BLASTX nr result

ID: Aconitum21_contig00021114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021114
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19832.3| unnamed protein product [Vitis vinifera]              167   1e-39
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   167   1e-39
ref|XP_003590744.1| Pentatricopeptide repeat-containing protein ...   157   7e-37
ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36

>emb|CBI19832.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/91 (84%), Positives = 82/91 (90%)
 Frame = -2

Query: 427 VPDTKFALHDVGLEQKEYGLSTHSEKLAVGYGLLKLPHKATVRVLKNLRICGDCHTVFKF 248
           +PDTKF LHD+  EQKEY LSTHSEKLAVG+GLLKLP  ATVRV KNLRICGDCH  FKF
Sbjct: 454 IPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKF 513

Query: 247 ISKVVEREIVVRDGKRFHHFKDGECSCGNYW 155
           +SKVVEREIVVRDGKRFHHFK+GECSCGNYW
Sbjct: 514 MSKVVEREIVVRDGKRFHHFKNGECSCGNYW 544


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/91 (84%), Positives = 82/91 (90%)
 Frame = -2

Query: 427 VPDTKFALHDVGLEQKEYGLSTHSEKLAVGYGLLKLPHKATVRVLKNLRICGDCHTVFKF 248
           +PDTKF LHD+  EQKEY LSTHSEKLAVG+GLLKLP  ATVRV KNLRICGDCH  FKF
Sbjct: 709 IPDTKFVLHDMESEQKEYVLSTHSEKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKF 768

Query: 247 ISKVVEREIVVRDGKRFHHFKDGECSCGNYW 155
           +SKVVEREIVVRDGKRFHHFK+GECSCGNYW
Sbjct: 769 MSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799


>ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355479792|gb|AES60995.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  157 bits (398), Expect = 7e-37
 Identities = 72/91 (79%), Positives = 79/91 (86%)
 Frame = -2

Query: 427 VPDTKFALHDVGLEQKEYGLSTHSEKLAVGYGLLKLPHKATVRVLKNLRICGDCHTVFKF 248
           VPDTKF LHD+  E KE+ LSTHSEKLAV YG++KLP  AT+RV KNLRICGDCH  FK+
Sbjct: 705 VPDTKFVLHDMESEHKEHSLSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKY 764

Query: 247 ISKVVEREIVVRDGKRFHHFKDGECSCGNYW 155
           ISKVVEREIVVRD KRFHHFK+GECSCGNYW
Sbjct: 765 ISKVVEREIVVRDRKRFHHFKNGECSCGNYW 795


>ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  156 bits (395), Expect = 1e-36
 Identities = 70/91 (76%), Positives = 79/91 (86%)
 Frame = -2

Query: 427 VPDTKFALHDVGLEQKEYGLSTHSEKLAVGYGLLKLPHKATVRVLKNLRICGDCHTVFKF 248
           VPDTKF LHD+  EQKEY LSTHSEKLAV YG++KLP  AT+RV KNLRICGDCH  FK+
Sbjct: 692 VPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKLPLGATIRVFKNLRICGDCHNAFKY 751

Query: 247 ISKVVEREIVVRDGKRFHHFKDGECSCGNYW 155
           ISKVV+REI+VRD KRFHHF++GECSC NYW
Sbjct: 752 ISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782


>ref|XP_002302000.1| predicted protein [Populus trichocarpa] gi|222843726|gb|EEE81273.1|
           predicted protein [Populus trichocarpa]
          Length = 797

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/91 (78%), Positives = 78/91 (85%)
 Frame = -2

Query: 427 VPDTKFALHDVGLEQKEYGLSTHSEKLAVGYGLLKLPHKATVRVLKNLRICGDCHTVFKF 248
           VPDTK  LHDV  + KE+ LSTHSEKLAV YG +KLPH ATVRV KNLRICGDCH  FKF
Sbjct: 707 VPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFKNLRICGDCHNAFKF 766

Query: 247 ISKVVEREIVVRDGKRFHHFKDGECSCGNYW 155
           +SKVV REIVVRDGKRFHHF+DG+CSCG+YW
Sbjct: 767 MSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797


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