BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021970
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_23193834.1| Ribonuclease H [Clostridium ultunense Esp] gi...    66   3e-09
ref|YP_004449539.1| ribonuclease H-like protein [Haliscomenobact...    62   5e-08
ref|ZP_01053250.1| ribonuclease H-related protein [Polaribacter ...    62   6e-08
ref|YP_003245670.1| ribonuclease H-like protein [Paenibacillus s...    60   2e-07
ref|YP_003862207.1| ribonuclease H-like protein [Maribacter sp. ...    60   2e-07

>ref|ZP_23193834.1| Ribonuclease H [Clostridium ultunense Esp]
           gi|452990499|emb|CCQ98285.1| Ribonuclease H [Clostridium
           ultunense Esp]
          Length = 218

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/52 (55%), Positives = 34/52 (65%)
 Frame = -2

Query: 183 KPKYYVVWVGREPGIYTSWEMCHRQTNKFPGIAYMAYNTLDEACCAYNMYFE 28
           KPKYYVVW GR PGIYT WE C  Q + FPG  Y +++T +EA  AY    E
Sbjct: 3   KPKYYVVWKGRRPGIYTRWEECKEQIHHFPGARYKSFSTKEEAERAYKEAIE 54


>ref|YP_004449539.1| ribonuclease H-like protein [Haliscomenobacter hydrossis DSM 1100]
           gi|332335565|gb|AEE52666.1| ribonuclease H-related
           protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 218

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 30/68 (44%), Positives = 36/68 (52%)
 Frame = -2

Query: 204 PTITMSTKPKYYVVWVGREPGIYTSWEMCHRQTNKFPGIAYMAYNTLDEACCAYNMYFER 25
           P  TMS   KYYVVW G +PGIY SW  C  Q N FPG  Y +Y +  EA  A+      
Sbjct: 2   PIPTMSKAKKYYVVWTGAKPGIYESWAECQAQINGFPGARYKSYESKAEADKAFKQTAPS 61

Query: 24  VDPRASSS 1
             P A+ +
Sbjct: 62  FKPGAAKT 69


>ref|ZP_01053250.1| ribonuclease H-related protein [Polaribacter sp. MED152]
           gi|85821531|gb|EAQ42678.1| ribonuclease H-related
           protein [Polaribacter sp. MED152]
          Length = 211

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 27/62 (43%), Positives = 41/62 (66%)
 Frame = -2

Query: 186 TKPKYYVVWVGREPGIYTSWEMCHRQTNKFPGIAYMAYNTLDEACCAYNMYFERVDPRAS 7
           +K K+YVVW GR+PGI++SW +C RQ + F G  Y ++ +LDEA  A+   FE    + S
Sbjct: 2   SKKKFYVVWKGRKPGIFSSWNVCKRQIDGFEGAQYKSFLSLDEAELAFTKKFEDYKGKKS 61

Query: 6   SS 1
           ++
Sbjct: 62  TA 63


>ref|YP_003245670.1| ribonuclease H-like protein [Paenibacillus sp. Y412MC10]
           gi|261285892|gb|ACX67863.1| ribonuclease H-related
           protein [Paenibacillus sp. Y412MC10]
          Length = 221

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
 Frame = -2

Query: 183 KPKYYVVWVGREPGIYTSWEMCHRQTNKFPGIAYMAYNTLDEA----CCAYNMYFERVDP 16
           K KYYVVWVG+ PGIYTSW  C +Q N+F G  + A+ +  EA       Y  Y+ +   
Sbjct: 3   KQKYYVVWVGKVPGIYTSWGECQQQVNQFTGAKFKAFESRSEAEQAYAAGYKNYWAQSGS 62

Query: 15  RASSS 1
            +SSS
Sbjct: 63  GSSSS 67


>ref|YP_003862207.1| ribonuclease H-like protein [Maribacter sp. HTCC2170]
           gi|88710695|gb|EAR02927.1| ribonuclease H-related
           protein [Maribacter sp. HTCC2170]
          Length = 211

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/63 (39%), Positives = 38/63 (60%)
 Frame = -2

Query: 192 MSTKPKYYVVWVGREPGIYTSWEMCHRQTNKFPGIAYMAYNTLDEACCAYNMYFERVDPR 13
           M+ K K+YVVW G+ PG+Y++WE C      + G  Y +++T DEA  AYN  +E    +
Sbjct: 1   MAKKSKFYVVWKGKRPGVYSTWEDCKAAITGYKGAQYKSFSTFDEAKKAYNSNYEEYKGK 60

Query: 12  ASS 4
            +S
Sbjct: 61  KNS 63