BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021447
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR17838.1| unknown [Picea sitchensis]                             106   2e-21
ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containi...   104   8e-21
ref|NP_188975.3| pentatricopeptide repeat-containing protein [Ar...   102   3e-20
ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20
ref|XP_002883423.1| pentatricopeptide repeat-containing protein ...   100   9e-20

>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/140 (37%), Positives = 83/140 (59%)
 Frame = -2

Query: 427 VHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLN 248
           +H   I+ GF  +S+ V+G ++V+ Y KC ++ +A  LF    K +   WNA+ISGY+ +
Sbjct: 344 IHGYAIRSGF--ESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQH 401

Query: 247 HSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVIVV 68
              H+ + LF+EM    + PDS  +V +  +CA   +L+QG  IHGY    GF S+V+V 
Sbjct: 402 GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVG 461

Query: 67  NAMMDMYIKCGCMKKALVLF 8
             ++D+Y KCG +  A  LF
Sbjct: 462 TGLVDIYAKCGNVNTAQKLF 481



 Score =  104 bits (260), Expect = 6e-21
 Identities = 54/140 (38%), Positives = 81/140 (57%)
 Frame = -2

Query: 427 VHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLN 248
           +H   I+ G  I+SD+++   +V+ Y KC ++  A  LF        + WNA+I GY+LN
Sbjct: 243 IHCYAIRSG--IESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLN 300

Query: 247 HSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVIVV 68
              H+ +  F  M    + P+SITMV +  +CA L +L+QG  IHGY    GF S+ +V 
Sbjct: 301 SQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVG 360

Query: 67  NAMMDMYIKCGCMKKALVLF 8
           NA+++MY KCG +  A  LF
Sbjct: 361 NALVNMYAKCGNVNSAYKLF 380



 Score =  101 bits (252), Expect = 5e-20
 Identities = 55/142 (38%), Positives = 82/142 (57%)
 Frame = -2

Query: 433 RLVHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYN 254
           R VH  II +GF  +SD+++GT++   Y KC  ++ A  +F    K     WNA+I+GY+
Sbjct: 140 RKVHEDIIARGF--ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYS 197

Query: 253 LNHSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVI 74
            N   ++ + LF EM    + P+S T+V +   CA L +L+QG  IH Y    G  S V+
Sbjct: 198 QNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVL 257

Query: 73  VVNAMMDMYIKCGCMKKALVLF 8
           VVN +++MY KCG +  A  LF
Sbjct: 258 VVNGLVNMYAKCGNVNTAHKLF 279



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
 Frame = -2

Query: 427 VHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKP---------SASIWN 275
           +H+I     F       L TS V A  +   +K    + AC  +          +A +W 
Sbjct: 30  LHSISYHVCFYFYGPSPLPTSTVVAQLRRNKVKTTREVSACANQTQFTQTDIRNNAVVWK 89

Query: 274 AMISGYNLNHSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSK 95
             I GY  N   ++ ++L+ +M R  ++PD +  + + ++C     L+ G  +H    ++
Sbjct: 90  ETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIAR 149

Query: 94  GFGSHVIVVNAMMDMYIKCGCMKKALVLFN 5
           GF S VIV  A+  MY KCG ++ A  +F+
Sbjct: 150 GFESDVIVGTALASMYTKCGSLENARQVFD 179



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/114 (27%), Positives = 52/114 (45%)
 Frame = -2

Query: 427 VHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLN 248
           +H   I+ GF  +S++V+GT +VD Y KC ++  A  LF    +     W  MI  Y ++
Sbjct: 445 IHGYTIRSGF--ESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIH 502

Query: 247 HSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFG 86
                 + LF +M       D I    +  +C+  G + QG + +  C    +G
Sbjct: 503 GHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQG-LQYFQCMKSDYG 555


>ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  104 bits (259), Expect = 8e-21
 Identities = 53/144 (36%), Positives = 84/144 (58%)
 Frame = -2

Query: 433 RLVHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYN 254
           R++H+ II+K   ++S +VL T++VD Y KC  IK A  +F    K +   W AM+ G +
Sbjct: 367 RILHSCIIRK--ELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLS 424

Query: 253 LNHSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVI 74
            N      +KLF +M   +V+ +S+T+V L   CA LGSL +G  +H +    G+    +
Sbjct: 425 QNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAV 484

Query: 73  VVNAMMDMYIKCGCMKKALVLFNS 2
           + +A++DMY KCG +  A  LFN+
Sbjct: 485 ITSALIDMYAKCGKIHSAEKLFNN 508



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/139 (32%), Positives = 75/139 (53%)
 Frame = -2

Query: 424 HTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLNH 245
           H+ ++  G    +D+ + TS+VD Y    D  +A  +F      S   WNAMISGY  N 
Sbjct: 269 HSYVLALGMG--NDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNG 326

Query: 244 SVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVIVVN 65
            + +   LF  +++     DS T+V L + C++   L+ G ++H     K   SH+++  
Sbjct: 327 MIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLST 386

Query: 64  AMMDMYIKCGCMKKALVLF 8
           A++DMY KCG +K+A ++F
Sbjct: 387 AIVDMYSKCGAIKQATIVF 405



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 39/137 (28%), Positives = 72/137 (52%)
 Frame = -2

