BLASTX nr result

ID: Aconitum21_contig00023581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00023581
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat...   233   2e-59
ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containi...   228   4e-58
ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containi...   228   4e-58
ref|XP_002530608.1| pentatricopeptide repeat-containing protein,...   223   2e-56
ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat...   217   9e-55

>ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Vitis vinifera]
          Length = 622

 Score =  233 bits (594), Expect = 2e-59
 Identities = 121/186 (65%), Positives = 140/186 (75%), Gaps = 6/186 (3%)
 Frame = -3

Query: 540 NSQPSTPQSKISGF-DK-----DRNQGSVFICLEEKPNLHCDPPNMDECSTDVEKVYRIL 379
           N+    P  ++S F DK     +R  G   + LE          N DE S DVEKVYRIL
Sbjct: 6   NTDQVHPNHRLSNFGDKNCTISERRGGFGLVRLESNRENCTYDQNYDEFSADVEKVYRIL 65

Query: 378 RKFHTRVPKLDLALHESGVTVSSGLVERVLNRCGDAGNLGYRFFAWASKQPGYRPNYQVY 199
           RKFH+RVPKL+LAL ESGV V SGL ERVLNRCGDAGNLGYRFF WASKQPGYR +Y+VY
Sbjct: 66  RKFHSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVY 125

Query: 198 KSIIKILGKMRQFGDVWALIEEMRKENPELLTSDAFVVLMRKFDSARLVNKAIQVLDEMP 19
           K++IKILGKMRQFG VWALIEEMR+ENP+ ++   FVVLMR+F SAR+V KAI+VLDEMP
Sbjct: 126 KAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMP 185

Query: 18  KSGCDP 1
           K GC+P
Sbjct: 186 KYGCEP 191


>ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 664

 Score =  228 bits (582), Expect = 4e-58
 Identities = 111/156 (71%), Positives = 129/156 (82%)
 Frame = -3

Query: 468 ICLEEKPNLHCDPPNMDECSTDVEKVYRILRKFHTRVPKLDLALHESGVTVSSGLVERVL 289
           I L+  P+      + DE S DVEKVYRILRKFHTRVPKL+LAL ESGV + SGL ERVL
Sbjct: 78  IHLKTTPHESAHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVL 137

Query: 288 NRCGDAGNLGYRFFAWASKQPGYRPNYQVYKSIIKILGKMRQFGDVWALIEEMRKENPEL 109
           +RCGDAGNLGYRFF WASKQPGYR +Y+VYK++IK LGKMRQFG VWALIEEMRKENP +
Sbjct: 138 SRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYM 197

Query: 108 LTSDAFVVLMRKFDSARLVNKAIQVLDEMPKSGCDP 1
           LT + F+VLMR+F S R+V KA++VLDEMPK GC+P
Sbjct: 198 LTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEP 233


>ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49730-like [Cucumis sativus]
          Length = 641

 Score =  228 bits (582), Expect = 4e-58
 Identities = 111/156 (71%), Positives = 129/156 (82%)
 Frame = -3

Query: 468 ICLEEKPNLHCDPPNMDECSTDVEKVYRILRKFHTRVPKLDLALHESGVTVSSGLVERVL 289
           I L+  P+      + DE S DVEKVYRILRKFHTRVPKL+LAL ESGV + SGL ERVL
Sbjct: 55  IHLKTTPHESAHDRDADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVL 114

Query: 288 NRCGDAGNLGYRFFAWASKQPGYRPNYQVYKSIIKILGKMRQFGDVWALIEEMRKENPEL 109
           +RCGDAGNLGYRFF WASKQPGYR +Y+VYK++IK LGKMRQFG VWALIEEMRKENP +
Sbjct: 115 SRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYM 174

Query: 108 LTSDAFVVLMRKFDSARLVNKAIQVLDEMPKSGCDP 1
           LT + F+VLMR+F S R+V KA++VLDEMPK GC+P
Sbjct: 175 LTPEVFIVLMRRFASVRMVKKAVEVLDEMPKYGCEP 210


>ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529856|gb|EEF31788.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 596

 Score =  223 bits (567), Expect = 2e-56
 Identities = 108/160 (67%), Positives = 131/160 (81%), Gaps = 4/160 (2%)
 Frame = -3

Query: 468 ICLEEKPNLHCDPPN----MDECSTDVEKVYRILRKFHTRVPKLDLALHESGVTVSSGLV 301
           +CL+ + N   D  N    +DE + DVEKVYRILR FH+RVPKL+LAL ESGVT+ +GL 
Sbjct: 50  VCLKTQENNTSDRDNSSSKVDEFAKDVEKVYRILRNFHSRVPKLELALQESGVTMRAGLT 109

Query: 300 ERVLNRCGDAGNLGYRFFAWASKQPGYRPNYQVYKSIIKILGKMRQFGDVWALIEEMRKE 121
           ERVLNRCGDAGNLGYRFF WASKQPGYR +Y+ YK+++KI  KMRQFG VWAL+EEMRK+
Sbjct: 110 ERVLNRCGDAGNLGYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKD 169

Query: 120 NPELLTSDAFVVLMRKFDSARLVNKAIQVLDEMPKSGCDP 1
           N  L+TS+ F+VL+R+F SARLV KAI+VLDEMPK GC+P
Sbjct: 170 NSVLITSELFIVLIRRFASARLVEKAIEVLDEMPKYGCEP 209


>ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g65820-like [Glycine max]
          Length = 628

 Score =  217 bits (553), Expect = 9e-55
 Identities = 104/157 (66%), Positives = 127/157 (80%)
 Frame = -3

Query: 471 FICLEEKPNLHCDPPNMDECSTDVEKVYRILRKFHTRVPKLDLALHESGVTVSSGLVERV 292
           FI L+E    H D    DE ++DVEKVYRILRK+H+RVPKL+LAL ESGV V  GL ERV
Sbjct: 43  FIRLQEISINHTDDQTHDEFASDVEKVYRILRKYHSRVPKLELALRESGVVVRPGLTERV 102

Query: 291 LNRCGDAGNLGYRFFAWASKQPGYRPNYQVYKSIIKILGKMRQFGDVWALIEEMRKENPE 112
           LNRCGDAGNL YRF++WASKQ G+R ++  YK++IK+L +MRQFG VWALIEEMR+ENP 
Sbjct: 103 LNRCGDAGNLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPH 162

Query: 111 LLTSDAFVVLMRKFDSARLVNKAIQVLDEMPKSGCDP 1
           L+T   FV+LMR+F SAR+V+KA+QVLDEMP  GC+P
Sbjct: 163 LITPQVFVILMRRFASARMVHKAVQVLDEMPNYGCEP 199


Top