BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021623
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612353.1| Pentatricopeptide repeat-containing protein ...   135   3e-30
ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar...   107   1e-21
gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]        104   6e-21
ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   103   1e-20
ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat...   103   1e-20

>ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513688|gb|AES95311.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  135 bits (340), Expect = 3e-30
 Identities = 63/128 (49%), Positives = 88/128 (68%)
 Frame = +3

Query: 3   KSGFCHEIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALR 182
           KS  C   +VGNA++++YS C  ++DA KAF  +V +DD+SWSSIIG  ++N +E +AL 
Sbjct: 481 KSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALE 540

Query: 183 LCKEMLATGIXXXXXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYA 362
           LCKEML  GI          I+ACS L ++  GKQ H F +K G+  ++Y+GSS+IDMYA
Sbjct: 541 LCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYA 600

Query: 363 KCGSMENS 386
           KCG++E S
Sbjct: 601 KCGNIEES 608



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/119 (27%), Positives = 60/119 (50%)
 Frame = +3

Query: 21  EIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEML 200
           +++V +A+++LY+ C  V    K F  M  +D+  WSS+I  Y  N    EA+   K+M 
Sbjct: 283 DVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMC 342

Query: 201 ATGIXXXXXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCGSM 377
              +          + AC  +  ++ G Q H  ++K G + + +V S L+++YA  G +
Sbjct: 343 RQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGEL 401



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/114 (28%), Positives = 54/114 (47%)
 Frame = +3

Query: 30  VGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATG 209
           + N +++ YS   +   AHK F  M  R+  +W+++I  + K G   +A  +   M  + 
Sbjct: 85  LANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSD 144

Query: 210 IXXXXXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCG 371
                      + AC+N     +G Q H  +V+ G + E + GSSL+ MY K G
Sbjct: 145 ERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGG 198



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/133 (24%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
 Frame = +3

Query: 3   KSGFCHEIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALR 182
           KSG+  ++ +G+++I++Y+ CG++E++ K F   +  ++ ++++II  Y  +G   +A+ 
Sbjct: 582 KSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIE 641

Query: 183 LCKEMLATGIXXXXXXXXXXITACSNLTSMHLGKQFHSFVV-----KLGFKTEIYVGSSL 347
           +  ++   G+          ++ACS+  + ++ +  H F +     K+  K+E Y  S L
Sbjct: 642 VLSKLEKNGVAPNHVTFLALMSACSH--AGYVEETSHLFTLMLDKYKIKPKSEHY--SCL 697

Query: 348 IDMYAKCGSMENS 386
           +D Y + G +E +
Sbjct: 698 VDAYGRAGRLEEA 710


>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643232|gb|AEE76753.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  107 bits (266), Expect = 1e-21
 Identities = 43/126 (34%), Positives = 83/126 (65%)
 Frame = +3

Query: 3   KSGFCHEIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALR 182
           + G   ++ +G++++++Y+    +ED+ + F+ + CRD  SW+S++  Y +NG   EALR
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329

Query: 183 LCKEMLATGIXXXXXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYA 362
           L ++M+   +          I AC++L ++HLGKQ H +V++ GF + I++ S+L+DMY+
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389

Query: 363 KCGSME 380
           KCG+++
Sbjct: 390 KCGNIK 395



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/105 (31%), Positives = 60/105 (57%)
 Frame = +3

Query: 72  VEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATGIXXXXXXXXXXITA 251
           ++   + F VM  +D  S+++II  Y ++G+  +ALR+ +EM  T +          +  
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251

Query: 252 CSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCGSMENS 386
            S    +  GK+ H +V++ G  +++Y+GSSL+DMYAK   +E+S
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS 296



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   KSGFCHEIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALR 182
           + GF   I + +A++++YS CG+++ A K F  M   D+ SW++II  +  +G   EA+ 
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430

Query: 183 LCKEMLATGIXXXXXXXXXXITACSNLTSM-HLGKQFHSFVVKLGFKTEIYVGSSLIDMY 359
           L +EM   G+          +TACS++  +      F+S     G   E+   +++ D+ 
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490

Query: 360 AKCGSMENS 386
            + G +E +
Sbjct: 491 GRAGKLEEA 499



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/108 (26%), Positives = 55/108 (50%)
 Frame = +3

Query: 42  VINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATGIXXX 221
           VI++Y+    + +A   F  +      +W S+I C+    +  +AL    EM A+G    
Sbjct: 45  VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPD 104

Query: 222 XXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAK 365
                  + +C+ +  +  G+  H F+V+LG   ++Y G++L++MYAK
Sbjct: 105 HNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAK 152


>gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  104 bits (260), Expect = 6e-21
 Identities = 47/128 (36%), Positives = 80/128 (62%)
 Frame = +3

Query: 3   KSGFCHEIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALR 182
           + G   E+ V +++I++Y+ C  V D+++ FT++  RD  SW+SII    +NG+  E L+
Sbjct: 328 RQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLK 387

Query: 183 LCKEMLATGIXXXXXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYA 362
             ++ML   I          + AC++LT++HLGKQ H ++ + GF   I++ SSL+DMYA
Sbjct: 388 FFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 447

Query: 363 KCGSMENS 386
           KCG++  +
Sbjct: 448 KCGNIRTA 455



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/115 (25%), Positives = 64/115 (55%)
 Frame = +3

Query: 42  VINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATGIXXX 221
           ++++YS    + D+ + F  +      +W S+I CY  +G+  ++L     MLA+G+   
Sbjct: 48  LLSIYSHINLLHDSLRLFNTLHFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPD 107

Query: 222 XXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCGSMENS 386
                  + AC+ L  ++LG+  H +++++G   ++Y G++L++MY+K   ++ S
Sbjct: 108 HNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLKKS 162



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/106 (32%), Positives = 53/106 (50%)
 Frame = +3

Query: 69  SVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATGIXXXXXXXXXXIT 248
           SV+   K F +M  +D  SW++II    +NG+  E L + +EM    +          + 
Sbjct: 249 SVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLP 308

Query: 249 ACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCGSMENS 386
             +    +  GK+ H   ++ G   E+YV SSLIDMYAKC  + +S
Sbjct: 309 LIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDS 354



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   KSGFCHEIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALR 182
           ++GF   I + ++++++Y+ CG++  A + F  M  RD  SW+++I     +G   +A+ 
Sbjct: 429 RNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIE 488

Query: 183 LCKEMLATGIXXXXXXXXXXITACSNLTSM-HLGKQFHSFVVKLGFKTEIYVGSSLIDMY 359
           L ++M   GI          +TACS+   +    K F+S  +  G    +   +++ D+ 
Sbjct: 489 LFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLL 548

Query: 360 AKCGSMENS 386
            + G +E +
Sbjct: 549 GRAGRLEEA 557


>ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/128 (37%), Positives = 79/128 (61%)
 Frame = +3

Query: 3   KSGFCHEIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALR 182
           + G   +I V +++I++Y+ C  V D+ + FT++  RD  SW+SII    +NG+  E LR
Sbjct: 267 RQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLR 326

Query: 183 LCKEMLATGIXXXXXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYA 362
             ++ML   I          + AC++LT++HLGKQ H ++ + GF   I++ SSL+DMYA
Sbjct: 327 FFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 386

Query: 363 KCGSMENS 386
           KCG++  +
Sbjct: 387 KCGNIRTA 394



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/115 (25%), Positives = 64/115 (55%)
 Frame = +3

Query: 42  VINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATGIXXX 221
           ++++YS    + D+ + F  +      +W S+I CY  +G+  ++L     MLA+G+   
Sbjct: 46  LLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPD 105

Query: 222 XXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCGSMENS 386
                  + +C+ L  ++LG+  H +++++G   ++Y G++L++MY+K   +E S
Sbjct: 106 HNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEES 160



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/106 (32%), Positives = 53/106 (50%)
 Frame = +3

Query: 69  SVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATGIXXXXXXXXXXIT 248
           S +   K F +M  +D  SW++II    +NG+  E LR+ +EM    +          + 
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP 247

Query: 249 ACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCGSMENS 386
             +    +  GK+ H   ++ G   +IYV SSLIDMYAKC  + +S
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADS 293


>ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/128 (37%), Positives = 79/128 (61%)
 Frame = +3

Query: 3   KSGFCHEIIVGNAVINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALR 182
           + G   +I V +++I++Y+ C  V D+ + FT++  RD  SW+SII    +NG+  E LR
Sbjct: 267 RQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLR 326

Query: 183 LCKEMLATGIXXXXXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYA 362
             ++ML   I          + AC++LT++HLGKQ H ++ + GF   I++ SSL+DMYA
Sbjct: 327 FFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYA 386

Query: 363 KCGSMENS 386
           KCG++  +
Sbjct: 387 KCGNIRTA 394



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 29/115 (25%), Positives = 64/115 (55%)
 Frame = +3

Query: 42  VINLYSMCGSVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATGIXXX 221
           ++++YS    + D+ + F  +      +W S+I CY  +G+  ++L     MLA+G+   
Sbjct: 46  LLSIYSHINLLHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPD 105

Query: 222 XXXXXXXITACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCGSMENS 386
                  + +C+ L  ++LG+  H +++++G   ++Y G++L++MY+K   +E S
Sbjct: 106 HNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEES 160



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/106 (32%), Positives = 53/106 (50%)
 Frame = +3

Query: 69  SVEDAHKAFTVMVCRDDTSWSSIIGCYEKNGIEFEALRLCKEMLATGIXXXXXXXXXXIT 248
           S +   K F +M  +D  SW++II    +NG+  E LR+ +EM    +          + 
Sbjct: 188 SEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLP 247

Query: 249 ACSNLTSMHLGKQFHSFVVKLGFKTEIYVGSSLIDMYAKCGSMENS 386
             +    +  GK+ H   ++ G   +IYV SSLIDMYAKC  + +S
Sbjct: 248 LIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADS 293