BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021327
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   395   e-108
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]   392   e-107
ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatul...   369   e-100
ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chlor...   367   2e-99
ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group] g...   364   1e-98

>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  395 bits (1014), Expect = e-108
 Identities = 197/264 (74%), Positives = 224/264 (84%), Gaps = 1/264 (0%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGILHHCTLPTIAVQNNDIHSESEDGSDVELDGSLDEQSSFMAISN 181
           VVHPAPGNA+GTLVNGILHHC+LPT+A+ N D  SE +D SD       DE +SF A  N
Sbjct: 162 VVHPAPGNASGTLVNGILHHCSLPTVALPNRD--SEEDDISD-------DEFNSFAAGQN 212

Query: 182 -NINGSSVRPGIVHRLDKGTSGVLVVAKDEHSHAHLSEQFKQHTIHRVYISLTSGVPSPI 358
                +++RPGIVHRLDKGTSG+LVVAKDEHSHAHLSEQFK H+IHRVYISLTSGVP+P+
Sbjct: 213 CGTCETNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPL 272

Query: 359 SGRIEVPIGRDINNRIRMVAIPGSNNSRQARQAASRYKVLEVLAGGGSALVEWRLETGRT 538
           SGR+E+P+GRD NNRIRM A+PG +NS QAR AASRYKV+E+LA GGSALVEWRLETGRT
Sbjct: 273 SGRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRT 332

Query: 539 HQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRIIPSHRGDLAKLVSKLDRPCLHAFSL 718
           HQIRAHAKYLGIPLLGDEVYGGTK+MALSLL+PRI  SH G LA+LVS+LDRPCLHA +L
Sbjct: 333 HQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVAL 392

Query: 719 GFKHPHTGEKMQFSCPPPADFAEI 790
           GF HP TG+ + FSC PP DFAEI
Sbjct: 393 GFNHPKTGKNVHFSCQPPEDFAEI 416


>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
          Length = 611

 Score =  392 bits (1008), Expect = e-107
 Identities = 196/264 (74%), Positives = 223/264 (84%), Gaps = 1/264 (0%)
 Frame = +2

Query: 2    VVHPAPGNANGTLVNGILHHCTLPTIAVQNNDIHSESEDGSDVELDGSLDEQSSFMAISN 181
            VVHPAPGNA+GTLVNGILHHC+LPT+A+ N D  SE +D  D       DE +SF A  N
Sbjct: 308  VVHPAPGNASGTLVNGILHHCSLPTVALPNRD--SEEDDILD-------DEFNSFAAGQN 358

Query: 182  -NINGSSVRPGIVHRLDKGTSGVLVVAKDEHSHAHLSEQFKQHTIHRVYISLTSGVPSPI 358
                 +++RPGIVHRLDKGTSG+LVVAKDEHSHAHLSEQFK H+IHRVYISLTSGVP+P+
Sbjct: 359  CGTCETNIRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPL 418

Query: 359  SGRIEVPIGRDINNRIRMVAIPGSNNSRQARQAASRYKVLEVLAGGGSALVEWRLETGRT 538
            SGR+E+P+GRD NNRIRM A+PG +NS QAR AASRYKV+E+LA GGSALVEWRLETGRT
Sbjct: 419  SGRVEIPVGRDPNNRIRMTAVPGPSNSGQARHAASRYKVIEILAAGGSALVEWRLETGRT 478

Query: 539  HQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRIIPSHRGDLAKLVSKLDRPCLHAFSL 718
            HQIRAHAKYLGIPLLGDEVYGGTK+MALSLL+PRI  SH G LA+LVS+LDRPCLHA +L
Sbjct: 479  HQIRAHAKYLGIPLLGDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVAL 538

Query: 719  GFKHPHTGEKMQFSCPPPADFAEI 790
            GF HP TG+ + FSC PP DFAEI
Sbjct: 539  GFNHPKTGKNVHFSCQPPEDFAEI 562


>ref|XP_003603819.1| RNA pseudourine synthase [Medicago truncatula]
           gi|355492867|gb|AES74070.1| RNA pseudourine synthase
           [Medicago truncatula]
          Length = 465

 Score =  369 bits (948), Expect = e-100
 Identities = 177/263 (67%), Positives = 215/263 (81%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGILHHCTLPTIAVQNNDIHSESEDGSDVELDGSLDEQSSFMAISN 181
           VVHPAPGN +GTLVNGILHHC LP +     +  S++ED SD EL+G   + SS + + +
Sbjct: 180 VVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEALSDTED-SDDELNGFSSQSSSSVGLDS 238

Query: 182 NINGSSVRPGIVHRLDKGTSGVLVVAKDEHSHAHLSEQFKQHTIHRVYISLTSGVPSPIS 361
            ++ +S+RPGIVHRLDKGTSG+LVVAK+EHSH  LSEQFK  TI RVY+SLT+GVP+P+S
Sbjct: 239 RLSMASIRPGIVHRLDKGTSGLLVVAKNEHSHMKLSEQFKLRTIKRVYVSLTAGVPTPVS 298

Query: 362 GRIEVPIGRDINNRIRMVAIPGSNNSRQARQAASRYKVLEVLAGGGSALVEWRLETGRTH 541
           GR+EVP+GRD NNR+RM+A+ G  NS +AR AASRYKV+E+LAGG  ALVEW+LETGRTH
Sbjct: 299 GRVEVPVGRDPNNRLRMIAVAGLVNSVKARHAASRYKVIEILAGGSCALVEWKLETGRTH 358

