BLASTX nr result

ID: Aconitum21_contig00023655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023655
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helica...   117   1e-24
emb|CBI30650.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinu...   110   2e-22
ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
tpg|DAA52873.1| TPA: putative RNA helicase family protein [Zea m...    99   3e-19

>ref|XP_002276679.2| PREDICTED: probable ATP-dependent RNA helicase DHX35 [Vitis
           vinifera]
          Length = 695

 Score =  117 bits (293), Expect = 1e-24
 Identities = 66/113 (58%), Positives = 69/113 (61%)
 Frame = -2

Query: 340 MSQFWKPGSEKPCLLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXXXXXXXXFFXXXX 161
           MSQFWKPGSEKP LLDDEEGG+LF+S+  S                              
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYS---------------------- 38

Query: 160 XXXXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKTTQIPQ 2
                     IEKQRQRLPVYKYRTAILY VETHATTIIVGETGSGKTTQIPQ
Sbjct: 39  ---------NIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQ 82


>emb|CBI30650.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score =  117 bits (293), Expect = 1e-24
 Identities = 66/113 (58%), Positives = 69/113 (61%)
 Frame = -2

Query: 340 MSQFWKPGSEKPCLLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXXXXXXXXFFXXXX 161
           MSQFWKPGSEKP LLDDEEGG+LF+S+  S                              
Sbjct: 1   MSQFWKPGSEKPRLLDDEEGGVLFYSASASSSSGFGYS---------------------- 38

Query: 160 XXXXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKTTQIPQ 2
                     IEKQRQRLPVYKYRTAILY VETHATTIIVGETGSGKTTQIPQ
Sbjct: 39  ---------NIEKQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQ 82


>ref|XP_002522527.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223538218|gb|EEF39827.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 696

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/113 (53%), Positives = 68/113 (60%)
 Frame = -2

Query: 340 MSQFWKPGSEKPCLLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXXXXXXXXFFXXXX 161
           M+ FWKPG+EKP LLDDEEGG++F SS +S                              
Sbjct: 1   MALFWKPGTEKPPLLDDEEGGVVFLSSSVSSSSSGYGYV--------------------- 39

Query: 160 XXXXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKTTQIPQ 2
                     IEKQRQRLPVYKYRTAILY VETHAT++IVGETGSGKTTQIPQ
Sbjct: 40  ---------SIEKQRQRLPVYKYRTAILYLVETHATSVIVGETGSGKTTQIPQ 83


>ref|XP_002305762.1| predicted protein [Populus trichocarpa] gi|222848726|gb|EEE86273.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score =  109 bits (273), Expect = 2e-22
 Identities = 61/111 (54%), Positives = 65/111 (58%)
 Frame = -2

Query: 334 QFWKPGSEKPCLLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXXXXXXXXFFXXXXXX 155
           QFWKPGSEKP +L+DEEGG++FF  PLS                                
Sbjct: 4   QFWKPGSEKPRILEDEEGGVVFFGPPLSSAASSSSRFGYA-------------------- 43

Query: 154 XXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKTTQIPQ 2
                   I  QRQRLPVYKYRTAILY VETHATTIIVGETGSGKTTQIPQ
Sbjct: 44  -------SIGSQRQRLPVYKYRTAILYLVETHATTIIVGETGSGKTTQIPQ 87


>tpg|DAA52873.1| TPA: putative RNA helicase family protein [Zea mays]
          Length = 940

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 60/125 (48%), Positives = 68/125 (54%), Gaps = 2/125 (1%)
 Frame = -2

Query: 370 SYRIAVYKYKMSQFWKPGSEKPC--LLDDEEGGILFFSSPLSXXXXXXXXXXXXXXXXXX 197
           S  I V    MS+FWKPGSEKP   L+DDEEGG++F  S  S                  
Sbjct: 232 SLAIRVGGQAMSRFWKPGSEKPSTLLVDDEEGGVVFLPSSSSVSSSGFGYA--------- 282

Query: 196 XXXXXXFFXXXXXXXXXXXXSGIEKQRQRLPVYKYRTAILYSVETHATTIIVGETGSGKT 17
                                 +E+QRQRLPVYKYR AILY VE HATTI+VGETGSGK+
Sbjct: 283 ---------------------SLERQRQRLPVYKYRKAILYLVERHATTIVVGETGSGKS 321

Query: 16  TQIPQ 2
           TQIPQ
Sbjct: 322 TQIPQ 326


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