BLASTX nr result

ID: Aconitum21_contig00019151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019151
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   140   1e-31
ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|2...   137   1e-30
emb|CBI36234.3| unnamed protein product [Vitis vinifera]              134   7e-30

>ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  145 bits (366), Expect = 4e-33
 Identities = 66/85 (77%), Positives = 72/85 (84%)
 Frame = -2

Query: 546  DKAETSKEDIFCGHSERLAIGLGLISTLPGMPIRVTKNLYMCGSCHTIVKFISKVVRREI 367
            D  + SK +IFCGHSERLAI  GLI+T+PG PI VTKNLYMC +CH  VKFISKVVRR I
Sbjct: 786  DDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGI 845

Query: 366  TVRDTEQFHHFKDGVCSCGDVGYWG 292
            +VRDTEQFHHFKDGVCSCGD GYWG
Sbjct: 846  SVRDTEQFHHFKDGVCSCGDEGYWG 870


>ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
            chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  142 bits (359), Expect = 3e-32
 Identities = 63/82 (76%), Positives = 71/82 (86%)
 Frame = -2

Query: 537  ETSKEDIFCGHSERLAIGLGLISTLPGMPIRVTKNLYMCGSCHTIVKFISKVVRREITVR 358
            E+S+ DIFCGHSER AI  GLI+T PGMPI VTKNLYMC SCH +VKFIS +VRREI+VR
Sbjct: 792  ESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVRREISVR 851

Query: 357  DTEQFHHFKDGVCSCGDVGYWG 292
            D E++HHFKDGVCSCGD GYWG
Sbjct: 852  DVEEYHHFKDGVCSCGDEGYWG 873


>ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  140 bits (353), Expect = 1e-31
 Identities = 62/82 (75%), Positives = 70/82 (85%)
 Frame = -2

Query: 537  ETSKEDIFCGHSERLAIGLGLISTLPGMPIRVTKNLYMCGSCHTIVKFISKVVRREITVR 358
            E+S+ DIFCGHSER AI  GLI+T PGMPI V KNLYMC SCH +VKFIS +VRREI+VR
Sbjct: 792  ESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVRREISVR 851

Query: 357  DTEQFHHFKDGVCSCGDVGYWG 292
            D E++HHFKDGVCSCGD GYWG
Sbjct: 852  DVEEYHHFKDGVCSCGDEGYWG 873


>ref|XP_002303270.1| predicted protein [Populus trichocarpa] gi|222840702|gb|EEE78249.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/82 (76%), Positives = 71/82 (86%)
 Frame = -2

Query: 552 SVDKAETSKEDIFCGHSERLAIGLGLISTLPGMPIRVTKNLYMCGSCHTIVKFISKVVRR 373
           S+D  +TSK DIFCGHSER AI   LI++ PGMPI VTKNLYMC SCH+ VKFISK+VRR
Sbjct: 724 SMDGIQTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQSCHSTVKFISKIVRR 783

Query: 372 EITVRDTEQFHHFKDGVCSCGD 307
           EI+VRDTEQFHHFKDG+CSCGD
Sbjct: 784 EISVRDTEQFHHFKDGLCSCGD 805


>emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  134 bits (338), Expect = 7e-30
 Identities = 62/80 (77%), Positives = 68/80 (85%)
 Frame = -2

Query: 546  DKAETSKEDIFCGHSERLAIGLGLISTLPGMPIRVTKNLYMCGSCHTIVKFISKVVRREI 367
            D  + SK +IFCGHSERLAI  GLI+T+PG PI VTKNLYMC +CH  VKFISKVVRR I
Sbjct: 786  DDIDASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISKVVRRGI 845

Query: 366  TVRDTEQFHHFKDGVCSCGD 307
            +VRDTEQFHHFKDGVCSCGD
Sbjct: 846  SVRDTEQFHHFKDGVCSCGD 865


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