BLASTX nr result
ID: Aconitum21_contig00019283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00019283
(1726 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50966.1| T4.5 [Malus x robusta] 322 2e-85
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 287 5e-75
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 287 5e-75
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 261 4e-67
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 260 9e-67
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 322 bits (825), Expect = 2e-85
Identities = 182/446 (40%), Positives = 265/446 (59%), Gaps = 34/446 (7%)
Frame = +2
Query: 404 MGSIIPTKLSSGNYLTWKSLFLPVLRKYKVLGLVDGSSKCPEKYVISSTGVVTDQINPAY 583
+ ++PTKL+ NY+TW+SLF+PVL+++K++GLV+G CP +V +G N ++
Sbjct: 270 VAGMVPTKLNRQNYITWRSLFIPVLKRFKLIGLVNGEDLCPPPFVRDPSGTCVP--NASF 327
Query: 584 SSWIDLDQTLLIWINSTISDSLLPYVVGASTSREIWLTLEKRFSFLSTSHVIQLQTDLVN 763
+W + DQ L+IWINST+S LLP +G SR +W +LE+RFS S +HV L++ +
Sbjct: 328 ETWCERDQILMIWINSTLSKDLLPLTIGMEDSRSLWQSLERRFSGASRTHVHSLRSKIQT 387
Query: 764 AKKGTSSISTYLQQIKEISDRLAASGSPAADRDLVVHILNGLPPEYESFVTGIKLRNPPV 943
KG SS++ +L IKEIS++LAA+G P ++ DLV +IL+GLP EYESFV I+ RN V
Sbjct: 388 IHKGDSSMTDFLNSIKEISNKLAAAGEPLSESDLVAYILSGLPDEYESFVDSIETRNESV 447
Query: 944 TNDELHGLVISHELTLNRNFS--ASSGEPQNHAYASFQTKNSSKSNGSQYNRGKGRGKGY 1117
T DELHGL++S E++L + + +SS HAYA+ S ++ +N+G RG+ +
Sbjct: 448 TADELHGLLLSKEISLQKRKTRASSSSNAPFHAYAA-----QSSTHVGHFNKGNSRGRFH 502
Query: 1118 -QNHHTQFSSSGSQNRP-------------------------------TCQICGKLVHLA 1201
+N +TQ + G N+P CQ+C + H A
Sbjct: 503 NRNRYTQNRNFGG-NKPHNWHANNSGGILGAGPSRQPAGPSSSSGCSVQCQLCLQYGHWA 561
Query: 1202 IDCYNRLNLSFIGKTPPARLQAMIAGTSYSPDYWYADSGATNHITADLQNLDMQNEYNGA 1381
C NRL+ F P + AM + S SP YW DSGA++H+T D L+ Y+G
Sbjct: 562 PMC-NRLS-QFAQSQSPTAMSAMTS--SASPSYWLTDSGASHHVTPDPSALNSAIPYSGN 617
Query: 1382 EKVQIGNGQGLSILHTGSTLYSTANQTFRLNNILHVPSISQNLLSVHQFATDNDCALIFT 1561
+++ +G+G+GL I HTGS L T + TFRLN++L VP S NLLSV++F DN C L F
Sbjct: 618 DQLFVGDGKGLCISHTGSALIRTKHATFRLNDVLLVPQASHNLLSVYKFVYDNWCYLTFD 677
Query: 1562 STCVTMKDRRSGKILFQEPTRNGLYP 1639
+KD +GK+LFQ P+ GLYP
Sbjct: 678 PFGFYVKDLSTGKMLFQGPSEGGLYP 703
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 287 bits (735), Expect = 5e-75
Identities = 169/485 (34%), Positives = 259/485 (53%), Gaps = 39/485 (8%)
