BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019400
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17549.3| unnamed protein product [Vitis vinifera]              255   1e-65
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       252   1e-64
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   250   4e-64
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   250   4e-64
ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|2...   248   2e-63

>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  255 bits (652), Expect = 1e-65
 Identities = 169/385 (43%), Positives = 215/385 (55%), Gaps = 47/385 (12%)
 Frame = -2

Query: 1019 APVNRPP---PRSSKFLPKLVPKQEPQPNLPKPSK-------NPQQQD------------ 906
            APV RP    P+SSK  PKL+PK EP    P+PSK       N +++D            
Sbjct: 12   APVRRPSRFAPKSSK--PKLIPKPEPSSQ-PEPSKLDDVTLINKKEEDSQPPLVKKADEP 68

Query: 905  ---------LPMEDHQEPPIPEPMLDDEQDQEDPVVREIDVFFTPR-LDAGAGLYVLQCP 756
                     + ME   +  + + M +D++D EDPVVREIDVFFTP   D    +YVLQ P
Sbjct: 69   FASSTQNGVIEMEVEAKAEVEDAMEEDDRD-EDPVVREIDVFFTPPPTDDNTKIYVLQYP 127

Query: 755  LRPLWRPYEFRDKCQEVRVNPKEGMLEVDLSVDTGS-NYDHDAPDRLQIEKQTL-FSQRV 582
            LRP WRPYE  ++C EVRV P    +EVDLS+D  S NYD DAP+  +++KQTL  S + 
Sbjct: 128  LRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKP 187

Query: 581  PLETSYAVGVLAGSKLVLNPVDAVMQLRPSMAHLAPQGLKRSN----------AAEEING 432
            P  T Y VGVL G+KL LNP+ AV+QLRPSM +L+  G KR N            E  N 
Sbjct: 188  PQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKNNVTGDTNSAVKLEVSNE 247

Query: 431  GKDSGSAKKQGKAKTVKDAAAAGXXXXXXXXXXXXSWISLDYHGMDSLVSSRYQKKMTSQ 252
             +  GS KKQ K   + D                 SW+ L YH  +S  S+RY +KM ++
Sbjct: 248  EESVGSLKKQNKIMGILD---------EQNTDAAESWVPLKYHSSESDFSARYLQKMVAE 298

Query: 251  ESSEIQFSMNPSEYIKSLCPASAGVQNEEGSG---SIRSLLSMPLEARLKKWLFEGPQLK 81
            ++S IQF M+P EY+ SLCP   GV N++      S R LLSMPLE R K  L EGP + 
Sbjct: 299  DNSPIQFLMSPYEYVNSLCP--PGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVH 356

Query: 80   RFSAAKHLAPNESNATVLEILQQHA 6
            RFSA KH AP+ S   VL +L +HA
Sbjct: 357  RFSALKHFAPDNSVEDVLGVLTKHA 381


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  252 bits (644), Expect = 1e-64
 Identities = 144/309 (46%), Positives = 186/309 (60%), Gaps = 8/309 (2%)
 Frame = -2

Query: 908 DLPMEDHQEPPIPEPMLDDEQDQEDPVVREIDVFFTPRLDAGAGLYVLQCPLRPLWRPYE 729
           D  +E+  E P  EPM +  ++ ED +VREIDV+ TP +D    LYVLQ PLRPLWRPYE
Sbjct: 82  DAKVEEEAEQPKDEPM-ESREEGEDEIVREIDVYLTPSIDPNTKLYVLQYPLRPLWRPYE 140

Query: 728 FRDKCQEVRVNPKEGMLEVDLSVDTGS-NYDHDAPDRLQIEKQTLFSQ-RVPLETSYAVG 555
             D+C+EVRV  K   +EVDL+VD  S NYD DA  R+ + KQTL S  + P+   YAVG
Sbjct: 141 LDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQTLTSSWKPPVTAGYAVG 200

Query: 554 VLAGSKLVLNPVDAVMQLRPSMAHLAPQGLKRSNAA----EEINGGKD--SGSAKKQGKA 393
           VL G+KL LNP+ AV+QLRPSM H  P+  KR   A    E+   G++  +GS KKQGK 
Sbjct: 201 VLVGNKLHLNPIHAVVQLRPSMQHYKPESSKRRTTASSNLEDNTKGEEVTTGSLKKQGK- 259

Query: 392 KTVKDAAAAGXXXXXXXXXXXXSWISLDYHGMDSLVSSRYQKKMTSQESSEIQFSMNPSE 213
                                  WI L+YHG  S +S  Y +KM   +SS IQFSMN  +
Sbjct: 260 --------PSGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMN-HD 310

