BLASTX nr result

ID: Aconitum21_contig00019135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00019135
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containi...   175   5e-42
ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   174   6e-42
emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]   172   2e-41
emb|CBI41008.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002518586.1| pentatricopeptide repeat-containing protein,...   157   1e-36

>ref|XP_002268636.2| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial [Vitis vinifera]
          Length = 383

 Score =  175 bits (443), Expect = 5e-42
 Identities = 91/185 (49%), Positives = 123/185 (66%)
 Frame = +1

Query: 1   MSSSTSRLYRIFTTNSKPSKPPPRNTSFNKKLTAXXXXXXXXXXXXXQTFNAAIQSLLEE 180
           MS  + RLYR F+T++  +     N                          +  + +  E
Sbjct: 1   MSFLSRRLYRAFSTSTAATAQATGN------------------------LESVFKDIYRE 36

Query: 181 KNLTQLVEKFKQSSECSRFRAKTGIYELIVRRLASAKKLQLVEQVLEHQKKYEDITKEGF 360
           +NL +LV+KFK+SSE  RFR KTGIYE  VRRLASAK+ + +E++LE QKKY+DI++EGF
Sbjct: 37  RNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGF 96

Query: 361 AVRLINLYGKVGMFEHAYKVFEEMPQLKCPRTVMSFSALLSACVQSKRFNQVEELFRRVP 540
           AVRLI+LYGK GMF+HA+KVF+EMP  KC R+V+SF+ALL ACV SK+F++VE  F  +P
Sbjct: 97  AVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDKVEGFFSELP 156

Query: 541 STLSI 555
           S LS+
Sbjct: 157 SKLSV 161


>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  174 bits (442), Expect = 6e-42
 Identities = 91/185 (49%), Positives = 122/185 (65%)
 Frame = +1

Query: 1   MSSSTSRLYRIFTTNSKPSKPPPRNTSFNKKLTAXXXXXXXXXXXXXQTFNAAIQSLLEE 180
           MS  + RLYR F+T++  +     N                          +  + +  E
Sbjct: 1   MSFLSRRLYRAFSTSTAATAQATGN------------------------LESVFKDIYRE 36

Query: 181 KNLTQLVEKFKQSSECSRFRAKTGIYELIVRRLASAKKLQLVEQVLEHQKKYEDITKEGF 360
           +NL +LV+KFK+SSE  RFR KTGIYE  VRRLASAK+ + +E++LE QKKY+DI++EGF
Sbjct: 37  RNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGF 96

Query: 361 AVRLINLYGKVGMFEHAYKVFEEMPQLKCPRTVMSFSALLSACVQSKRFNQVEELFRRVP 540
           AVRLI LYGK GMF+HA+KVF+EMP  KC R+V+SF+ALL ACV SK+F++VE  F  +P
Sbjct: 97  AVRLITLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVNSKKFDKVEGFFSELP 156

Query: 541 STLSI 555
           S LS+
Sbjct: 157 SKLSV 161


>emb|CAN76851.1| hypothetical protein VITISV_005999 [Vitis vinifera]
          Length = 383

 Score =  172 bits (437), Expect = 2e-41
 Identities = 90/185 (48%), Positives = 122/185 (65%)
 Frame = +1

Query: 1   MSSSTSRLYRIFTTNSKPSKPPPRNTSFNKKLTAXXXXXXXXXXXXXQTFNAAIQSLLEE 180
           MS  + RLYR F+T++  +     N                          +  + +  E
Sbjct: 1   MSFLSRRLYRAFSTSTAATAQATGN------------------------LESVFKDIYRE 36

Query: 181 KNLTQLVEKFKQSSECSRFRAKTGIYELIVRRLASAKKLQLVEQVLEHQKKYEDITKEGF 360
           +NL +LV+KFK+SSE  RFR KTGIYE  VRRLASAK+ + +E++LE QKKY+DI++EGF
Sbjct: 37  RNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKKYKDISREGF 96

Query: 361 AVRLINLYGKVGMFEHAYKVFEEMPQLKCPRTVMSFSALLSACVQSKRFNQVEELFRRVP 540
           AVRLI+LYGK GMF+HA+KVF+EMP  KC R+V+SF+ LL ACV SK+F++VE  F  +P
Sbjct: 97  AVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNXLLGACVXSKKFDKVEGFFSELP 156

Query: 541 STLSI 555
           S LS+
Sbjct: 157 SKLSV 161


>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
          Length = 379

 Score =  170 bits (431), Expect = 1e-40
 Identities = 78/134 (58%), Positives = 108/134 (80%)
 Frame = +1

Query: 154 AAIQSLLEEKNLTQLVEKFKQSSECSRFRAKTGIYELIVRRLASAKKLQLVEQVLEHQKK 333
           +  + +  E+NL +LV+KFK+SSE  RFR KTGIYE  VRRLASAK+ + +E++LE QKK
Sbjct: 36  SVFKDIYRERNLKRLVQKFKKSSELDRFRTKTGIYEETVRRLASAKRFRWIEEILEEQKK 95

Query: 334 YEDITKEGFAVRLINLYGKVGMFEHAYKVFEEMPQLKCPRTVMSFSALLSACVQSKRFNQ 513
           Y+DI++EGFAVRLI+LYGK GMF+HA+KVF+EMP  KC R+V+SF+ALL ACV SK+F++
Sbjct: 96  YKDISREGFAVRLISLYGKSGMFDHAFKVFDEMPDQKCERSVLSFNALLGACVHSKKFDK 155

Query: 514 VEELFRRVPSTLSI 555
           ++  F+ +P  L +
Sbjct: 156 IDGFFQELPGNLGV 169


>ref|XP_002518586.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542431|gb|EEF43973.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 377

 Score =  157 bits (397), Expect = 1e-36
 Identities = 76/134 (56%), Positives = 104/134 (77%)
 Frame = +1

Query: 154 AAIQSLLEEKNLTQLVEKFKQSSECSRFRAKTGIYELIVRRLASAKKLQLVEQVLEHQKK 333
           ++++ L +E+NL +LVEKFK+ SE  RFR KTGIYE  +RRLA AK+   +E++LE QKK
Sbjct: 27  SSVKVLYKERNLKRLVEKFKKFSENDRFRTKTGIYEETIRRLAIAKRFNWIEEILEDQKK 86

Query: 334 YEDITKEGFAVRLINLYGKVGMFEHAYKVFEEMPQLKCPRTVMSFSALLSACVQSKRFNQ 513
           Y+DI KEG+  RLI LYGK  MF+++ KVF+EMP   C RTV+SF+ALL+ACV SK+F++
Sbjct: 87  YKDIHKEGYNARLIRLYGKSNMFDNSRKVFDEMPDRNCKRTVVSFNALLAACVTSKKFDE 146

Query: 514 VEELFRRVPSTLSI 555
           V+ LFR++P  L I
Sbjct: 147 VDGLFRKLPKELEI 160


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