BLASTX nr result

ID: Aconitum21_contig00021088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00021088
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75737.1| hypothetical protein VITISV_025902 [Vitis vinifera]   179   3e-43
ref|XP_002323351.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_002531585.1| sigma factor sigb regulation protein rsbq, p...   177   1e-42
ref|XP_002276657.1| PREDICTED: sigma factor sigB regulation prot...   174   1e-41
ref|XP_002284715.1| PREDICTED: sigma factor sigB regulation prot...   170   2e-40

>emb|CAN75737.1| hypothetical protein VITISV_025902 [Vitis vinifera]
          Length = 270

 Score =  179 bits (454), Expect = 3e-43
 Identities = 90/161 (55%), Positives = 112/161 (69%)
 Frame = -3

Query: 553 IAAAERPELFKHLVLLNASPRYLNDTDYNGGFERSHLEALFNDMEKDFNGWATNFAPHAV 374
           IAA +RP+LF+HL+LL  SPRYLN   Y GGFERS ++ +F  + ++F  W  NFAP AV
Sbjct: 107 IAATKRPDLFEHLILLGGSPRYLNAEGYYGGFERSAIDKIFEAINENFPVWVQNFAPMAV 166

Query: 373 GTSDTNTIQEFTKSLQRMKASTALEVAKTIFLGDYRDVLQQVKVPCTIIQSEKDIVVPIS 194
           G +++  I EF  SL RMK   AL VAKT+FL D R VL QVKVPCTIIQS +DIV P  
Sbjct: 167 GINNSAAIAEFENSLGRMKQEIALSVAKTVFLSDLRLVLPQVKVPCTIIQSREDIVAPTF 226

Query: 193 VPSYLNTNLGGSTKVEILKTEGHLPQLTACTLLVDVLEKIL 71
           +  Y+  NLGG   V+IL+T GH PQLTA  LL+D L ++L
Sbjct: 227 IACYMKENLGGDATVKILETRGHFPQLTAFPLLLDALNQVL 267


>ref|XP_002323351.1| predicted protein [Populus trichocarpa] gi|222867981|gb|EEF05112.1|
           predicted protein [Populus trichocarpa]
          Length = 276

 Score =  177 bits (449), Expect = 1e-42
 Identities = 86/161 (53%), Positives = 113/161 (70%)
 Frame = -3

Query: 553 IAAAERPELFKHLVLLNASPRYLNDTDYNGGFERSHLEALFNDMEKDFNGWATNFAPHAV 374
           IA+ +RPELF+HLVLL  SPRYL++  YNGGF RS + A+F  M +++  W   FAP A+
Sbjct: 113 IASIKRPELFRHLVLLGGSPRYLDEKGYNGGFTRSEINAIFKHMHQNYTSWVQAFAPTAI 172

Query: 373 GTSDTNTIQEFTKSLQRMKASTALEVAKTIFLGDYRDVLQQVKVPCTIIQSEKDIVVPIS 194
           G ++T    EF  SL+RMK   AL VAKT+FL D+R +L +V VPCTIIQS++D +VP S
Sbjct: 173 GMNNTRATTEFKNSLRRMKPRIALSVAKTVFLSDWRSILPEVLVPCTIIQSKRDPIVPNS 232

Query: 193 VPSYLNTNLGGSTKVEILKTEGHLPQLTACTLLVDVLEKIL 71
           V  Y+  NL G  +V+IL T GH PQLTA  LL+ VL++ L
Sbjct: 233 VAYYMKRNLNGHARVKILDTGGHFPQLTAYNLLLKVLKRFL 273


>ref|XP_002531585.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
           communis] gi|223528781|gb|EEF30788.1| sigma factor sigb
           regulation protein rsbq, putative [Ricinus communis]
          Length = 279

 Score =  177 bits (448), Expect = 1e-42
 Identities = 90/159 (56%), Positives = 109/159 (68%)
 Frame = -3