Query: 212 YIKSLCPASAGVQNEEGSGSIRSLLSMPLEARLKKWLFEGPQLKRFSAAKHLAPNESNAT 33
           Y+ +LCP ++  +N   +G  R LLS+PLE R + WL +GP + RF A KHLAP+ S   
Sbjct: 311 YVNTLCPGTSN-ENNGSNGPSRVLLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVED 369

Query: 32  VLEILQQHA 6
           +L +L QHA
Sbjct: 370 ILAVLSQHA 378


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  250 bits (639), Expect = 4e-64
 Identities = 165/375 (44%), Positives = 213/375 (56%), Gaps = 37/375 (9%)
 Frame = -2

Query: 1019 APVNRPP---PRSSKFLPKLVPKQEPQPNLPKPSK-------NPQQQD------------ 906
            APV RP    P+SSK  PKL+PK EP    P+PSK       N +++D            
Sbjct: 12   APVRRPSRFAPKSSK--PKLIPKPEPSSQ-PEPSKLDDVTLINKKEEDSQPPLVKKADEP 68

Query: 905  ---------LPMEDHQEPPIPEPMLDDEQDQEDPVVREIDVFFTPR-LDAGAGLYVLQCP 756
                     + ME   +  + + M +D++D EDPVVREIDVFFTP   D    +YVLQ P
Sbjct: 69   FASSTQNGVIEMEVEAKAEVEDAMEEDDRD-EDPVVREIDVFFTPPPTDDNTKIYVLQYP 127

Query: 755  LRPLWRPYEFRDKCQEVRVNPKEGMLEVDLSVDTGS-NYDHDAPDRLQIEKQTL-FSQRV 582
            LRP WRPYE  ++C EVRV P    +EVDLS+D  S NYD DAP+  +++KQTL  S + 
Sbjct: 128  LRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQTLSTSWKP 187

Query: 581  PLETSYAVGVLAGSKLVLNPVDAVMQLRPSMAHLAPQGLKRSNAAEEINGGKDSGSAKKQ 402
            P  T Y VGVL G+KL LNP+ AV+QLRPSM +L+  G KR N     N   D+ SA K 
Sbjct: 188  PQTTGYVVGVLMGNKLHLNPIHAVVQLRPSMEYLSSGGAKRKN-----NVTGDTNSAVKL 242

Query: 401  GKAKTVKDAAAAGXXXXXXXXXXXXSWISLDYHGMDSLVSSRYQKKMTSQESSEIQFSMN 222
              +   +   +              SW+ L YH  +S  S+RY +KM ++++S IQF M+
Sbjct: 243  EVSNEEESVGS----------LKKQSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMS 292

Query: 221  PSEYIKSLCPASAGVQNEEGSG---SIRSLLSMPLEARLKKWLFEGPQLKRFSAAKHLAP 51
            P EY+ SLCP   GV N++      S R LLSMPLE R K  L EGP + RFSA KH AP
Sbjct: 293  PYEYVNSLCP--PGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAP 350

Query: 50   NESNATVLEILQQHA 6
            + S   VL +L +HA
Sbjct: 351  DNSVEDVLGVLTKHA 365


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  250 bits (639), Expect = 4e-64
 Identities = 149/378 (39%), Positives = 209/378 (55%), Gaps = 48/378 (12%)
 Frame = -2

Query: 998  PRSSKFLP--KLVPKQEPQPNLPKPSKNPQQ-QDLPM----EDHQEPPIPEPML------ 858
            P+S+KF P  K  P  +P P LP  +   Q+ Q+ P+    ED +E  I   ++      
Sbjct: 22   PKSAKFKPQPKTKPNPKPDPQLPSSNSELQEPQNAPLSKKNEDDEEEEIKPKIISTPKNE 81

Query: 857  --------------------------DDEQDQEDPVVREIDVFFTPRLDAGAGLYVLQCP 756
                                      ++E+++ED +VREIDVFFTP +D+   LYV+Q P
Sbjct: 82   AWLSNNGAVKMEIDDSMDEDKREEGENEEEEEEDMIVREIDVFFTPSIDSATQLYVMQYP 141

Query: 755  LRPLWRPYEFRDKCQEVRVNPKEGMLEVDLSVDTGSNYDHDAPDRLQIEKQTLFSQRVPL 576
            LRP WRPYE  ++C+EVRV P+   +EVDL++D  SN+D     +   +KQTL +  +P 
Sbjct: 142  LRPCWRPYELDERCEEVRVKPQSTEVEVDLTIDDSSNWDPAQASKYNFKKQTLSTSFMPP 201

