BLASTX nr result

ID: Aconitum21_contig00016424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016424
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA05365.1| high mobility group protein [Solanum tuberosum]       127   9e-28
gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]                123   1e-26
gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]       122   3e-26
ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-li...   122   3e-26
emb|CBI37645.3| unnamed protein product [Vitis vinifera]              122   3e-26

>emb|CAA05365.1| high mobility group protein [Solanum tuberosum]
          Length = 141

 Score =  127 bits (319), Expect = 9e-28
 Identities = 60/72 (83%), Positives = 65/72 (90%)
 Frame = -3

Query: 218 RPPSAFFVFMEGFRKTYKEKHPDNKSVALVGKAGGEKWKSLSETEKAPYVAKAEKRKIEY 39
           RPPSAFFVFME FRKTYKEKHP+NKSVA+VGKAGG+KWK LS+ EKAPY AKAEKRK EY
Sbjct: 38  RPPSAFFVFMEEFRKTYKEKHPNNKSVAVVGKAGGDKWKQLSDEEKAPYQAKAEKRKAEY 97

Query: 38  TKSMDAYNNKLA 3
            K+MDAYN KLA
Sbjct: 98  QKNMDAYNKKLA 109


>gb|AAB61215.1| DNA-binding protein [Nicotiana tabacum]
          Length = 142

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/72 (81%), Positives = 62/72 (86%)
 Frame = -3

Query: 218 RPPSAFFVFMEGFRKTYKEKHPDNKSVALVGKAGGEKWKSLSETEKAPYVAKAEKRKIEY 39
           RPPSAFFVFME FRKTYKEKHP+NKSVA VGKAGG+ WK LSE EKAPY AKAEKRK EY
Sbjct: 38  RPPSAFFVFMEEFRKTYKEKHPNNKSVAAVGKAGGDAWKKLSEAEKAPYQAKAEKRKAEY 97

Query: 38  TKSMDAYNNKLA 3
            K+MDAYN K A
Sbjct: 98  QKNMDAYNRKQA 109


>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
          Length = 146

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/72 (79%), Positives = 63/72 (87%)
 Frame = -3

Query: 218 RPPSAFFVFMEGFRKTYKEKHPDNKSVALVGKAGGEKWKSLSETEKAPYVAKAEKRKIEY 39
           RPPSAFFVFME FRKTYKEKHP+NKSVA VGKAGG+KWK L++ EKAP++AKAEKRK EY
Sbjct: 38  RPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKRKQEY 97

Query: 38  TKSMDAYNNKLA 3
            KSM AYN K A
Sbjct: 98  EKSMQAYNRKQA 109


>ref|XP_002280084.2| PREDICTED: high mobility group B2 protein-like isoform 1 [Vitis
           vinifera]
          Length = 156

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/72 (80%), Positives = 63/72 (87%)
 Frame = -3

Query: 218 RPPSAFFVFMEGFRKTYKEKHPDNKSVALVGKAGGEKWKSLSETEKAPYVAKAEKRKIEY 39
           RP SAFFVFME FRK YKEKHP NKSV++VGKAGG+KWKSLSE EKAPYVAKAEKRK EY
Sbjct: 49  RPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEY 108

Query: 38  TKSMDAYNNKLA 3
            KSM AYN ++A
Sbjct: 109 NKSMQAYNKRMA 120


>emb|CBI37645.3| unnamed protein product [Vitis vinifera]
          Length = 154

 Score =  122 bits (306), Expect = 3e-26
 Identities = 58/72 (80%), Positives = 63/72 (87%)
 Frame = -3

Query: 218 RPPSAFFVFMEGFRKTYKEKHPDNKSVALVGKAGGEKWKSLSETEKAPYVAKAEKRKIEY 39
           RP SAFFVFME FRK YKEKHP NKSV++VGKAGG+KWKSLSE EKAPYVAKAEKRK EY
Sbjct: 47  RPASAFFVFMEEFRKQYKEKHPANKSVSVVGKAGGDKWKSLSEAEKAPYVAKAEKRKTEY 106

Query: 38  TKSMDAYNNKLA 3
            KSM AYN ++A
Sbjct: 107 NKSMQAYNKRMA 118


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