BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00018678
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea m...    40   2e-07
ref|XP_002520500.1| pentatricopeptide repeat-containing protein,...    37   3e-06
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...    39   5e-06
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...    39   6e-06
ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containi...    40   8e-06

>tpg|DAA53485.1| TPA: hypothetical protein ZEAMMB73_494075 [Zea mays]
          Length = 830

 Score = 40.0 bits (92), Expect(2) = 2e-07
 Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 7/40 (17%)
 Frame = -3

Query: 276 KCGSLEIG----NWI*---DIVSWNSIISGYWIHE*GKEA 178
           KCG LE G    NWI    ++VSWNS+ISGY +H  G+E+
Sbjct: 505 KCGCLETGRYIFNWIGRRRNVVSWNSLISGYGMHGFGRES 544



 Score = 40.0 bits (92), Expect(2) = 2e-07
 Identities = 18/35 (51%), Positives = 22/35 (62%)
 Frame = -2

Query: 184 RSKFYYFKYMIRNGVSSNAIKVVSVLGACGHVGIL 80
           R     F+ MI  G+S N I  VSVLGAC HVG++
Sbjct: 542 RESLQVFEEMIEEGISPNIITFVSVLGACSHVGLV 576


>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 414

 Score = 37.4 bits (85), Expect(3) = 3e-06
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = -2

Query: 166 FKYMIRNGVSSNAIKVVSVLGACGHVGIL 80
           FK M RNGV  + I  VSVLGAC H G++
Sbjct: 368 FKDMTRNGVFPSPISFVSVLGACSHAGLV 396



 Score = 35.4 bits (80), Expect(3) = 3e-06
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
 Frame = -3

Query: 279 SKCGSLEIGNWI*D------IVSWNSIISGYWIHE*GKEA 178
           ++CG L++   + D      +VSWNS+IS Y +H  GK+A
Sbjct: 325 ARCGKLQLAQHVFDQMDKRDVVSWNSLISSYGVHGFGKKA 364



 Score = 22.3 bits (46), Expect(3) = 3e-06
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -1

Query: 332 RGGFGSILLVVNSLMNMY 279
           R G  SIL V++SL+ MY
Sbjct: 307 RRGLDSILPVISSLVTMY 324


>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score = 38.5 bits (88), Expect(3) = 5e-06
 Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 6/40 (15%)
 Frame = -3

Query: 279 SKCGSLEIGNWI*D------IVSWNSIISGYWIHE*GKEA 178
           ++CG LE+G  + D      +VSWNS+IS Y +H  GK+A
Sbjct: 324 ARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKA 363



 Score = 34.7 bits (78), Expect(3) = 5e-06
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -2

Query: 166 FKYMIRNGVSSNAIKVVSVLGACGHVGILN 77
           F+ M  NGV  + I  VSVLGAC H G+++
Sbjct: 367 FEEMTYNGVEPSPISFVSVLGACSHAGLVD 396



 Score = 21.2 bits (43), Expect(3) = 5e-06
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 332 RGGFGSILLVVNSLMNMY 279
           R G  SIL V+++L+ MY
Sbjct: 306 RKGLDSILPVISALVTMY 323


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score = 38.5 bits (88), Expect(2) = 6e-06
 Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 6/40 (15%)
 Frame = -3

Query: 279 SKCGSLEIGNWI*------DIVSWNSIISGYWIHE*GKEA 178
           ++CG+LE+G+ +       D+VSWNS+IS Y IH  G++A
Sbjct: 332 ARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKA 371



 Score = 36.6 bits (83), Expect(2) = 6e-06
 Identities = 17/35 (48%), Positives = 21/35 (60%)
 Frame = -2

Query: 184 RSKFYYFKYMIRNGVSSNAIKVVSVLGACGHVGIL 80
           R     FK MI  G+S + I  VSVLGAC H G++
Sbjct: 369 RKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLV 403


>ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
          Length = 654

 Score = 40.0 bits (92), Expect(2) = 8e-06
 Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 7/40 (17%)
 Frame = -3

Query: 276 KCGSLEIGN----WI*---DIVSWNSIISGYWIHE*GKEA 178
           +CG LE+G     WI    D+VSWNS+ISGY +H  G EA
Sbjct: 329 RCGCLEVGRHIFKWIGHRRDVVSWNSLISGYGMHGFGPEA 368



 Score = 34.7 bits (78), Expect(2) = 8e-06
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -2

Query: 166 FKYMIRNGVSSNAIKVVSVLGACGHVGILN 77
           F+ MI  G S + I  +SVLGAC H G++N
Sbjct: 372 FEEMIHVGFSPSIITFISVLGACSHAGLVN 401