BLASTX nr result

ID: Aconitum21_contig00019569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019569
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex su...   189   2e-46
emb|CBI24630.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...   188   5e-46
ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT tra...   184   9e-45
ref|XP_003633901.1| PREDICTED: CCR4-NOT transcription complex su...   181   6e-44

>ref|XP_002270543.2| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 1586

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/141 (66%), Positives = 119/141 (84%)
 Frame = +1

Query: 1    SHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTPSQSSFSVSQM 180
            SHPGGH ++++QY + LHLASG L +D+K+A+LSL +RLP+GQGL+Q+ P+QS +SV Q+
Sbjct: 1367 SHPGGHLNVMTQYPSGLHLASGSLTEDDKIATLSLGDRLPTGQGLSQVPPAQSPYSVGQI 1426

Query: 181  PAQIPNIRTQIILNPKLNALGLKMHFQSILPSAMERAIKEIMTPVVQRSVTIAMQSTREL 360
            PA IPNI + II N KL ALGL  +FQ ++P AMERAIK+IM P+VQRSVTIA Q+T+EL
Sbjct: 1427 PAPIPNIGSHIIFNQKLGALGLH-YFQRVVPIAMERAIKDIMAPIVQRSVTIATQTTKEL 1485

Query: 361  VLKDFEMESDESRIYNAAHLM 423
            VLKD+ MESDESRIYNAAHLM
Sbjct: 1486 VLKDYAMESDESRIYNAAHLM 1506


>emb|CBI24630.3| unnamed protein product [Vitis vinifera]
          Length = 1496

 Score =  189 bits (481), Expect = 2e-46
 Identities = 94/141 (66%), Positives = 119/141 (84%)
 Frame = +1

Query: 1    SHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTPSQSSFSVSQM 180
            SHPGGH ++++QY + LHLASG L +D+K+A+LSL +RLP+GQGL+Q+ P+QS +SV Q+
Sbjct: 1255 SHPGGHLNVMTQYPSGLHLASGSLTEDDKIATLSLGDRLPTGQGLSQVPPAQSPYSVGQI 1314

Query: 181  PAQIPNIRTQIILNPKLNALGLKMHFQSILPSAMERAIKEIMTPVVQRSVTIAMQSTREL 360
            PA IPNI + II N KL ALGL  +FQ ++P AMERAIK+IM P+VQRSVTIA Q+T+EL
Sbjct: 1315 PAPIPNIGSHIIFNQKLGALGLH-YFQRVVPIAMERAIKDIMAPIVQRSVTIATQTTKEL 1373

Query: 361  VLKDFEMESDESRIYNAAHLM 423
            VLKD+ MESDESRIYNAAHLM
Sbjct: 1374 VLKDYAMESDESRIYNAAHLM 1394


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score =  188 bits (477), Expect = 5e-46
 Identities = 89/138 (64%), Positives = 118/138 (85%)
 Frame = +1

Query: 10   GGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTPSQSSFSVSQMPAQ 189
            G HAH+LSQYT+P+HL+SG L++DEK+A+L LS++LPS QGL Q TPSQS+F  SQ+P  
Sbjct: 1204 GVHAHMLSQYTSPVHLSSGTLMEDEKLAALGLSDQLPSAQGLFQATPSQSTFPASQLPTA 1263

Query: 190  IPNIRTQIILNPKLNALGLKMHFQSILPSAMERAIKEIMTPVVQRSVTIAMQSTRELVLK 369
            IPNI T +I+N KLN+ GL +HFQ ++P+ M+RAIK+I++ +VQRSV+IA Q+T+ELVLK
Sbjct: 1264 IPNIGTHVIINQKLNSWGLHVHFQRLVPTVMDRAIKDIVSGIVQRSVSIATQTTKELVLK 1323

Query: 370  DFEMESDESRIYNAAHLM 423
            D+ MESDE+RIYNAAHLM
Sbjct: 1324 DYAMESDETRIYNAAHLM 1341


>ref|XP_004134286.1| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex
            subunit 1-like [Cucumis sativus]
          Length = 2427

 Score =  184 bits (466), Expect = 9e-45
 Identities = 87/141 (61%), Positives = 117/141 (82%)
 Frame = +1

Query: 1    SHPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTPSQSSFSVSQM 180
            S+ G H HLLSQY  PLHL+SG L++DEK+++L LS++LP+ QGL Q TPS S FS +Q+
Sbjct: 1244 SNSGNHTHLLSQYATPLHLSSGTLMEDEKLSALGLSDQLPTAQGLLQATPSPSPFSTNQL 1303

Query: 181  PAQIPNIRTQIILNPKLNALGLKMHFQSILPSAMERAIKEIMTPVVQRSVTIAMQSTREL 360
            PA IPNI + +++N KLN+LGL +HFQ  +P AM+RA+KEI++ +VQRSV+IA Q+T+EL
Sbjct: 1304 PAGIPNIGSLVVINQKLNSLGLHIHFQRAVPIAMDRAVKEIVSGIVQRSVSIATQTTKEL 1363

Query: 361  VLKDFEMESDESRIYNAAHLM 423
            VLKD+ MESDE+RI+NAAHLM
Sbjct: 1364 VLKDYAMESDETRIFNAAHLM 1384


>ref|XP_003633901.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis
            vinifera]
          Length = 2333

 Score =  181 bits (459), Expect = 6e-44
 Identities = 89/140 (63%), Positives = 110/140 (78%)
 Frame = +1

Query: 4    HPGGHAHLLSQYTAPLHLASGLLVDDEKMASLSLSERLPSGQGLTQLTPSQSSFSVSQMP 183
            H GGH HLLSQY AP HL +G L++DEK+ +L LS++LPS QGL Q TPSQ  FSVSQ  
Sbjct: 1166 HTGGHTHLLSQYAAPFHLPTGTLMEDEKLVALRLSDQLPSAQGLLQATPSQLPFSVSQPT 1225

Query: 184  AQIPNIRTQIILNPKLNALGLKMHFQSILPSAMERAIKEIMTPVVQRSVTIAMQSTRELV 363
              IPNI T +I+N K++ALGL +HFQ + P AM+RAIKEI++ +VQRSV IA Q+T+ELV
Sbjct: 1226 TLIPNIGTHVIINQKISALGLHLHFQRVAPIAMDRAIKEILSGMVQRSVNIASQTTKELV 1285

Query: 364  LKDFEMESDESRIYNAAHLM 423
            LKD+ MESDE+ IYNAAH M
Sbjct: 1286 LKDYAMESDEALIYNAAHAM 1305


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