BLASTX nr result

ID: Aconitum21_contig00023669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023669
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    62   5e-08
ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    60   2e-07
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    60   2e-07

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/104 (39%), Positives = 53/104 (50%)
 Frame = +3

Query: 126  YLVEWRGELLMVVRXXXXXXXXXXXXXXXGTNAFKIYKFDFANMKFDELKSLGDHSLFLG 305
            YLVE  GE+ MV R                T  F + K D  N +++E+++L   S FLG
Sbjct: 1161 YLVESGGEIYMVTRNLYDTARRDIPYMRTWT--FSVLKLDMCNKRWEEVENLDHCSFFLG 1218

Query: 306  FNMSVSVLASDYFGLVRSNCIYFTDDYPVQFIGDKRGHDMGVFD 437
             N S S  ASDY    R N IYFTDDY   F+   R  DMG+++
Sbjct: 1219 NNHSFSTWASDY-PEFRKNSIYFTDDY-CGFLNIPRNFDMGIYN 1260


>ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 44/112 (39%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
 Frame = +3

Query: 111 GEPKHYLVEWRGELLMVVRXXXXXXXXXXXXXXXGTNAFKIYKFDFANMKFDELKSLGDH 290
           G  + YL    G LL+V R                T +F  YK +    K  +++SLGD 
Sbjct: 188 GYKQWYLANLNGSLLLVGRIREYHVPVYGYE----TFSFVAYKLEREESKLSDVESLGDK 243

Query: 291 SLFLGFNMSVSVLASDYFGLVRSNCIYFTDD---YPVQFIGDKRGHDMGVFD 437
            LFLG+N S SV A D F   + +CIYFTDD       FI +  GHD GVFD
Sbjct: 244 MLFLGWNCSHSVSALD-FNKCKGDCIYFTDDNLMVCADFIWE--GHDFGVFD 292


>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
           gi|223551313|gb|EEF52799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 402

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
 Frame = +3

Query: 216 TNAFKIYKFDFANMKFDELKSLGDHSLFLGFNMSVSVLASDYFGLVRSNCIYFTDDYPVQ 395
           T  F+IYK D    K  E  SLGD  LFLG N S+S+ A DY    + NCIYFTDDY ++
Sbjct: 281 TERFEIYKLDDGGWKKKE--SLGDKMLFLGGNGSLSISALDY-SKCKGNCIYFTDDY-IR 336

Query: 396 FIGDK--RGHDMGVFD 437
              D    GHD G++D
Sbjct: 337 LCKDYVWEGHDYGIYD 352


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
 Frame = +3

Query: 123 HYLVEWRGELLMVVRXXXXXXXXXXXXXXX---GTNAFKIYKFDFANMKFDELKSLGDHS 293
           HY V   G++L+++R                   T  F+++K ++  + +  +++LG+  
Sbjct: 253 HYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERV 312

Query: 294 LFLGFNMSVSVLASDYFGLVRSNCIYFTDDYPVQFIGDKRG-HDMGVF 434
           LF+G N S+S  ASD+ G   ++CIYFTDDY      D  G HD+GVF
Sbjct: 313 LFVGGNSSLSFCASDFVG-CSADCIYFTDDYSESNDDDACGKHDLGVF 359


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = +3

Query: 111 GEPKHYLVEWRGELLMVVRXXXXXXXXXXXXXXXG----TNAFKIYKFDFANMKFDELKS 278
           G    YLV    ELL+V R                    T  F++++ D+   ++  + +
Sbjct: 253 GGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMST 312

Query: 279 LGDHSLFLGFNMSVSVLASDYFGLVRSNCIYFTDDY-PVQFIGDKRGHDMGVF 434
           LGD +LF+G N S+S+ A+D+ G +  NCIY+TDDY    + G    HD+G+F
Sbjct: 313 LGDKALFIGENSSLSLSATDFSGCM-GNCIYYTDDYLDANYDGHFGDHDLGIF 364


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