Frame = +2
Query: 374 STSSLPDPHKMGSIIPTKLSSGNYLTWKSLFLPVLRKYKVLGLVDGSSKCPEKYVISSTG 553
S+SS + + + + KL NY W + P+L+ K+ G VDG++ CP ++ G
Sbjct: 3 SSSSTENTPSVSNFLTIKLDRTNYPLWLAQITPILKSRKLWGFVDGTNLCPPCFLKDKAG 62
Query: 554 VVTDQINPAYSSWIDLDQTLLIWINSTISDSLLPYVVGASTSREIWLTLEKRFSFLSTSH 733
+TDQ+NP + WI DQ +L WIN +++ +L V +++ W L RF+ S
Sbjct: 63 QLTDQVNPDFEPWILQDQMVLSWINGSLTPKVLSTVARSTSLHATWTALATRFASQSQHR 122
Query: 734 VIQLQTDLVNAKKGTSSISTYLQQIKEISDRLAASGSPAADRDLVVHILNGLPPEYESFV 913
V+QL+ DL+ +GT SIS YL ++ I+D LA +GSP D DLV ++ + P YE+ V
Sbjct: 123 VLQLRADLLRTTRGTMSISDYLDKLNSIADNLALAGSPVPDADLVNIVMTNVGPLYETTV 182
Query: 914 TGIKLRNPPVTNDELHGLVISHELTLNRNFSASSGEPQNHAYA---------SFQTKNSS 1066
+ + R+ P+T + L L++S E ++ ++ E + +A SF +
Sbjct: 183 SSAQARDSPITYEALEVLLLSAERRVSEYAHPAAAEGIHALHATQSRGRGRNSFISGRGG 242
Query: 1067 KSNGSQYNRG-------KGRGKGYQNHHTQFSSSGSQN---------------------- 1159
+ G Y+ G RG+G +H SSGS+
Sbjct: 243 SNRGGSYSHGITNSGSAHSRGRGTFSHSR--GSSGSRRSSILGPAPGTTTSNGNSFFNTG 300
Query: 1160 RPTCQICGKLVHLAIDCYNRLNLSFIGKTPPARLQAMIAGTSYSPDYWYADSGATNHITA 1339
R CQIC + H AIDC+NRLNLS+ G+ P +RL AM A S S + W D+GA +H+T
Sbjct: 301 RIQCQICSRPGHSAIDCFNRLNLSYEGRVPSSRLNAMTAHHSPSEETWLTDTGANSHVTP 360
Query: 1340 DLQNLDMQNEYNGAEKVQ-IGNGQGLSILHTGSTLYSTANQTFRLNNILHVPSISQNLLS 1516
+L N+D Y G + + I + GLSI H GS+ ++++ +F LN+ILH PS S NLLS
Sbjct: 361 NLGNIDSPKSYKGLDNLGGINSDSGLSIKHIGSSKLNSSSSSFHLNDILHCPSASTNLLS 420
Query: 1517 VHQFATDNDCALIFTSTCVTMKDRRSGKILFQEPTRNGLYPIRFTPTAASAHFSSPSAKT 1696
V++F DN C IF +KD ++GK+L+ + NGLYP RF P+ S SS + +
Sbjct: 421 VYKFTIDNHCYFIFYPNYFCVKDLKTGKMLYHGKSENGLYPFRF-PSKTSKVSSSLAYVS 479
Query: 1697 TQFSA 1711
++ SA
Sbjct: 480 SRVSA 484
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 287 bits (735), Expect = 5e-75
Identities = 161/422 (38%), Positives = 240/422 (56%), Gaps = 11/422 (2%)
Frame = +2
Query: 410 SIIPTKLS-SGNYLTWKSLFLPVLRKYKVLGLVDGSSKCPEKYVISSTGVVTDQINPAYS 586
+II KL S NYL WK FL +LR + ++G +DG+ CP K+ S + +NPAY
Sbjct: 19 TIISVKLDGSHNYLAWKMQFLNLLRGHDLMGFIDGTEACPPKHTASGS------LNPAYV 72
Query: 587 SWIDLDQTLLIWINSTISDSLLPYVVGASTSREIWLTLEKRFSFLSTSHVIQLQTDLVNA 766
W D LL WI +++S+ L+ + G TS+++W L+ RFS S S + L+ L
Sbjct: 73 VWQKKDVCLLGWILASLSEKLVSTIYGLETSKQVWTALQTRFSSQSRSRISHLKRQLQTL 132
Query: 767 KKGTSSISTYLQQIKEISDRLAASGSPAADRDLVVHILNGLPPEYESFVTGIKL--RNPP 940