Query: 550 AAAERPELFKHLVLLNASPRYLNDTDYNGGFERSHLEALFNDMEKDFNGWATNFAPHAVG 371
           AA +RP LF+HLVLL  SPRYLN   Y+GGFERS ++A+   M  +F+ W   FAP AVG
Sbjct: 111 AALQRPHLFQHLVLLGGSPRYLNAEGYHGGFERSDVKAILRSMNHNFSSWVQGFAPVAVG 170

Query: 370 TSDTNTIQEFTKSLQRMKASTALEVAKTIFLGDYRDVLQQVKVPCTIIQSEKDIVVPISV 191
            ++T  I  F  SL RMK S A  VAKT+FL D R +L QV VPCTIIQS+KDI+VP  V
Sbjct: 171 MNNTEAITIFANSLGRMKPSIAHSVAKTVFLSDLRRILPQVSVPCTIIQSKKDIIVPEFV 230

Query: 190 PSYLNTNLGGSTKVEILKTEGHLPQLTACTLLVDVLEKI 74
             Y+   LGG  KV+ILKTEGH P LTA  LL+  L+K+
Sbjct: 231 AHYMKKKLGGYAKVKILKTEGHFPHLTAYPLLLKALKKV 269


>ref|XP_002276657.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis
           vinifera] gi|297739783|emb|CBI29965.3| unnamed protein
           product [Vitis vinifera]
          Length = 270

 Score =  174 bits (440), Expect = 1e-41
 Identities = 87/161 (54%), Positives = 110/161 (68%)
 Frame = -3

Query: 553 IAAAERPELFKHLVLLNASPRYLNDTDYNGGFERSHLEALFNDMEKDFNGWATNFAPHAV 374
           IAA +RP+LF+HL+LL  SPRYLN   Y GGFERS ++ +F  + ++F  W  NF P AV
Sbjct: 107 IAATKRPDLFEHLILLGGSPRYLNAEGYYGGFERSDIDKIFEAINENFPVWVQNFVPMAV 166

Query: 373 GTSDTNTIQEFTKSLQRMKASTALEVAKTIFLGDYRDVLQQVKVPCTIIQSEKDIVVPIS 194
           G +++  I EF  SL RMK    L VAKT+FL D R VL QVKVPCTIIQS +DIV P  
Sbjct: 167 GINNSAAIAEFEYSLGRMKPEIVLSVAKTVFLSDLRLVLPQVKVPCTIIQSREDIVAPTF 226

Query: 193 VPSYLNTNLGGSTKVEILKTEGHLPQLTACTLLVDVLEKIL 71
           +  Y+  NLG    V+IL+T+GH PQLTA  LL+D L ++L
Sbjct: 227 IACYMKENLGDDATVKILETQGHFPQLTAFPLLLDALNQVL 267


>ref|XP_002284715.1| PREDICTED: sigma factor sigB regulation protein rsbQ isoform 2
           [Vitis vinifera]
          Length = 269

 Score =  170 bits (430), Expect = 2e-40
 Identities = 80/161 (49%), Positives = 112/161 (69%)
 Frame = -3

Query: 553 IAAAERPELFKHLVLLNASPRYLNDTDYNGGFERSHLEALFNDMEKDFNGWATNFAPHAV 374
           IA+ +RPELFK L+ + ASPRYLN  +Y GGFERS +E +F ++E DF+ WA+NFAP AV
Sbjct: 100 IASIKRPELFKRLIFIAASPRYLNANNYEGGFERSEIEQIFANIESDFDKWASNFAPLAV 159

Query: 373 GTSDTNTIQEFTKSLQRMKASTALEVAKTIFLGDYRDVLQQVKVPCTIIQSEKDIVVPIS 194
             +D  ++++  K ++RM+   AL +AKT+F  D+RD+L +V  PCTI+Q   DIV PIS
Sbjct: 160 DVNDPLSVEKVEKCIRRMRPEVALPLAKTVFCCDHRDILDKVTTPCTIVQPTNDIVAPIS 219

Query: 193 VPSYLNTNLGGSTKVEILKTEGHLPQLTACTLLVDVLEKIL 71
           V  Y+   + G T VEI+  +GH PQLTA   L+ VL+ +L
Sbjct: 220 VAEYMQKKIKGKTTVEIIDMDGHFPQLTAHLQLLSVLDSVL 260


Top