BLASTX nr result

ID: Aconitum21_contig00023761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023761
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein ...    41   4e-09
ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein ...    39   8e-07
ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...    41   3e-06
ref|XP_003613438.1| Paired amphipathic helix protein Sin3 [Medic...    42   9e-06

>ref|XP_002281791.2| PREDICTED: paired amphipathic helix protein Sin3-like 2-like [Vitis
            vinifera]
          Length = 1395

 Score = 40.8 bits (94), Expect(3) = 4e-09
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = -1

Query: 330  NGGLEEDHFRIYGDASIVALPKTKGSAASRQFRDRQGK 217
            NG  EED+F +YGDAS  A+P  K S+  RQF+   G+
Sbjct: 963  NGDFEEDNFVVYGDASTQAVPLAKHSSERRQFQAGDGQ 1000



 Score = 32.7 bits (73), Expect(3) = 4e-09
 Identities = 24/59 (40%), Positives = 32/59 (54%)
 Frame = -3

Query: 538  HIEVDVSSSGISTTPARIRHTVIGVGLEPRLNNEALLSKEGSNSTRTPLYANGVLEEGT 362
            H+EV    SG  +TP+R  +  I    E +   +A  S EG +  RT + ANGVL EGT
Sbjct: 885  HMEV---MSGHVSTPSRPGNVAIEEAHEHKPGFDA--SSEGGDVMRTVISANGVLSEGT 938



 Score = 31.6 bits (70), Expect(3) = 4e-09
 Identities = 23/45 (51%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 130  NAFEAGEDVSGSESADGGECSC--XXXXXXXXXXXXXDKAESEGE 2
            N  EAGEDVS SESA G ECS                 KAESEGE
Sbjct: 1022 NVSEAGEDVSASESA-GDECSRGEQEEEEDAEHDELDGKAESEGE 1065


>ref|XP_003519283.1| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Glycine
            max]
          Length = 1407

 Score = 38.5 bits (88), Expect(3) = 8e-07
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = -1

Query: 330  NGGLEEDHFRIYGDASIVALPKTKGSAASRQFRDRQGKHTC 208
            NG  EED+  +YG   + A+ K K    SRQ+++R G+  C
Sbjct: 968  NGDFEEDNSEVYGGNGLDAVHKGKDGGVSRQYQNRHGEEVC 1008



 Score = 30.4 bits (67), Expect(3) = 8e-07
 Identities = 19/36 (52%), Positives = 20/36 (55%)
 Frame = -3

Query: 109  DVSGSESADGGECSCXXXXXXXXXXXXXDKAESEGE 2
            DVSGSESAD  ECS              +KAESEGE
Sbjct: 1042 DVSGSESADAEECS----REEHEDGEHDNKAESEGE 1073



 Score = 28.1 bits (61), Expect(3) = 8e-07
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 514  SGISTTPARIRHTVIGVGLEPRLNNEALLSKEGSNSTRTPLYANGVLEEGT 362
            SG++ TP R  +  +  GL+       + S EG +STR     NG +  GT
Sbjct: 900  SGLTATPTRPGNASVEGGLD-------IPSSEGGDSTRLGTSTNGAITGGT 943


>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
            vinifera]
          Length = 1421

 Score = 40.8 bits (94), Expect(2) = 3e-06
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -1

Query: 330  NGGLEEDHFRIYGDASIVALPKTKGSAASRQFRDRQG 220
            NG  EED+F +YGDA +    K+K +AASRQ++ R G
Sbjct: 972  NGDFEEDNFAVYGDAGVEG--KSKDTAASRQYQTRHG 1006



 Score = 35.0 bits (79), Expect(2) = 3e-06
 Identities = 22/43 (51%), Positives = 24/43 (55%)
 Frame = -3

Query: 130  NAFEAGEDVSGSESADGGECSCXXXXXXXXXXXXXDKAESEGE 2
            NA E G DVSGSES +G ECS              +KAESEGE
Sbjct: 1040 NASENG-DVSGSESGEGEECSREEHEEDGDHDEHDNKAESEGE 1081


>ref|XP_003613438.1| Paired amphipathic helix protein Sin3 [Medicago truncatula]
            gi|355514773|gb|AES96396.1| Paired amphipathic helix
            protein Sin3 [Medicago truncatula]
          Length = 1513

 Score = 41.6 bits (96), Expect(2) = 9e-06
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = -1

Query: 330  NGGLEEDHFRIYGDASIVALPKTKGSAASRQFRDRQGKHTC 208
            NG  EED+F +YGDA   A+ K       RQ+++R+G+  C
Sbjct: 1076 NGDFEEDNFAVYGDAGSEAVHKGNDGGLKRQYQNRRGEEVC 1116



 Score = 32.7 bits (73), Expect(2) = 9e-06
 Identities = 21/36 (58%), Positives = 21/36 (58%)
 Frame = -3

Query: 109  DVSGSESADGGECSCXXXXXXXXXXXXXDKAESEGE 2
            DVSGSESADG ECS              DKAESEGE
Sbjct: 1150 DVSGSESADGEECS----QEEHDDGEHDDKAESEGE 1181


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