BLASTX nr result
ID: Aconitum21_contig00023655
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Aconitum21_contig00023655 (464 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica... 117 1e-24 emb|CBI30650.3| unnamed protein product [Vitis vinifera] 117 1e-24 ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu... 110 2e-22 ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|2... 109 2e-22 tpg|DAA52873.1| TPA: putative RNA helicase family protein [Zea m... 99 3e-19 >ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis vinifera] Length = 695 Score = 117 bits (293), Expect = 1e-24 Identities = 66/113 (58%), Positives = 69/113 (61%) Frame = -2 Query: 340 MSQFWKPGSEKPCLLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXXXXXXXXFFXXXX 161 MSQFWKPGSEKP LLDDEEGG+LF+S+ S Sbjct: 1 MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYS---------------------- 38 Query: 160 XXXXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKTTQIPQ 2 IEKQRQRLPVYKYRTAILY VETHATTIIVGETGSGKTTQIPQ Sbjct: 39 ---------NIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQ 82 >emb|CBI30650.3| unnamed protein product [Vitis vinifera] Length = 694 Score = 117 bits (293), Expect = 1e-24 Identities = 66/113 (58%), Positives = 69/113 (61%) Frame = -2 Query: 340 MSQFWKPGSEKPCLLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXXXXXXXXFFXXXX 161 MSQFWKPGSEKP LLDDEEGG+LF+S+ S Sbjct: 1 MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYS---------------------- 38 Query: 160 XXXXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKTTQIPQ 2 IEKQRQRLPVYKYRTAILY VETHATTIIVGETGSGKTTQIPQ Sbjct: 39 ---------NIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQ 82 >ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 696 Score = 110 bits (274), Expect = 2e-22 Identities = 61/113 (53%), Positives = 68/113 (60%) Frame = -2 Query: 340 MSQFWKPGSEKPCLLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXXXXXXXXFFXXXX 161 M+ FWKPG+EKP LLDDEEGG++F SS +S Sbjct: 1 MALFWKPGTEKPPLLDDEEGGVVFLSSSVSSSSSGYGYV--------------------- 39 Query: 160 XXXXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKTTQIPQ 2 IEKQRQRLPVYKYRTAILY VETHAT++IVGETGSGKTTQIPQ Sbjct: 40 ---------SIEKQRQRLPVYKYRTAILYLVETHATSVIVGETGSGKTTQIPQ 83 >ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|222848726|gb|EEE86273.1| predicted protein [Populus trichocarpa] Length = 702 Score = 109 bits (273), Expect = 2e-22 Identities = 61/111 (54%), Positives = 65/111 (58%) Frame = -2 Query: 334 QFWKPGSEKPCLLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXXXXXXXXFFXXXXXX 155 QFWKPGSEKP +L+DEEGG++FF PLS Sbjct: 4 QFWKPGSEKPRILEDEEGGVVFFGPPLSSAASSSSRFGYA-------------------- 43 Query: 154 XXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKTTQIPQ 2 I QRQRLPVYKYRTAILY VETHATTIIVGETGSGKTTQIPQ Sbjct: 44 -------SIGSQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQ 87 >tpg|DAA52873.1| TPA: putative RNA helicase family protein [Zea mays] Length = 940 Score = 99.4 bits (246), Expect = 3e-19 Identities = 60/125 (48%), Positives = 68/125 (54%), Gaps = 2/125 (1%) Frame = -2 Query: 370 SYRIAVYKYKMSQFWKPGSEKPC--LLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXX 197 S I V MS+FWKPGSEKP L+DDEEGG++F S S Sbjct: 232 SLAIRVGGQAMSRFWKPGSEKPSTLLVDDEEGGVVFLPSSSSVSSSGFGYA--------- 282 Query: 196 XXXXXXFFXXXXXXXXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKT 17 +E+QRQRLPVYKYR AILY VE HATTI+VGETGSGK+ Sbjct: 283 ---------------------SLERQRQRLPVYKYRKAILYLVERHATTIVVGETGSGKS 321 Query: 16 TQIPQ 2 TQIPQ Sbjct: 322 TQIPQ 326