Query: 542 QIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRIIPSHRGDLAKLVSKLDRPCLHAFSLG 721
           QIRAHAKYLG+PLLGDEVYGGTKSM LSLL+PR  PS   ++ K VS LDRPCLHA +LG
Sbjct: 359 QIRAHAKYLGVPLLGDEVYGGTKSMVLSLLRPRTTPSLHSEMFKTVSGLDRPCLHASTLG 418

Query: 722 FKHPHTGEKMQFSCPPPADFAEI 790
           F+HPHTGE++ FSC PP DF +I
Sbjct: 419 FQHPHTGEQVHFSCEPPVDFNDI 441


>ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Glycine
           max]
          Length = 450

 Score =  367 bits (942), Expect = 2e-99
 Identities = 176/268 (65%), Positives = 218/268 (81%), Gaps = 5/268 (1%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGILHHCTLPTIAVQNNDIHSESEDGSD-----VELDGSLDEQSSF 166
           VVHPAPGN +GTLVNGILHHC LP +    ++  S++ED  D     + L  S +  +S 
Sbjct: 167 VVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDEFNSYISLASSCEGLNSR 226

Query: 167 MAISNNINGSSVRPGIVHRLDKGTSGVLVVAKDEHSHAHLSEQFKQHTIHRVYISLTSGV 346
           +++++N    S+RPGIVHRLDKGTSG+LVVAKDEHSH  LSEQFKQ TI R+Y+SLT+GV
Sbjct: 227 LSVASN----SIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRTIKRLYVSLTAGV 282

Query: 347 PSPISGRIEVPIGRDINNRIRMVAIPGSNNSRQARQAASRYKVLEVLAGGGSALVEWRLE 526
           P+P++GR+EVP+GRD NNRIRM A+ G  NS++AR AASRYKV+E+LAGG  +LVEW+LE
Sbjct: 283 PTPVAGRVEVPVGRDTNNRIRMTAVTGPVNSKKARYAASRYKVIEILAGGSCSLVEWKLE 342

Query: 527 TGRTHQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRIIPSHRGDLAKLVSKLDRPCLH 706
           TGRTHQIRAHAKYLG+PLLGDE+YGGTKSM LSLL+PR   S    + K+VS+LDRPCLH
Sbjct: 343 TGRTHQIRAHAKYLGVPLLGDELYGGTKSMVLSLLRPRTPISLHSKIVKMVSRLDRPCLH 402

Query: 707 AFSLGFKHPHTGEKMQFSCPPPADFAEI 790
           A++LGF+HPHTGE++ FSC PPADFAEI
Sbjct: 403 AWTLGFQHPHTGEQVHFSCEPPADFAEI 430


>ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group]
           gi|75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA
           pseudourine synthase 2, chloroplastic; AltName: Full=RNA
           pseudouridylate synthase 2; AltName: Full=RNA-uridine
           isomerase 2; Flags: Precursor
           gi|53791796|dbj|BAD53590.1| ribosomal large subunit
           pseudouridine synthase-like [Oryza sativa Japonica
           Group] gi|54291043|dbj|BAD61720.1| ribosomal large
           subunit pseudouridine synthase-like [Oryza sativa
           Japonica Group] gi|113596634|dbj|BAF20508.1|
           Os06g0717400 [Oryza sativa Japonica Group]
           gi|215706335|dbj|BAG93191.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222636236|gb|EEE66368.1| hypothetical protein
           OsJ_22675 [Oryza sativa Japonica Group]
          Length = 445

 Score =  364 bits (934), Expect = 1e-98
 Identities = 183/264 (69%), Positives = 209/264 (79%), Gaps = 1/264 (0%)
 Frame = +2

Query: 2   VVHPAPGNANGTLVNGILHHCTLPTIA-VQNNDIHSESEDGSDVELDGSLDEQSSFMAIS 178
           VVHPAPGNANGTLVN ILHHC + T   +  N I  E  D SD ++D    +Q +   +S
Sbjct: 159 VVHPAPGNANGTLVNAILHHCKISTFTCLARNSIDDECPDSSDDDIDVFDIDQFTTGEVS 218

Query: 179 NNINGSSVRPGIVHRLDKGTSGVLVVAKDEHSHAHLSEQFKQHTIHRVYISLTSGVPSPI 358
           + +  + VRPGIVHRLDKGTSG+LVVAKDEHSHA L+EQFK HTI RVYISLT G P+P 
Sbjct: 219 SEVREALVRPGIVHRLDKGTSGLLVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPN 278

Query: 359 SGRIEVPIGRDINNRIRMVAIPGSNNSRQARQAASRYKVLEVLAGGGSALVEWRLETGRT 538
           SGRIEVPI RD NNRIRM+A PGS + R AR AASRYKV EV AGGGSALVEWRLETGRT
Sbjct: 279 SGRIEVPIARDPNNRIRMIATPGSGH-RYARHAASRYKVREVFAGGGSALVEWRLETGRT 337

Query: 539 HQIRAHAKYLGIPLLGDEVYGGTKSMALSLLQPRIIPSHRGDLAKLVSKLDRPCLHAFSL 718
           HQIRAHAKYLGIPLLGDE YGGTKSMALSLL+PR    +  DL+ ++SK+DRPCLHA  L
Sbjct: 338 HQIRAHAKYLGIPLLGDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALL 397

Query: 719 GFKHPHTGEKMQFSCPPPADFAEI 790
           GFKHPH+G+ ++FSCPPP DF E+
Sbjct: 398 GFKHPHSGKILEFSCPPPDDFTEV 421