BLASTX nr result

ID: Aconitum21_contig00021464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021464
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]              270   9e-71
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   270   9e-71
ref|XP_001769043.1| predicted protein [Physcomitrella patens sub...   266   2e-69
gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]                         265   5e-69
gb|ADB28927.1| topoisomerase II-like protein [Zea mays subsp. mays]   265   5e-69

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  270 bits (691), Expect = 9e-71
 Identities = 136/184 (73%), Positives = 152/184 (82%)
 Frame = +3

Query: 3   VNSIATIKGGSHVEYVTTQITSHXXXXXXXXXXXXXXXXXXXXSHVWIFVNALIDNPAFD 182
           VNSIATIKGG+HV+YVT QI +                     +H+W+FVNALIDNPAFD
Sbjct: 311 VNSIATIKGGTHVDYVTNQIANFVMSIVNKKNKNANIKAHTVKNHLWVFVNALIDNPAFD 370

Query: 183 SQTKETLTTRANSFGSKCELSQDLLKKVAKSGIVESLLSWADFKQSKDLKKTDGVKRGRI 362
           SQTKETLT R +SFGSKCELSQ+ LKKV+KSG+VESLLSWAD+KQ+KDLKKTDG KR R+
Sbjct: 371 SQTKETLTIRQSSFGSKCELSQEFLKKVSKSGVVESLLSWADYKQNKDLKKTDGTKRQRL 430

Query: 363 IGITKLEDANDAGGRNSERCTLILTEGDSAKALAMAGISVVGRDSYGVFPLRGKLLNVRE 542
            GITKLEDANDAGGRNSE+CTLILTEGDSAKALAMAGISVVGR+ YGVFPLRGKLLNVR+
Sbjct: 431 TGITKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRNHYGVFPLRGKLLNVRD 490

Query: 543 ASHK 554
           A  K
Sbjct: 491 AQKK 494


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  270 bits (691), Expect = 9e-71
 Identities = 136/184 (73%), Positives = 152/184 (82%)
 Frame = +3

Query: 3   VNSIATIKGGSHVEYVTTQITSHXXXXXXXXXXXXXXXXXXXXSHVWIFVNALIDNPAFD 182
           VNSIATIKGG+HV+YVT QI +                     +H+W+FVNALIDNPAFD
Sbjct: 311 VNSIATIKGGTHVDYVTNQIANFVMSIVNKKNKNANIKAHTVKNHLWVFVNALIDNPAFD 370

Query: 183 SQTKETLTTRANSFGSKCELSQDLLKKVAKSGIVESLLSWADFKQSKDLKKTDGVKRGRI 362
           SQTKETLT R +SFGSKCELSQ+ LKKV+KSG+VESLLSWAD+KQ+KDLKKTDG KR R+
Sbjct: 371 SQTKETLTIRQSSFGSKCELSQEFLKKVSKSGVVESLLSWADYKQNKDLKKTDGTKRQRL 430

Query: 363 IGITKLEDANDAGGRNSERCTLILTEGDSAKALAMAGISVVGRDSYGVFPLRGKLLNVRE 542
            GITKLEDANDAGGRNSE+CTLILTEGDSAKALAMAGISVVGR+ YGVFPLRGKLLNVR+
Sbjct: 431 TGITKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRNHYGVFPLRGKLLNVRD 490

Query: 543 ASHK 554
           A  K
Sbjct: 491 AQKK 494


>ref|XP_001769043.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162679677|gb|EDQ66121.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1172

 Score =  266 bits (680), Expect = 2e-69
 Identities = 132/183 (72%), Positives = 150/183 (81%)
 Frame = +3

Query: 6   NSIATIKGGSHVEYVTTQITSHXXXXXXXXXXXXXXXXXXXXSHVWIFVNALIDNPAFDS 185
           NSIATI+GG+HV YVT QI +H                    +H+W+FVNALIDNP FDS
Sbjct: 313 NSIATIRGGTHVAYVTDQIVTHVLALVNKKNKTAGVKPFQIKNHMWVFVNALIDNPTFDS 372