+GT S S YL+ K ++D+LAA+G P D+DL+ +L GL Y FVT R
Sbjct: 133 TQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLISFLLGGLQSSYTPFVTSFNFASRETD 192
Query: 941 VTNDELHGLVISHELTLNRNFSASSGEPQNHAYASFQTKNSS--KSNGSQYNRGKGRGKG 1114
T ++ ++ +E L+ N S + + + A+A+ ++K + + G K +
Sbjct: 193 FTFEDFQAELLGYENLLDVNHSVHNTDGPHFAFAANKSKAPTYVQKKGPPLPPTKMQNAA 252
Query: 1115 YQNHHTQFS-SSGSQ---NRPTCQICGKLVHLAIDCYNRLNLSFIGKTPPARLQAMIAGT 1282
N+ +Q + S+ SQ NRP CQICGK H AIDC++R + S+ G+ PP L AM+A T
Sbjct: 253 SSNYRSQQTRSTPSQLPNNRPVCQICGKSGHTAIDCFHRFDYSYQGRFPPQDLAAMVAET 312
Query: 1283 SYSPDY--WYADSGATNHITADLQNLDMQNEYNGAEKVQIGNGQGLSILHTGSTLYSTAN 1456
+ + D+ WY DSGA HIT+D NL Q + +E V +GNG GL +L+TGST ++
Sbjct: 313 NATFDHQVWYMDSGANAHITSDATNLTHQQPFCESETVTVGNGSGLQVLNTGSTTFNFGQ 372
Query: 1457 QTFRLNNILHVPSISQNLLSVHQFATDNDCALIFTSTCVTMKDRRSGKILFQEPTRNGLY 1636
F LN ILH P + NL+S++QF DN+C I T+ +K+ +G+IL Q NGLY
Sbjct: 373 SNFHLNKILHCPQAATNLISINQFCLDNNCYFILTANGFVVKENLTGRILLQGVVENGLY 432
Query: 1637 PI 1642
P+
Sbjct: 433 PL 434
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 261 bits (667), Expect = 4e-67
Identities = 157/476 (32%), Positives = 260/476 (54%), Gaps = 28/476 (5%)
Frame = +2
Query: 368 ANSTSSLPDPHKMGSIIPTKLSSGNYLTWKSLFLPVLRKYKVLGLVDGSSKCPEKYVISS 547
+++ +S+P + +P KL NY+ W+S V+ +DG+S CPEK + S
Sbjct: 20 SSTMASIPSYQMLNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDL--S 77
Query: 548 TGVVTDQINPAYSSWIDLDQTLLIWINSTISDSLLPYVVGASTSREIWLTLEKRFSFLST 727
GV+ NPA+ +W D+T+L WI S+++ ++ ++G +TS W LE FS S
Sbjct: 78 PGVM----NPAFVAWRRQDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSR 133
Query: 728 SHVIQLQTDLVNAKKGTSSISTYLQQIKEISDRLAASGSPAADRDLVVHILNGLPPEYES 907
+ ++QL+ +L + KKG+ S+ Y+ +IK +D LAA G P +++D V+++L GL +Y +
Sbjct: 134 ARIMQLRLELQSTKKGSMSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYNA 193
Query: 908 FVTGIKLRNPPVTNDELHGLVISHELTLNRNFSASSGEPQNHAYASFQTKNSSKSNGSQY 1087
VT I +R+ ++ + +H ++++ E L + SS E + YAS ++++ G ++
Sbjct: 194 VVTAINIRDDKISLEAIHSMLLAFEHRLEQQ---SSIEQMSANYAS---SSNNRGGGRKF 247
Query: 1088 NRG--------------KGRGKGYQNHHTQFSSSGSQNRPTCQICGKLVHLAIDCYNRLN 1225
N G +GRG+G +N +S +P CQ+CGK H A CY+R +
Sbjct: 248 NGGRGQGYSPNNNNYTYRGRGRGGRNGQGGRQNSSPSEKPQCQLCGKFGHTAQICYHRFD 307
Query: 1226 LSFIGKTPPA----------RLQAMIAGTSYSP--DYWYADSGATNHITADLQNLDMQNE 1369
