BLASTX nr result
ID: Aconitum21_contig00021420
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Aconitum21_contig00021420 (545 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 104 1e-20 ref|XP_003635371.1| PREDICTED: uncharacterized protein LOC100853... 101 7e-20 emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 97 1e-18 pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 92 7e-17 emb|CAN66028.1| hypothetical protein VITISV_020472 [Vitis vinifera] 85 8e-15 >gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] Length = 1384 Score = 104 bits (259), Expect = 1e-20 Identities = 69/215 (32%), Positives = 105/215 (48%), Gaps = 34/215 (15%) Frame = -3 Query: 543 ISSALARDTSISYDDLVALLFSAELRLKAHQLPAMESAPTAMYASKM------------- 403 +SSA ARD+ I+Y+ L LL SAE R+ + PA A++A++ Sbjct: 182 VSSAQARDSPITYEALEVLLLSAERRVSEYAHPAAAEGIHALHATQSRGRGRNSFISGRG 241 Query: 402 -----DSYS----------ARGRGV-----PNPXXXXXXXXXXXRNHFSISSNSGYQSNR 283 SYS +RGRG + + + NS + + R Sbjct: 242 GSNRGGSYSHGITNSGSAHSRGRGTFSHSRGSSGSRRSSILGPAPGTTTSNGNSFFNTGR 301 Query: 282 QPCQICGKTSHSAIDCYDRMNRSYEGRVPTKKLXXXXXXXXXTGYSNTWITDTGASAHIT 103 CQIC + HSAIDC++R+N SYEGRVP+ +L + TW+TDTGA++H+T Sbjct: 302 IQCQICSRPGHSAIDCFNRLNLSYEGRVPSSRLNAMTAHHSPS--EETWLTDTGANSHVT 359 Query: 102 PDLANLTIHDQYQGTDQV-AVGNGAGLQISNTGSA 1 P+L N+ Y+G D + + + +GL I + GS+ Sbjct: 360 PNLGNIDSPKSYKGLDNLGGINSDSGLSIKHIGSS 394 >ref|XP_003635371.1| PREDICTED: uncharacterized protein LOC100853190 [Vitis vinifera] Length = 251 Score = 101 bits (252), Expect = 7e-20 Identities = 63/198 (31%), Positives = 88/198 (44%), Gaps = 21/198 (10%) Frame = -3 Query: 537 SALARDTSISYDDLVALLFSAELRLK---------------------AHQLPAMESAPTA 421 S RD ++S++D A L S EL L+ Q P+ Sbjct: 49 SFATRDKNVSFEDFQAELLSYELLLENQNIAIPPETNNFAFFTPKSNQQQYNRKPKNPSK 108 Query: 420 MYASKMDSYSARGRGVPNPXXXXXXXXXXXRNHFSISSNSGYQSNRQPCQICGKTSHSAI 241 Y+ S + R R P P + H + + + PCQICGK SH A+ Sbjct: 109 PYSRPSFSQNPRPRYSPQPSGLPFSPQPNQKQH-------SFSTPKSPCQICGKLSHKAL 161 Query: 240 DCYDRMNRSYEGRVPTKKLXXXXXXXXXTGYSNTWITDTGASAHITPDLANLTIHDQYQG 61 DC+ MN +Y+GR P +L TW D+GA+ HIT +L +LT+ Y G Sbjct: 162 DCFHIMNYAYQGRHPPTQLAAMVANSNAEQEEETWFADSGANQHITANLEHLTLQQPYTG 221 Query: 60 TDQVAVGNGAGLQISNTG 7 + VAVGNG GL I++TG Sbjct: 222 QENVAVGNGQGLSIAHTG 239 >emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] Length = 1171 Score = 97.4 bits (241), Expect = 1e-18 Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 4/179 (2%) Frame = -3 Query: 528 ARDTSISYDDLVALLFSAELRLKAHQLPAMESAPTAMYA---SKMDSY-SARGRGVPNPX 361 +R+T +++D A L E L + P +A SK +Y +G +P P Sbjct: 188 SRETDFTFEDFQAELLGYENLLDVNHSVHNTDGPHFAFAANKSKAPTYVQKKGPPLP-PT 246 Query: 360 XXXXXXXXXXRNHFSISSNSGYQSNRQPCQICGKTSHSAIDCYDRMNRSYEGRVPTKKLX 181 R+ + S+ S +NR CQICGK+ H+AIDC+ R + SY+GR P + L Sbjct: 247 KMQNAASSNYRSQQTRSTPSQLPNNRPVCQICGKSGHTAIDCFHRFDYSYQGRFPPQDLA 306 Query: 180 XXXXXXXXTGYSNTWITDTGASAHITPDLANLTIHDQYQGTDQVAVGNGAGLQISNTGS 4 T W D+GA+AHIT D NLT + ++ V VGNG+GLQ+ NTGS Sbjct: 307 AMVAETNATFDHQVWYMDSGANAHITSDATNLTHQQPFCESETVTVGNGSGLQVLNTGS 365 >pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch gi|531389|gb|AAA57005.1| copia-like retrotransposon Hopscotch polyprotein [Zea mays] Length = 1439 Score = 91.7 bits (226), Expect = 7e-17 Identities = 61/190 (32%), Positives = 96/190 (50%), Gaps = 9/190 (4%) Frame = -3 Query: 543 ISSALARDTSISYDDLVALLFSAELR--LKAHQLPAMESAPTAMYASKMDSYS------- 391 +++ +AR I+ DL L S E R L+ M+S+ A + S+ Sbjct: 185 VTAVVARSDPITPGDLYTQLLSYENRMHLQTGSSSLMQSSANARSPGRGMSWGRSGGRGF 244 Query: 390 ARGRGVPNPXXXXXXXXXXXRNHFSISSNSGYQSNRQPCQICGKTSHSAIDCYDRMNRSY 211 +RGRG N++S ++++ S+R CQ+C + H+A++C+ R + +Y Sbjct: 245 SRGRGRGRGPSRGGFQSFGRGNNYSGATDAD-TSSRPRCQVCSRVGHTALNCWYRFDENY 303 Query: 210 EGRVPTKKLXXXXXXXXXTGYSNTWITDTGASAHITPDLANLTIHDQYQGTDQVAVGNGA 31 VP ++ G + W TDTGA+ HIT DL LT+HD+Y GTDQ+ NG Sbjct: 304 ---VPDQR--SANSAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGT 358 Query: 30 GLQISNTGSA 1 G+ ISN G+A Sbjct: 359 GMTISNIGNA 368 >emb|CAN66028.1| hypothetical protein VITISV_020472 [Vitis vinifera] Length = 823 Score = 84.7 bits (208), Expect = 8e-15 Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 4/179 (2%) Frame = -3 Query: 531 LARDTSISYDDLVALLFSAELRLKAHQ-LPAMESAPTAMYASKMDSYS-ARGRGVP-NPX 361 ++ DT ++++ A L E L +Q +P +S A A+K + + + +G P NP Sbjct: 139 VSHDTDFTFEEFQAELLGYENLLDVNQSVPGTDSNHFAFSANKSKAPTYVKKKGPPLNPT 198 Query: 360 XXXXXXXXXXRNHFSISSNSGYQSNRQPC-QICGKTSHSAIDCYDRMNRSYEGRVPTKKL 184 + H S S SN P QICGK H+AIDC+ + SY+GR P + L Sbjct: 199 KMQNVGSSNYQPHQQTISTSPQHSNYHPVXQICGKFGHTAIDCFHHFDYSYQGRFPPQDL 258 Query: 183 XXXXXXXXXTGYSNTWITDTGASAHITPDLANLTIHDQYQGTDQVAVGNGAGLQISNTG 7 T W D+GA+ HIT + NLT + ++ V + NG+ LQ+ NTG Sbjct: 259 IAMVAETNATFDHQVWYMDSGANTHITSNATNLTHQQSFHESETVNIENGSXLQVLNTG 317