Query: 412 IKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLNHSVHQ 233
           +++GF++   + +G+SMV+   K   +  A  +F    +     WN++I GY       +
Sbjct: 172 VRRGFHLH--LYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWE 229

Query: 232 GMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVIVVNAMMD 53
            +++FLEM+   + P  +TM  L ++C + G  K G   H Y  + G G+ V V+ +++D
Sbjct: 230 SIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVD 289

Query: 52  MYIKCGCMKKALVLFNS 2
           MY   G    A ++F+S
Sbjct: 290 MYSNLGDTGSAALVFDS 306


>ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g23330 gi|11994318|dbj|BAB02277.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332643232|gb|AEE76753.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/141 (34%), Positives = 85/141 (60%)
 Frame = -2

Query: 427 VHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLN 248
           +H  +I+KG  IDSD+ +G+S+VD Y K   I+ +  +F+         WN++++GY  N
Sbjct: 264 IHGYVIRKG--IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321

Query: 247 HSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVIVV 68
              ++ ++LF +M+  +V P ++    +  +CA L +L  G  +HGY    GFGS++ + 
Sbjct: 322 GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA 381

Query: 67  NAMMDMYIKCGCMKKALVLFN 5
           +A++DMY KCG +K A  +F+
Sbjct: 382 SALVDMYSKCGNIKAARKIFD 402


>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/134 (36%), Positives = 77/134 (57%)
 Frame = -2

Query: 427 VHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLN 248
           +H  ++K+G  + SD+V+G++++  Y  C  IK A  +F CT      +WN+MI GYNL 
Sbjct: 356 MHNFVLKEG--LMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLV 413

Query: 247 HSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVIVV 68
                    F  +   E  P+ IT+V +   C ++G+L+QG  IHGY    G G +V V 
Sbjct: 414 GDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVG 473

Query: 67  NAMMDMYIKCGCMK 26
           N+++DMY KCG ++
Sbjct: 474 NSLIDMYSKCGFLE 487



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/144 (27%), Positives = 75/144 (52%)
 Frame = -2

Query: 439 LNRLVHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISG 260
           L   +    ++ GF  +SD+ +  +++D Y KC D   A  +F+         W+ +I+G
Sbjct: 251 LGMALQVCAVRSGF--ESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAG 308

Query: 259 YNLNHSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSH 80
           Y+ N    +  KL++ M+   ++ ++I    +  +  +L  LKQG  +H +   +G  S 
Sbjct: 309 YSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSD 368

Query: 79  VIVVNAMMDMYIKCGCMKKALVLF 8
           V+V +A++ MY  CG +K+A  +F
Sbjct: 369 VVVGSALIVMYANCGSIKEAESIF 392



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/135 (27%), Positives = 65/135 (48%)
 Frame = -2

Query: 439 LNRLVHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISG 260
           L R VH  +  K     +++ +  +++D + KC  ++ A  +F        + W A+I G
Sbjct: 151 LGRWVHETMHGK---TKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICG 207

Query: 259 YNLNHSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSH 80
              N    + + LF +M    + PDS+ +  +  +C  L ++K G  +       GF S 
Sbjct: 208 TMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESD 267

Query: 79  VIVVNAMMDMYIKCG 35
           + V NA++DMY KCG
Sbjct: 268 LYVSNAVIDMYCKCG 282


>ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297329263|gb|EFH59682.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 679

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/141 (32%), Positives = 86/141 (60%)
 Frame = -2

Query: 427 VHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLN 248
           +H  +I+KG  IDSD+ +G+S+VD Y K   I+ +  +F+   +  +  WN++++GY  N
Sbjct: 228 IHGYVIRKG--IDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQN 285

Query: 247 HSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVIVV 68
              ++ ++LF +M+  +V P ++    +  +CA L +L  G  +HGY    GFG ++ + 
Sbjct: 286 GRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIA 345

Query: 67  NAMMDMYIKCGCMKKALVLFN 5
           +A++DMY KCG ++ A  +F+
Sbjct: 346 SALVDMYSKCGNIQAARKIFD 366



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/129 (27%), Positives = 66/129 (51%)
 Frame = -2

Query: 427 VHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISGYNLN 248
           VH  I++ G  +D D+  G ++++ Y K L I +   +F    +     +N +I+GY  +
Sbjct: 127 VHGFIVRLG--MDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQS 184

Query: 247 HSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELGSLKQGSMIHGYCFSKGFGSHVIVV 68
                 +++  EM   ++ PD+ T+  +    +E   + +G  IHGY   KG  S V + 
Sbjct: 185 GMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIG 244

Query: 67  NAMMDMYIK 41
           ++++DMY K
Sbjct: 245 SSLVDMYAK 253



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/100 (30%), Positives = 54/100 (54%)
 Frame = -2

Query: 439 LNRLVHTIIIKKGFNIDSDIVLGTSMVDAYGKCLDIKAAIGLFACTRKPSASIWNAMISG 260
           L + +H  +++ GF    +I + +++VD Y KC +I+AA  +F          W A+I G
Sbjct: 325 LGKQLHGYVLRGGFG--RNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMG 382

Query: 259 YNLNHSVHQGMKLFLEMLRYEVSPDSITMVMLSQSCAELG 140
           + L+   H+ + LF EM R  V P+ +  V +  +C+ +G
Sbjct: 383 HALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 422