BLASTX nr result

ID: Aconitum21_contig00021409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021409
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal doma...   103   1e-20
emb|CBI41034.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal doma...   103   1e-20
emb|CBI35709.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   100   1e-19

>ref|XP_003635453.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = -1

Query: 439 LGATCTGNYDSSVTHVVSTDAGTEKAKWAVKENKFLVHPRWIEAANYFWKRQPEEQFPVI 260
           LGATC    D SVTHVVSTDAGTEK++WA++E KFLVHP WIEAANYFW++QPEE FPV 
Sbjct: 214 LGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEENFPVN 273

Query: 259 NIQN 248
             +N
Sbjct: 274 QKKN 277


>emb|CBI41034.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = -1

Query: 439 LGATCTGNYDSSVTHVVSTDAGTEKAKWAVKENKFLVHPRWIEAANYFWKRQPEEQFPVI 260
           LGATC    D SVTHVVSTDAGTEK++WA++E KFLVHP WIEAANYFW++QPEE FPV 
Sbjct: 200 LGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEENFPVN 259

Query: 259 NIQN 248
             +N
Sbjct: 260 QKKN 263


>ref|XP_003634864.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Vitis vinifera]
          Length = 278

 Score =  103 bits (257), Expect = 1e-20
 Identities = 46/64 (71%), Positives = 53/64 (82%)
 Frame = -1

Query: 439 LGATCTGNYDSSVTHVVSTDAGTEKAKWAVKENKFLVHPRWIEAANYFWKRQPEEQFPVI 260
           LGATC    D SVTHVVSTDAGTEK++WA++E KFLVHP WIEAANYFW++QPEE FPV 
Sbjct: 214 LGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEENFPVN 273

Query: 259 NIQN 248
             +N
Sbjct: 274 QKKN 277


>emb|CBI35709.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  103 bits (256), Expect = 2e-20
 Identities = 45/59 (76%), Positives = 51/59 (86%)
 Frame = -1

Query: 439 LGATCTGNYDSSVTHVVSTDAGTEKAKWAVKENKFLVHPRWIEAANYFWKRQPEEQFPV 263
           LGATC    D SVTHVVSTDAGTEK++WA++E KFLVHP WIEAANYFW++QPEE FPV
Sbjct: 200 LGATCATELDPSVTHVVSTDAGTEKSRWALQEKKFLVHPGWIEAANYFWQKQPEENFPV 258


>ref|XP_004172979.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 4-like, partial [Cucumis sativus]
          Length = 340

 Score =  100 bits (249), Expect = 1e-19
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = -1

Query: 439 LGATCTGNYDSSVTHVVSTDAGTEKAKWAVKENKFLVHPRWIEAANYFWKRQPEEQFPV 263
           LG TC+   D SVTHVV+TDAGTEK++WA+KE KFLVHPRWIEA+NYFWKRQ EE F V
Sbjct: 271 LGGTCSTELDQSVTHVVATDAGTEKSRWALKEKKFLVHPRWIEASNYFWKRQMEENFTV 329


Top