BLASTX nr result

ID: Aconitum21_contig00019320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019320
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ...   117   2e-24
emb|CBI33150.3| unnamed protein product [Vitis vinifera]              117   2e-24
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h...   100   3e-19
ref|NP_567206.1| zinc finger-related and helicase and IBR domain...    85   1e-14
emb|CAB45785.1| putative protein [Arabidopsis thaliana] gi|72675...    85   1e-14

>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Vitis vinifera]
          Length = 1686

 Score =  117 bits (294), Expect = 2e-24
 Identities = 71/187 (37%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
 Frame = +3

Query: 81  PPTMKSFNSTPNPRGASFPASSHSSRTLTPSLPTAYMNNCYKGR----SPPQSSFPQNFI 248
           P T +      NPR A  P +  S R         + +NC +      +PP    P NFI
Sbjct: 7   PATYRRHGPPANPRRAFSPGNIRSVRPQFEERGDEFPSNCRQNLRPEVAPPFHPSPPNFI 66

Query: 249 IQLRPSLRSSGSPNFSRDQICQLVDRVRPAPALKFLFPSQFIAATLQYPQWRDTLEALVY 428
           I+LRP L       F +  + +L+   +  P    +  S  IAATL + QW DTLE +VY
Sbjct: 67  IELRPGLGG-----FKKIDVDELLATCKLMPEKVTVLSSGPIAATLFFRQWVDTLETMVY 121

Query: 429 LWDQRLKGCHLLYPYLISNVTVPSDKDELRGCLKTLFETHVNGLLEGEFVEKWVKKAGDC 608
           LW+ RL+G HL  P LI N+ +PSD+DELR  L+T F  H+  +LEGE V+KW  +    
Sbjct: 122 LWELRLEGKHLFTPKLIRNIIMPSDEDELRSRLQTTFGNHIRAILEGEEVKKWQNELQHL 181

Query: 609 SAEIVGI 629
           S EI  +
Sbjct: 182 SDEIAKV 188


>emb|CBI33150.3| unnamed protein product [Vitis vinifera]
          Length = 1988

 Score =  117 bits (294), Expect = 2e-24
 Identities = 71/187 (37%), Positives = 97/187 (51%), Gaps = 4/187 (2%)
 Frame = +3

Query: 81  PPTMKSFNSTPNPRGASFPASSHSSRTLTPSLPTAYMNNCYKGR----SPPQSSFPQNFI 248
           P T +      NPR A  P +  S R         + +NC +      +PP    P NFI
Sbjct: 7   PATYRRHGPPANPRRAFSPGNIRSVRPQFEERGDEFPSNCRQNLRPEVAPPFHPSPPNFI 66

Query: 249 IQLRPSLRSSGSPNFSRDQICQLVDRVRPAPALKFLFPSQFIAATLQYPQWRDTLEALVY 428
           I+LRP L       F +  + +L+   +  P    +  S  IAATL + QW DTLE +VY
Sbjct: 67  IELRPGLGG-----FKKIDVDELLATCKLMPEKVTVLSSGPIAATLFFRQWVDTLETMVY 121

Query: 429 LWDQRLKGCHLLYPYLISNVTVPSDKDELRGCLKTLFETHVNGLLEGEFVEKWVKKAGDC 608
           LW+ RL+G HL  P LI N+ +PSD+DELR  L+T F  H+  +LEGE V+KW  +    
Sbjct: 122 LWELRLEGKHLFTPKLIRNIIMPSDEDELRSRLQTTFGNHIRAILEGEEVKKWQNELQHL 181

Query: 609 SAEIVGI 629
           S EI  +
Sbjct: 182 SDEIAKV 188


>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
           [Medicago truncatula] gi|355490965|gb|AES72168.1|
           Pre-mRNA splicing factor ATP-dependent RNA helicase-like
           protein [Medicago truncatula]
          Length = 1718

 Score =  100 bits (249), Expect = 3e-19
 Identities = 54/137 (39%), Positives = 80/137 (58%)
 Frame = +3

Query: 210 RSPPQSSFPQNFIIQLRPSLRSSGSPNFSRDQICQLVDRVRPAPALKFLFPSQFIAATLQ 389
           R+PP    P NFI++L    R+      +RD +  L+ + +P P     +P   +AA+L 
Sbjct: 44  RNPPHR--PPNFILKLHLGRRA-----LNRDDVDSLIGKCKPNPDNYCFYPCDGVAASLN 96

