BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00018764
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    94   4e-17
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]    90   6e-16
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    88   2e-15
dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like ...    88   2e-15
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    87   3e-15

>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 55/144 (38%), Positives = 79/144 (54%)
 Frame = +3

Query: 318 LAWNCQGLGGPKTIPALKNLLKHNSTDILFLSETKNMPKRMKKWSQMLKFQHASFVDPVG 497
           ++WNCQGL  P TI  LK + K +  DILFL ETKN    + K    L +     V+P G
Sbjct: 3   ISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEG 62

Query: 498 RKGGLALFWNDAANISSLSASDFYILVRITNSYHNFSWYLICVYCSCDSSIRLSQLKHLS 677
           R GGLA+FW     I  L A     L+ +  S  N  W++ CVY    + +R    +HL+
Sbjct: 63  RSGGLAIFWKSHLEIEFLYADK--NLMDLQVSSRNKVWFISCVYGLPVTHMRPKLWEHLN 120

Query: 678 NITSRISDPFVIIGDFNDISCSNE 749
           +I  + ++ + +IGDFNDI  ++E
Sbjct: 121 SIGLKRAEAWCLIGDFNDIRSNDE 144


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 53/147 (36%), Positives = 75/147 (51%)
 Frame = +3

Query: 309 MLALAWNCQGLGGPKTIPALKNLLKHNSTDILFLSETKNMPKRMKKWSQMLKFQHASFVD 488
           M+ ++WNC+GLG P+T+ AL  + K    D +FL ET     +++K    L F+ A  VD
Sbjct: 307 MIGISWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVD 366

Query: 489 PVGRKGGLALFWNDAANISSLSASDFYILVRITNSYHNFSWYLICVYCSCDSSIRLSQLK 668
            VGR GGLA  W  A   S L  S  +I + ++       W +   Y   D S R     
Sbjct: 367 RVGRGGGLAFLWRKAGMFSLLXYSQSHIDMEVSEE-DGLQWRVTGFYGFPDRSQRHLSWN 425

Query: 669 HLSNITSRISDPFVIIGDFNDISCSNE 749
            L ++ S  S P+  +GDFNDI C+ E
Sbjct: 426 LLRSLYSASSLPWCCLGDFNDIVCNEE 452


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 53/139 (38%), Positives = 76/139 (54%)
 Frame = +3

Query: 333 QGLGGPKTIPALKNLLKHNSTDILFLSETKNMPKRMKKWSQMLKFQHASFVDPVGRKGGL 512
           +G+G P T   L NL K    D+LFL ET N  + +   + +L F +     P G  GGL
Sbjct: 370 KGIGVPLTQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSGGL 429

Query: 513 ALFWNDAANISSLSASDFYILVRITNSYHNFSWYLICVYCSCDSSIRLSQLKHLSNITSR 692
           AL W D+  +S+L   D +I V I  S +N ++YL  VY     S R S   H  N++  
Sbjct: 430 ALLWKDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFENLSKT 487

Query: 693 ISDPFVIIGDFNDISCSNE 749
            +DP+++IGDFN+I  +NE
Sbjct: 488 RNDPWILIGDFNEILSNNE 506


>dbj|BAB08714.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1197

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 49/145 (33%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
 Frame = +3

Query: 318 LAWNCQGLGGPKTIPALKNLLKHNSTDILFLSETKNMPKRMKKWSQMLKFQHASFVDPVG 497
           ++WNCQG+G PKT+  ++ +LK  S D++FL ET N  + + K    LK  +   V P G
Sbjct: 1   MSWNCQGIGNPKTVRRVREILKKLSPDVIFLMETMNQDEVVLKKLDFLKRYNHFLVSPSG 60

Query: 498 R-KGGLALFWNDAANISSLSASDFYILVRITNSYHNFSWYLICVYCSCDSSIRLSQLKHL 674
           + KGGLALFW     ++ +S+ D +I  R+  S+   S+    VY   + S + +  + L
Sbjct: 61  QGKGGLALFWKHDVEMAIVSSCDNFIDARV--SFKRISFLATYVYGEPEQSKKGATWEKL 118

Query: 675 SNITSRISDPFVIIGDFNDISCSNE 749
             +     +P+ + GDFN+I  ++E
Sbjct: 119 KCLADNREEPWFLTGDFNEILDNSE 143


>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 53/138 (38%), Positives = 75/138 (54%)
 Frame = +3

Query: 336 GLGGPKTIPALKNLLKHNSTDILFLSETKNMPKRMKKWSQMLKFQHASFVDPVGRKGGLA 515
           G+G P T   L NL K    D+LFL ET N  + +   + +L F +     P G  GGLA
Sbjct: 391 GIGVPLTQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSGGLA 450

Query: 516 LFWNDAANISSLSASDFYILVRITNSYHNFSWYLICVYCSCDSSIRLSQLKHLSNITSRI 695
           L W D+  +S+L   D +I V I  S +N ++YL  VY     S R S   H  N++   
Sbjct: 451 LLWKDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFENLSKTR 508

Query: 696 SDPFVIIGDFNDISCSNE 749
           +DP+++IGDFN+I  +NE
Sbjct: 509 NDPWILIGDFNEILSNNE 526