BLASTX nr result

ID: Aconitum21_contig00018812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00018812
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   149   3e-34
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   145   3e-33
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   143   1e-32
dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thali...   139   3e-31

>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  149 bits (375), Expect = 3e-34
 Identities = 86/164 (52%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
 Frame = +1

Query: 4    RCKVCDLEVNSLDNARDTEAESNQGNTVSEDDQDDIGGFAAYSGCLHKLKSSEKQLGTPL 183
            RC+  D    S+    D     N+G    + D DDIGGFA  +GCLHKLK SEKQ+GTPL
Sbjct: 706  RCQNYDERPESV-REEDGFKSKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTPL 764

Query: 184  EEDLGSWGHHFSSMSVPDQIFQASCGDEVTFVFTNQVDGKLIPIES-TRSIPREMEAQHG 360
            EEDLGSWGHHF S SVPD IFQAS GDEVTFVFTNQVDGKL+P+ES  R+  + +EA   
Sbjct: 765  EEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQGVEANKN 824

Query: 361  HSGIKERPKNQRTPLVWQPRLLPSPTPSCNGDAIIDKLSGSCKP 492
             S   +R K  + P +       +P  S  GD+I    S S KP
Sbjct: 825  QS--DKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISSSSSKP 866


>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  145 bits (367), Expect = 3e-33
 Identities = 85/164 (51%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
 Frame = +1

Query: 4    RCKVCDLEVNSLDNARDTEAESNQGNTVSEDDQDDIGGFAAYSGCLHKLKSSEKQLGTPL 183
            RC+  D    S+      E++ N+G    + D DDIGGFA  +GCLHKLK SEKQ+GT L
Sbjct: 727  RCQNYDERPESVREEDGFESK-NEGCQSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTAL 785

Query: 184  EEDLGSWGHHFSSMSVPDQIFQASCGDEVTFVFTNQVDGKLIPIES-TRSIPREMEAQHG 360
            EEDLGSWGHHF S SVPD IFQAS GDEVTFVFTNQVDGKL+P+ES  R+  + +EA   
Sbjct: 786  EEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQGVEANKN 845

Query: 361  HSGIKERPKNQRTPLVWQPRLLPSPTPSCNGDAIIDKLSGSCKP 492
             S   +R K  + P +       +P  S  GD+I    S S KP
Sbjct: 846  QS--DKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISSSSSKP 887


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  145 bits (367), Expect = 3e-33
 Identities = 85/164 (51%), Positives = 103/164 (62%), Gaps = 1/164 (0%)
 Frame = +1

Query: 4    RCKVCDLEVNSLDNARDTEAESNQGNTVSEDDQDDIGGFAAYSGCLHKLKSSEKQLGTPL 183
            RC+  D    S+      E++ N+G    + D DDIGGFA  +GCLHKLK SEKQ+GT L
Sbjct: 905  RCQNYDERPESVREEDGFESK-NEGCQSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTAL 963

Query: 184  EEDLGSWGHHFSSMSVPDQIFQASCGDEVTFVFTNQVDGKLIPIES-TRSIPREMEAQHG 360
            EEDLGSWGHHF S SVPD IFQAS GDEVTFVFTNQVDGKL+P+ES  R+  + +EA   
Sbjct: 964  EEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQVDGKLVPVESKVRANMQGVEANKN 1023

Query: 361  HSGIKERPKNQRTPLVWQPRLLPSPTPSCNGDAIIDKLSGSCKP 492
             S   +R K  + P +       +P  S  GD+I    S S KP
Sbjct: 1024 QS--DKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISSSSSKP 1065


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
            communis] gi|223542157|gb|EEF43701.1| DNA repair and
            recombination protein RAD54B, putative [Ricinus communis]
          Length = 940

 Score =  143 bits (361), Expect = 1e-32
 Identities = 84/167 (50%), Positives = 108/167 (64%), Gaps = 3/167 (1%)
 Frame = +1

Query: 1    IRCKVCDLEVNSLDNARDTEAESNQGNTVSEDDQDDIGGFAAYSGCLHKLKSSEKQLGTP 180
            + C  C    + L++  D +   ++    S+++  DIGGFA  +G LH+LKSSEKQ+GTP
Sbjct: 731  MNCDRCLFNDDGLESIMDEDGSVSR-RCKSDEEVFDIGGFAKIAGILHELKSSEKQVGTP 789

Query: 181  LEEDLGSWGHHFSSMSVPDQIFQASCGDEVTFVFTNQVDGKLIPIESTRSIPREMEA--- 351
            LEEDLGSWGHHF S SVPD I QAS GDEVTFVFTNQVDGKL+PIEST S P+ +E    
Sbjct: 790  LEEDLGSWGHHFHSTSVPDAILQASAGDEVTFVFTNQVDGKLVPIESTAS-PKMLEIKGN 848

Query: 352  QHGHSGIKERPKNQRTPLVWQPRLLPSPTPSCNGDAIIDKLSGSCKP 492
            Q+ H G +   +  R  L    +LL S   S + D++ + LS S KP
Sbjct: 849  QNQHDGKENMSRTSR--LFQHQKLLQS--ISASRDSLEETLSASFKP 891


>dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
          Length = 959

 Score =  139 bits (349), Expect = 3e-31
 Identities = 70/130 (53%), Positives = 93/130 (71%)
 Frame = +1

Query: 7    CKVCDLEVNSLDNARDTEAESNQGNTVSEDDQDDIGGFAAYSGCLHKLKSSEKQLGTPLE 186
            C  C  + +  +N  +   E+N  +   + DQ+DIGGFA  +GC + LK+SE+Q+GTPLE
Sbjct: 772  CSRCQNDASGTENIEEGN-ENNVDDNACQIDQEDIGGFAKDAGCFNLLKNSERQVGTPLE 830

Query: 187  EDLGSWGHHFSSMSVPDQIFQASCGDEVTFVFTNQVDGKLIPIESTRSIPREMEAQHGHS 366
            EDLGSWGHHF+S SVPD I QAS GDEVTFVFTNQVDGKL+PIES  S P+ +E++  + 
Sbjct: 831  EDLGSWGHHFTSKSVPDAILQASAGDEVTFVFTNQVDGKLVPIESNVS-PKTVESEEHN- 888

Query: 367  GIKERPKNQR 396
              + +P N+R
Sbjct: 889  --RNQPVNKR 896


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