BLASTX nr result

ID: Aconitum21_contig00023895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023895
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein lig...    58   7e-15
ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein lig...    54   1e-14
ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein lig...    54   1e-14
ref|XP_002520151.1| protein with unknown function [Ricinus commu...    59   3e-14
ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein lig...    58   6e-14

>ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score = 57.8 bits (138), Expect(2) = 7e-15
 Identities = 29/55 (52%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = -1

Query: 418 LGHGDINTFS-YPLEVKSLKSFATTHVFVGWNHFELFSNNGRVFTCGDGAFEKLG 257
           LGHG + + S YP  V SL  +  THV  GW H    S+NG VFTCGDG+F +LG
Sbjct: 83  LGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLG 137



 Score = 47.4 bits (111), Expect(2) = 7e-15
 Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
 Frame = -3

Query: 266 KVGHGDYQSQCYPWKLY-LG*EHVQQIACGLQHTLVLLK-DVVHSFGA 129
           ++GHGD+ S C P K+     +HV+Q+ACG++H+LVLLK + V+ FG+
Sbjct: 135 QLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGS 182


>ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score = 54.3 bits (129), Expect(2) = 1e-14
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = -1

Query: 418 LGHGDINTFSYPLEVKSLKSFATTHVFVGWNHFELFSNNGRVFTCGDGAFEKLG 257
           LG GD+ +  +P  V  L S+  THV  GW+H    S+ G+++TCGDG+F +LG
Sbjct: 296 LGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLG 349



 Score = 49.7 bits (117), Expect(2) = 1e-14
 Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 5/51 (9%)
 Frame = -3

Query: 266 KVGHGDYQSQCYPWK-LYLG*EHVQQIACGLQHTLVLLK----DVVHSFGA 129
           ++GHGDYQ +C+P + L+   +HV +IACG++H+L L+K    + V+ FGA
Sbjct: 347 QLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGA 397


>ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 577

 Score = 54.3 bits (129), Expect(2) = 1e-14
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = -1

Query: 418 LGHGDINTFSYPLEVKSLKSFATTHVFVGWNHFELFSNNGRVFTCGDGAFEKLG 257
           LG GD+ +  +P  V  L S+  THV  GW+H    S+ G+++TCGDG+F +LG
Sbjct: 296 LGLGDMISSLHPKPVMRLGSYFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLG 349



 Score = 49.7 bits (117), Expect(2) = 1e-14
 Identities = 23/51 (45%), Positives = 37/51 (72%), Gaps = 5/51 (9%)
 Frame = -3

Query: 266 KVGHGDYQSQCYPWK-LYLG*EHVQQIACGLQHTLVLLK----DVVHSFGA 129
           ++GHGDYQ +C+P + L+   +HV +IACG++H+L L+K    + V+ FGA
Sbjct: 347 QLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVKGSSGEQVYGFGA 397


>ref|XP_002520151.1| protein with unknown function [Ricinus communis]
           gi|223540643|gb|EEF42206.1| protein with unknown
           function [Ricinus communis]
          Length = 387

 Score = 58.5 bits (140), Expect(2) = 3e-14
 Identities = 26/54 (48%), Positives = 35/54 (64%)
 Frame = -1

Query: 418 LGHGDINTFSYPLEVKSLKSFATTHVFVGWNHFELFSNNGRVFTCGDGAFEKLG 257
           LGHG++ +  +P  V  L SF  TH+  GW+H    S+ G VFTCGDG+F +LG
Sbjct: 88  LGHGNMLSSVHPQPVTFLDSFVITHISAGWSHSGFVSDKGCVFTCGDGSFGQLG 141



 Score = 44.7 bits (104), Expect(2) = 3e-14
 Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
 Frame = -3

Query: 266 KVGHGDYQSQCYPWKL-YLG*EHVQQIACGLQHTLVLLK-DVVHSFGA 129
           ++GHGD  S   P ++ Y    HV QIACG++H+LVLLK + V+ FG+
Sbjct: 139 QLGHGDNNSHATPVQVSYFANRHVHQIACGMRHSLVLLKGNQVYGFGS 186


>ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score = 57.8 bits (138), Expect(2) = 6e-14
 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
 Frame = -1

Query: 418 LGHGDI--NTFSYPLEVKSLKSFATTHVFVGWNHFELFSNNGRVFTCGDGAFEKLG 257
           LGHG++  NT  YP  V SL  +  THV  GW+H    S+ G VFTCGDG+F +LG
Sbjct: 83  LGHGEVVSNTL-YPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLG 137



 Score = 44.3 bits (103), Expect(2) = 6e-14
 Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = -3

Query: 266 KVGHGDYQSQCYPWKLYLG*E-HVQQIACGLQHTLVLLK-DVVHSFGA 129
           ++GHGD  S C P K+    + HV Q+ACG++H+LVLLK + V+ FG+
Sbjct: 135 QLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGS 182


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