+SF G + AM+A S +P + WY DSGA++H+T +L NL +
Sbjct: 308 ISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADESWYLDSGASHHLTQNLGNLTSTSP 367
Query: 1370 YNGAEKVQIGNGQGLSILHTGSTLYSTANQTFRLNNILHVPSISQNLLSVHQFATDNDCA 1549
Y G +KV IGNG+ LSI + GS + +FRL + HVP IS NL+SV +F ++N+
Sbjct: 368 YTGTDKVTIGNGKHLSISNIGSKQLHSHTHSFRLKKVFHVPFISANLISVAKFCSENNAL 427
Query: 1550 LIFTSTCVTMKDRRSGKILFQEPTRNGLY--PIRFTPTAASAHFSSPSAKTTQFSA 1711
+ F S +KD + +L Q NGLY P+ F+ + ++ SA +QFS+
Sbjct: 428 IEFHSNAFFVKDLHTKMVLAQGKLENGLYKFPV-FSNLKPYSSINNASAFHSQFSS 482
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 260 bits (664), Expect = 9e-67
Identities = 145/452 (32%), Positives = 246/452 (54%), Gaps = 13/452 (2%)
Frame = +2
Query: 365 MANSTSSLPDPHKMGSIIPTKLSSGNYLTWKSLFLPVLRKYKVLGLVDGSSKCPEKYVIS 544
M +S S+ P + KL+ GNYL WK+ LP +R ++ ++ G CP K +
Sbjct: 3 MQSSLSTSAIPTSFAIPVSEKLTKGNYLLWKAQVLPAIRAAQLDDILTGVEICPPKTISD 62
Query: 545 STGVVTDQINPAYSSWIDLDQTLLIWINSTISDSLLPYVVGASTSREIWLTLEKRFSFLS 724
++ NPAY WI DQ +L ++ S++S +L VV STS +W TL + +S S
Sbjct: 63 ASDRTVTVANPAYGRWIARDQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHS 122
Query: 725 TSHVIQLQTDLVNAKKGTSSISTYLQQIKEISDRLAASGSPAADRDLVVHILNGLPPEYE 904
+ + + L KKG SS++ Y +++ +D L A+G P D + V +L GL ++
Sbjct: 123 RARKVNTRIALATTKKGASSVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDEDFN 182
Query: 905 SFVTGIKLRNPPVTNDELHGLVISHELTLNRNFSASSGEPQNHAYASFQTKNSS--KSNG 1078
VT + R+ P+T +L+ ++S+E ++ + SS Q+ A A + S +S G
Sbjct: 183 PLVTAVVARSDPITPGDLYTQLLSYENRMHLQ-TGSSSLMQSSANARSPGRGMSWGRSGG 241
Query: 1079 SQYNRGKGRGKGYQ----------NHHTQFSSSGSQNRPTCQICGKLVHLAIDCYNRLNL 1228
++RG+GRG+G N+++ + + + +RP CQ+C ++ H A++C+ R +
Sbjct: 242 RGFSRGRGRGRGPSRGGFQSFGRGNNYSGATDADTSSRPRCQVCSRVGHTALNCWYRFDE 301
Query: 1229 SFIGKTPPARLQAMIAGTSYSPDYWYADSGATNHITADLQNLDMQNEYNGAEKVQIGNGQ 1408
+++ P R A + S WY D+GAT+HIT DL L M ++Y G +++ NG
Sbjct: 302 NYV---PDQRSANSAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGT 358
Query: 1409 GLSILHTGSTLYSTANQTFRLNNILHVPSISQNLLSVHQFATDNDCALIFTSTCVTMKDR 1588
G++I + G+ + T++++ L ++LHVPS +NL+SVH+ DND + F S+ +KDR
Sbjct: 359 GMTISNIGNAIVPTSSRSLHLRSVLHVPSTHKNLISVHRLTNDNDVFIEFHSSHFLIKDR 418
Query: 1589 RSGKILFQEPTRNGLYPIRFTPTAASAH-FSS 1681
++ +L R+GLYP+ P H FSS
Sbjct: 419 QTKAVLLHGKCRDGLYPLPPHPDLRLKHNFSS 450