  + NA  AK+K 
Sbjct: 7   VSSATHPRTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKT 66

Query: 262 GFIDGTISKPAPTTANLTDWSMNNSMLIGWTMQSIDPTL*SSITYHETVKKLWDDLKQRF 441
           GFI+G+ISKP     +  +W   NSM++GW   SI+P + S++T+     +LW +LKQRF
Sbjct: 67  GFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKSTVTFISDAHQLWSELKQRF 126

Query: 442 SVGNGPRKLQLRAEIATHRQTGQXXXXXXXXXXXXWDELFNYSPHRLCTCGKCECNLNKF 621
           SVGN  R  Q++A++A  RQ GQ            W+E   Y P  +C CG C C     
Sbjct: 127 SVGNKVRVHQIKAQLAACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLE 186

Query: 622 LTSEREEERIHQFLIGLEDATSSSLRSNILAQESLPNESRIYALAVQEERLKTIVTSRDL 801
            + EREEE+IHQF++GL+D+    L + ++A +  P+   IY+  V+EE+    V  R+ 
Sbjct: 187 PSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQ 246

Query: 802 PTDNLSLAAR-----CFGPSSKDPSPVDKRSFLCTHCGKQGHDVSTCFKIHGILEW 954
               +    R       G +         RS LC+HCG+ GH+   C++I G  +W
Sbjct: 247 QQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDW 302


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  201 bits (511), Expect = 3e-49
 Identities = 112/289 (38%), Positives = 171/289 (59%), Gaps = 1/289 (0%)
 Frame = +1

Query: 91  ATMTETTKRAVSNFGSHFYLHPSDHPGLNICPVSLKGDNYQEWNDAIRNAFIAKQKLGFI 270
           A +T T+    S+  ++  ++ SD+PG  I  V LK +NY EW++ ++N   AKQKLGFI
Sbjct: 6   ALVTSTSSSNTSSTTAYL-INASDNPGALISSVVLKENNYAEWSEELQNFLRAKQKLGFI 64

Query: 271 DGTISKPAPTTANLTDWSMNNSMLIGWTMQSIDPTL*SSITYHETVKKLWDDLKQRFSVG 450
           DG+I KPA     L+ W   NSM++GW   SIDPT+ S++ +     +LW++L++RFSVG
Sbjct: 65  DGSIPKPA-ADPELSLWIAINSMIVGWIRTSIDPTIRSTVGFVSEASQLWENLRRRFSVG 123

Query: 451 NGPRKLQLRAEIATHRQTGQXXXXXXXXXXXXWDELFNYSPHRLCTCGKCECNLNKFLTS 630
           NG RK  L+ EIA   Q GQ            W+EL NY   R     +C+C     +  
Sbjct: 124 NGVRKTLLKDEIAACTQDGQPVLAYYGRLIKLWEELQNYKSGR-----ECKCEAASDIEK 178

Query: 631 EREEERIHQFLIGLEDATSSSLRSNILAQESLPNESRIYALAVQEERLKTIVTSRD-LPT 807
           ERE++R+H+FL+GL D+  SS+RS+I   E LP+  ++Y+  V+EE+      ++D + T
Sbjct: 179 EREDDRVHKFLLGL-DSRFSSIRSSITDIEPLPDLYQVYSRVVREEQNLNASRTKDVVKT 237

Query: 808 DNLSLAARCFGPSSKDPSPVDKRSFLCTHCGKQGHDVSTCFKIHGILEW 954
           + +  + +    SS  P   DK +  CTHC ++GH+V+ CF +HG  +W
Sbjct: 238 EAIGFSVQ----SSTTPRFRDKSTLFCTHCNRKGHEVTQCFLVHGYPDW 282


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  197 bits (502), Expect = 3e-48
 Identities = 106/296 (35%), Positives = 155/296 (52%), Gaps = 5/296 (1%)
 Frame = +1

Query: 82  VRPATMTETTKRAVSNFGSHFYLHPSDHPGLNICPVSLKGDNYQEWNDAIRNAFIAKQKL 261
           V  AT   T ++      S + L  SD+PG  I  V L GDNY EW+  + NA  AK+K 
Sbjct: 7   VSSATHPRTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKT 66

Query: 262 GFIDGTISKPAPTTANLTDWSMNNSMLIGWTMQSIDPTL*SSITYHETVKKLWDDLKQRF 441
           GFI+G+ISKP     +  +W   NSM++GW   SI+P + S++T+     +LW +LKQRF
Sbjct: 67  GFINGSISKPPLDNPDYENWQAVNSMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRF 126

Query: 442 SVGNGPRKLQLRAEIATHRQTGQXXXXXXXXXXXXWDELFNYSPHRLCTCGKCECNLNKF 621
           SVGN     Q++ ++A  RQ GQ            W+E   Y P  +C CG C C     
Sbjct: 127 SVGNKVHVHQIKTQLAACRQDGQPVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLE 186

Query: 622 LTSEREEERIHQFLIGLEDATSSSLRSNILAQESLPNESRIYALAVQEERLKTIVTSRDL 801
            + EREEE+IHQF++GL+D+    L + ++A +  P+   IY+  V+EE+    V  R+ 
Sbjct: 187 PSKEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQ 246

Query: 802 PTDNLSLAAR-----CFGPSSKDPSPVDKRSFLCTHCGKQGHDVSTCFKIHGILEW 954
               +    R       G +         RS LC+HCG+ GH+   C++I G  +W
Sbjct: 247 QQSAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDW 302


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  196 bits (497), Expect = 1e-47
 Identities = 105/297 (35%), Positives = 156/297 (52%), Gaps = 16/297 (5%)
 Frame = +1

Query: 136 SHFYLHPSDHPGLNICPVSLKGDNYQEWNDAIRNAFIAKQKLGFIDGTISKPAPTTANLT 315
           S + L  SD+PG  I  V L GDNY +W   + NA  AK+K GFI+GTI +P P   N  
Sbjct: 30  SPYTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYE 89

Query: 316 DWSMNNSMLIGWTMQSIDPTL*SSITYHETVKKLWDDLKQRFSVGNGPRKLQLRAEIATH 495
           +W+  NSM++GW   SI+P + +++T+      LW DLKQRFSVGN  R  Q+RA++++ 
Sbjct: 90  NWTAVNSMIVGWIRTSIEPKVKATVTFISDAHLLWKDLKQRFSVGNKVRIHQIRAQLSSC 149

Query: 496 RQTGQXXXXXXXXXXXXWDELFNYSPHRLCTCGKCECNLNKFLTSEREEERIHQFLIGLE 675
           RQ GQ            W+E   Y P  +CTCG C C      T EREEE+IHQF++GL+
Sbjct: 150 RQDGQAVIEYYGRLSNLWEEYNIYKPVTVCTCGLCRCGATSEPTKEREEEKIHQFVLGLD 209

Query: 676 DATSSSLRSNILAQESLPNESRIYALAVQEERLKTIVTSRDLPTDNLSLAA--------- 828
           ++    L + ++  + LP+   IY+  ++EE+    V  R+   + +   A         
Sbjct: 210 ESRFGGLCATLINMDPLPSLGEIYSRVIREEQRLASVHVREQKEEAVGFLARREQLDHHS 269

Query: 829 RCFGPSSKDPSPVDKRS-------FLCTHCGKQGHDVSTCFKIHGILEWVQPKRDAR 978
           R    SS+       RS         C++CG+ GH+   C++I G  +W   +   R
Sbjct: 270 RVDASSSRSEHTGGSRSNSIIKGRVTCSNCGRTGHEKKECWQIVGFPDWWSERNGGR 326