Query: 186 QTKETLTTRANSFGSKCELSQDLLKKVAKSGIVESLLSWADFKQSKDLKKTDGVKRGRII 365
           QTKETLTTRA+SFGSKCELS + LKKVAK G+VE++L+WADFKQSK+LKK DG KR RI 
Sbjct: 373 QTKETLTTRASSFGSKCELSPEFLKKVAKCGVVENVLTWADFKQSKELKKNDGAKRQRIT 432

Query: 366 GITKLEDANDAGGRNSERCTLILTEGDSAKALAMAGISVVGRDSYGVFPLRGKLLNVREA 545
           GI KL+DANDAGG++SE+CTLILTEGDSAKALAM+GISVVGRD YGVFPLRGKLLNVREA
Sbjct: 433 GIPKLDDANDAGGKSSEKCTLILTEGDSAKALAMSGISVVGRDKYGVFPLRGKLLNVREA 492

Query: 546 SHK 554
           SHK
Sbjct: 493 SHK 495


>gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]
          Length = 1412

 Score =  265 bits (676), Expect = 5e-69
 Identities = 131/184 (71%), Positives = 150/184 (81%)
 Frame = +3

Query: 3   VNSIATIKGGSHVEYVTTQITSHXXXXXXXXXXXXXXXXXXXXSHVWIFVNALIDNPAFD 182
           VN IATI+GGSHV+YVT QI +H                    SH+W+FVNALIDNPAFD
Sbjct: 307 VNRIATIRGGSHVDYVTNQIANHVVAIVNKKNKNANMKLHNVKSHLWVFVNALIDNPAFD 366

Query: 183 SQTKETLTTRANSFGSKCELSQDLLKKVAKSGIVESLLSWADFKQSKDLKKTDGVKRGRI 362
           SQTKETLTTR  SFGSKCELS D LKKV KSG++E++LSWADFK SK+LKKTDG K+ RI
Sbjct: 367 SQTKETLTTRQGSFGSKCELSSDFLKKVEKSGVIENVLSWADFKLSKELKKTDGSKKSRI 426

Query: 363 IGITKLEDANDAGGRNSERCTLILTEGDSAKALAMAGISVVGRDSYGVFPLRGKLLNVRE 542
            GI KLEDAN+AGG++S++CTLILTEGDSAKALAM+GI+VVGRD YGVFPLRGKLLNVRE
Sbjct: 427 SGIPKLEDANEAGGKDSDKCTLILTEGDSAKALAMSGIAVVGRDYYGVFPLRGKLLNVRE 486

Query: 543 ASHK 554
           A+HK
Sbjct: 487 ANHK 490


>gb|ADB28927.1| topoisomerase II-like protein [Zea mays subsp. mays]
          Length = 380

 Score =  265 bits (676), Expect = 5e-69
 Identities = 131/184 (71%), Positives = 150/184 (81%)
 Frame = +3

Query: 3   VNSIATIKGGSHVEYVTTQITSHXXXXXXXXXXXXXXXXXXXXSHVWIFVNALIDNPAFD 182
           VN IATI+GGSHV+YVT QI +H                    SH+W+FVNALIDNPAFD
Sbjct: 119 VNRIATIRGGSHVDYVTNQIANHVVAIVNKKNKNANMKLHNVKSHLWVFVNALIDNPAFD 178

Query: 183 SQTKETLTTRANSFGSKCELSQDLLKKVAKSGIVESLLSWADFKQSKDLKKTDGVKRGRI 362
           SQTKETLTTR  SFGSKCELS D LKKV KSG++E++LSWADFK SK+LKKTDG K+ RI
Sbjct: 179 SQTKETLTTRQGSFGSKCELSSDFLKKVEKSGVIENVLSWADFKLSKELKKTDGSKKSRI 238

Query: 363 IGITKLEDANDAGGRNSERCTLILTEGDSAKALAMAGISVVGRDSYGVFPLRGKLLNVRE 542
            GI KLEDAN+AGG++S++CTLILTEGDSAKALAM+GI+VVGRD YGVFPLRGKLLNVRE
Sbjct: 239 SGIPKLEDANEAGGKDSDKCTLILTEGDSAKALAMSGIAVVGRDYYGVFPLRGKLLNVRE 298

Query: 543 ASHK 554
           A+HK
Sbjct: 299 ANHK 302


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