BLASTX nr result

ID: Aconitum21_contig00023600 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023600
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527228.1| mads box protein, putative [Ricinus communis...    56   3e-06
ref|XP_002302361.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002527228.1| mads box protein, putative [Ricinus communis]
           gi|223533404|gb|EEF35154.1| mads box protein, putative
           [Ricinus communis]
          Length = 173

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/46 (58%), Positives = 34/46 (73%)
 Frame = +1

Query: 10  MKSVIERYNKTKEEHHQLLNPTSEVKVSLRTNIIIQPSSNTICESN 147
           MKS+IERYNKTKEEH QLLNPTSEVK   R   +++   + + ES+
Sbjct: 1   MKSIIERYNKTKEEHQQLLNPTSEVKFWQREAAVLRQQLHNLQESH 46


>ref|XP_002302361.1| predicted protein [Populus trichocarpa] gi|222844087|gb|EEE81634.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = +1

Query: 7   SMKSVIERYNKTKEEHHQLLNPTSEVKVSLRTNIIIQPSSNTICESN 147
           SMKSVIERYNK+K+EHHQ+ NPTSEVK   R   +++    T+ E++
Sbjct: 61  SMKSVIERYNKSKDEHHQMGNPTSEVKFWQREAAVLRQQLQTLQENH 107


Top