Query: 575  E-TSYAVGVLAGSKLVLNPVDAVMQLRPSMAHLAPQGLKRSNAA--------EEINGGKD 423
              T YAVGVL G+KL LNP+ AV+QLRPS+ H+     KR N+A        E+ N GK 
Sbjct: 202  RVTGYAVGVLIGNKLHLNPIHAVVQLRPSLEHVNSNDSKRKNSATLNPEVKLEDSNEGKP 261

Query: 422  SGSAKKQGKAKTVKDAAAAGXXXXXXXXXXXXSWISLDYHGMDSLVSSRYQKKMTSQESS 243
             GS+KKQ                          WISL YHG  S  SSRY +KM +QESS
Sbjct: 262  IGSSKKQ-------------------------CWISLKYHGSKSDFSSRYLEKMIAQESS 296

Query: 242  EIQFSMNPSEYIKSLCPASAGVQNEEGSGSIRSLLSMPLEARLKKWLFEGPQLKRFSAAK 63
             ++F+M P +Y+ SLCP ++  + +      R LLS+PL  RLKK + EGP ++RFS  K
Sbjct: 297  PMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRFLLSLPLAERLKKLILEGPPVQRFSVLK 356

Query: 62   HLAPNESNATVLEILQQH 9
            H AP++S   VL++LQ++
Sbjct: 357  HFAPDDSVEDVLKVLQEY 374


>ref|XP_002310208.1| predicted protein [Populus trichocarpa] gi|222853111|gb|EEE90658.1|
            predicted protein [Populus trichocarpa]
          Length = 667

 Score =  248 bits (633), Expect = 2e-63
 Identities = 151/374 (40%), Positives = 206/374 (55%), Gaps = 38/374 (10%)
 Frame = -2

Query: 1016 PVNRPPPRSSKFLPKLVPKQEPQPN-----LPKP-------------------------- 930
            P +R  P S K  PK  PK +P+P       PKP                          
Sbjct: 15   PPSRFAPTSKKPQPKSKPKPKPEPQESVPVAPKPDPSVSNTAEDAKPKIDDTLSKTETGV 74

Query: 929  SKNPQQQDLPMEDHQEPPIPEPML---DDEQDQEDPVVREIDVFFTPRLDAGAGLYVLQC 759
            S    + ++  ++ +   + E  L   D E+D++D VVREIDV++TP +D    LYV+Q 
Sbjct: 75   SNGNVKMEIDAKEERGAAVKENDLMDVDKEEDEDDVVVREIDVYYTPSVDPNTQLYVMQY 134

Query: 758  PLRPLWRPYEFRDKCQEVRVNPKEGMLEVDLSVDTGSNYDHDAPDRLQIEKQTLFSQ-RV 582
            PLRP WRPYE  ++C+EVRV P+   +EVDLS+D   NYD D   RL ++KQTL S    
Sbjct: 135  PLRPCWRPYELDERCKEVRVKPESTEVEVDLSIDDTKNYDPDIASRLNMKKQTLSSSWSP 194

Query: 581  PLETSYAVGVLAGSKLVLNPVDAVMQLRPSMAHLA---PQGLKRSNAAEEINGGKDSGSA 411
            P  T YAVGVL G+KL LNP+ AV+QLRPSM +L+    +G K + + E+ N GK  G  
Sbjct: 195  PPATGYAVGVLIGNKLHLNPIHAVVQLRPSMDYLSSGNSKGKKNATSGEDSNEGKPLGLP 254

Query: 410  KKQGKAKTVKDAAAAGXXXXXXXXXXXXSWISLDYHGMDSLVSSRYQKKMTSQESSEIQF 231
            KKQ K  +                    SWI L YHG  S +SSRY + M + ESS I+F
Sbjct: 255  KKQSKQMS---------SGNEQKPDVEESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEF 305

Query: 230  SMNPSEYIKSLCPASAGVQNEEGSGSIRSLLSMPLEARLKKWLFEGPQLKRFSAAKHLAP 51
            +MNP +Y+ SLCP  +    +    S R LLS+PLE R+K+   EGP + RF+A +HL P
Sbjct: 306  AMNPYDYMSSLCPGISNNNIKLNGPSRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIP 365

Query: 50   NESNATVLEILQQH 9
            N+S   +L +LQ++
Sbjct: 366  NDSIEDLLIVLQEY 379