Query: 390 YPQWRDTLEALVYLWDQRLKGCHLLYPYLISNVTVPSDKDELRGCLKTLFETHVNGLLEG 569
           + QW D  +A+V+ W+ R+ G H   P LISNV VPSD  EL G L+ +F +HV  L+EG
Sbjct: 97  FLQWTDARDAVVWFWESRISGGHDFTPELISNVMVPSDTVELEGSLRRVFASHVKELMEG 156

Query: 570 EFVEKWVKKAGDCSAEI 620
           + V+KWV++    S EI
Sbjct: 157 KEVKKWVEEWDRVSKEI 173


>ref|NP_567206.1| zinc finger-related and helicase and IBR domain-containing protein
           [Arabidopsis thaliana]
           gi|290463373|sp|P0CE10.1|Y4102_ARATH RecName:
           Full=Putative uncharacterized protein At4g01020,
           chloroplastic; Flags: Precursor
           gi|332656567|gb|AEE81967.1| zinc finger-related and
           helicase and IBR domain-containing protein [Arabidopsis
           thaliana]
          Length = 1787

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 72/218 (33%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
 Frame = +3

Query: 84  PTMKSFNSTPNPRGASFPASS---HSSRTLTPSLP-----------TAYMNNCY------ 203
           P      ST + R  SFP+SS   ++SR+   S P           + Y N  +      
Sbjct: 6   PPSDGGRSTTDRRQQSFPSSSTNRYNSRSAQSSPPLNHCTTWNQQHSQYHNTNFPPNYRR 65

Query: 204 -----KGRSPPQSSFPQNFIIQLRPSLRSSGSPNFSRDQICQLVDRVRPAPALKFLFPSQ 368
                 G SPP +    NFI+QL     ++     S+ Q  + +  +   P      P Q
Sbjct: 66  DRAPSSGFSPPVTRARPNFIVQLLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVP-Q 124

Query: 369 F--IAATLQYPQWRDTLEALVYLWDQRLKGCHLLYPYLISNVTVPSDKDELRGCLKTLFE 542
           F  IAA+  + QW D   A+V LWD RL+G H   P LI NV VPSD DEL+  L+ LF 
Sbjct: 125 FGCIAASFSFRQWVDARSAVVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFS 184

Query: 543 THVNGLLE-GEFVEKWVKKAGDCSAEIVGIDKNLSRRG 653
           +HV  L+E G+ V+K   +  D S ++       S+RG
Sbjct: 185 SHVLSLMENGQGVKKVRMEIDDKSRQVASFS---SKRG 219


>emb|CAB45785.1| putative protein [Arabidopsis thaliana] gi|7267599|emb|CAB80911.1|
           putative protein [Arabidopsis thaliana]
          Length = 2322

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 72/218 (33%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
 Frame = +3

Query: 84  PTMKSFNSTPNPRGASFPASS---HSSRTLTPSLP-----------TAYMNNCY------ 203
           P      ST + R  SFP+SS   ++SR+   S P           + Y N  +      
Sbjct: 6   PPSDGGRSTTDRRQQSFPSSSTNRYNSRSAQSSPPLNHCTTWNQQHSQYHNTNFPPNYRR 65

Query: 204 -----KGRSPPQSSFPQNFIIQLRPSLRSSGSPNFSRDQICQLVDRVRPAPALKFLFPSQ 368
                 G SPP +    NFI+QL     ++     S+ Q  + +  +   P      P Q
Sbjct: 66  DRAPSSGFSPPVTRARPNFIVQLLHPAAANSDTKLSKKQEIESIALLCEIPEESVHVP-Q 124

Query: 369 F--IAATLQYPQWRDTLEALVYLWDQRLKGCHLLYPYLISNVTVPSDKDELRGCLKTLFE 542
           F  IAA+  + QW D   A+V LWD RL+G H   P LI NV VPSD DEL+  L+ LF 
Sbjct: 125 FGCIAASFSFRQWVDARSAVVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRDLFS 184

Query: 543 THVNGLLE-GEFVEKWVKKAGDCSAEIVGIDKNLSRRG 653
           +HV  L+E G+ V+K   +  D S ++       S+RG
Sbjct: 185 SHVLSLMENGQGVKKVRMEIDDKSRQVASFS---SKRG 219


Top