BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023619
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    62   6e-09
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta...    56   3e-07
gb|AAD17395.1| putative non-LTR retroelement reverse transcripta...    59   4e-07
ref|XP_002515856.1| conserved hypothetical protein [Ricinus comm...    51   6e-07
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    52   1e-06

>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 61.6 bits (148), Expect(2) = 6e-09
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
 Frame = -1

Query: 423 FFECKHAKITWFSSFLQFDSDSI-NSTNPLDIWEFLYEKYKDDDNQTFIMSFIAYTLWFI 247
           FF+C  A+  W    L  + + + N   P+D+ EF+    +       +M  +A  LW+ 
Sbjct: 197 FFKCGMARQVWELLGLSTEREVLANFYTPIDVVEFILRASESRK----LMMIVA--LWYT 250

Query: 246 WNARNKFTFEALAINPMST---LEIDLRNTLEYKNLWDPDVVSEPRTIFWSPPPDNSLKL 76
           W+ RN    E    +P +    +E+ ++     +   +P    E +   WS PP + LKL
Sbjct: 251 WSERNAIREEDRRRSPQTLARCVELYVQEMRTTETTANPTANQEQQQYKWSKPPVDILKL 310

Query: 75  NTDASWDPNTNKSHFGWVIRDHNG 4
           N D S+ P T    +G +IRDH G
Sbjct: 311 NCDGSFSPETRAGSWGVLIRDHEG 334



 Score = 23.5 bits (49), Expect(2) = 6e-09
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 466 CPVCNDKKETVHHCFF 419
           CPVCN   E   H FF
Sbjct: 183 CPVCNQVGEDGGHLFF 198


>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1225

 Score = 56.2 bits (134), Expect(2) = 3e-07
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 3/111 (2%)
 Frame = -1

Query: 330  WEFLYEKYKDDDNQTFIMSFIAYTLWFIWNARNKFTFEALAINPMSTLEIDLRNTLEYKN 151
            ++FL  + K+ D    IM    + LW+IW +RN+F FE +  +P   L+  ++    +K 
Sbjct: 1009 FDFLLSRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQ 1068

Query: 150  LWDPDVVSE---PRTIFWSPPPDNSLKLNTDASWDPNTNKSHFGWVIRDHN 7
                +V +E   P+ +  + PP  ++    DASW      S  GWV+ D +
Sbjct: 1069 ANSKEVATEYPPPQVVPANLPPTRNV-CQFDASWHLKDTLSGHGWVLVDQD 1118



 Score = 23.1 bits (48), Expect(2) = 3e-07
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -3

Query: 478  SDDLCPVCNDKKETVHHCFF 419
            ++ +CP C  ++E+++H  F
Sbjct: 960  TEKVCPRCGAEEESINHLLF 979


>gb|AAD17395.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1138

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 8/148 (5%)
 Frame = -1

Query: 420  FECKHAKITWFSSFLQFDSDSINSTNPLDIWEFLYEKYKDDDNQTFIMSFIAYTLWFIWN 241
            F C  A+  W  S +        + +     +FL+E  K       +     + LW +W 
Sbjct: 875  FTCSMARQVWALSGVPTPEFGFQNASIFANIQFLFELKKMILVPDLVKRSWPWVLWRLWK 934

Query: 240  ARNKFTFEALAINPMSTLEIDLRNTLEYKNLWDPDVVSE--------PRTIFWSPPPDNS 85
             RNK  F+ +   P++++     +TLE+        VSE        P T  W PPP+  
Sbjct: 935  NRNKLFFDGITFCPLNSIVKIQEDTLEWFQAQSQIRVSESEEGQRVIPFTHSWEPPPEGW 994

Query: 84   LKLNTDASWDPNTNKSHFGWVIRDHNGS 1
            +K N  ++W          WV+RD +GS
Sbjct: 995  VKCNIGSAWSGKKKVCGGAWVLRDEHGS 1022


>ref|XP_002515856.1| conserved hypothetical protein [Ricinus communis]
           gi|223545011|gb|EEF46525.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 231

 Score = 51.2 bits (121), Expect(2) = 6e-07
 Identities = 38/148 (25%), Positives = 61/148 (41%), Gaps = 8/148 (5%)
 Frame = -1

Query: 420 FECKHAKITWFSSFLQFDSDSINSTNPLDIWEFLYEKYKDDDNQTFIMSFIAYTLWFIWN 241
           F C  A   WFSS L +  D I   +    WE + + +   + +             IWN
Sbjct: 42  FFCPRASQVWFSSTLNYRPDPIGFPSVSRWWEDIDKAFGAKEKRG------------IWN 89

Query: 240 ARNKFTFEALAINPMSTL--------EIDLRNTLEYKNLWDPDVVSEPRTIFWSPPPDNS 85
            RN+  F+   ++P +          E +   +L  + L     V EP+   W PPP + 
Sbjct: 90  MRNRVVFQQWFLSPSAVALKVEKCYHEFNQCPSLFSQRLSPEKEVVEPQ--LWRPPPSSK 147

Query: 84  LKLNTDASWDPNTNKSHFGWVIRDHNGS 1
           LK N DA++   T+ +     + D NG+
Sbjct: 148 LKFNVDAAFCSRTSTTGIAAAVWDGNGN 175



 Score = 26.9 bits (58), Expect(2) = 6e-07
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 481 ISDDLCPVCNDKKETVHHCFF 419
           ++  +C VCND+ E+V H  F
Sbjct: 22  VNSPVCCVCNDEAESVEHMLF 42


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 52.4 bits (124), Expect(2) = 1e-06
 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 7/149 (4%)
 Frame = -1

Query: 426  AFFECKHAKITWFSSFLQFDSDSINSTNPLDIWEFLYEKYKDDDNQTFIMSFIAYTLWFI 247
            A F C  A + W+ S      + + S +  +    +    +D     F      + +W I
Sbjct: 1253 ALFTCPFATMAWWLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRI 1312

Query: 246  WNARNKFTFEALAINPMSTLEID-------LRNTLEYKNLWDPDVVSEPRTIFWSPPPDN 88
            W ARN   F     +P  T+          L  T  +K    P        I W  PP  
Sbjct: 1313 WKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPAT 1372

Query: 87   SLKLNTDASWDPNTNKSHFGWVIRDHNGS 1
             +K N DA +D    ++  GW+IR+H G+
Sbjct: 1373 YVKCNFDAGFDVQKLEATGGWIIRNHYGT 1401



 Score = 25.0 bits (53), Expect(2) = 1e-06
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 475  DDLCPVCNDKKETVHHCFF 419
            D +CP C+ + E+++H  F
Sbjct: 1237 DPICPRCHRENESINHALF 1255