BLASTX nr result
ID: Aconitum21_contig00016199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Aconitum21_contig00016199
(528 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi... 231 5e-59
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi... 224 5e-57
ref|XP_002528030.1| pentatricopeptide repeat-containing protein,... 221 7e-56
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi... 216 1e-54
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi... 216 1e-54
>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Vitis vinifera]
Length = 725
Score = 231 bits (589), Expect = 5e-59
Identities = 114/179 (63%), Positives = 142/179 (79%), Gaps = 4/179 (2%)
Frame = +1
Query: 1 SNFSVYSWNALLRGSVVSGDG----VVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQ 168
S+ SVY+WNALLRG+V+SG + TY +MRELGVELNVY+FSC+IKS AG++A Q
Sbjct: 213 SSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQ 272
Query: 169 GLKTHGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFA 348
GLK H LL+KNG VD SI+ +TSLID YFKC K+KLAR +FEEI DVVVWGAMI+GF
Sbjct: 273 GLKAHALLIKNGLVDSSIL-RTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFG 331
Query: 349 HNGMYKESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIKTKSYADE 525
HN + +E+LEY RWM REG+ PNSVI+T +LP IGE+ A LG+E+HAY +KTKSY+ +
Sbjct: 332 HNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQ 390
Score = 93.2 bits (230), Expect = 2e-17
Identities = 53/162 (32%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Frame = +1
Query: 40 GSVVSGDG-------VVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLKTHGLLVK 198
G++++G G +E MR G+ N + ++ + A G + H +VK
Sbjct: 324 GAMIAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVK 383
Query: 199 NGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNGMYKESLE 378
+ +Q++LID Y KC + RQVF + V W A++SG+ NG ++L
Sbjct: 384 TKSYSKQVFIQSALIDMYCKCGDMASGRQVFYASTERNAVSWTALMSGYVSNGRLDQALR 443
Query: 379 YFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIK 504
WM +EG P+ V V VLP E+RA GKEIH+YA+K
Sbjct: 444 SIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVK 485
Score = 91.3 bits (225), Expect = 8e-17
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Frame = +1
Query: 19 SWNALLRGSVVSG--DGVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLKTHGLL 192
SW AL+ G V +G D + + M++ G +V T + ++ A AL QG + H
Sbjct: 424 SWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYA 483
Query: 193 VKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNGMYKES 372
VKNGF+ ++ + TSL+ Y KC + + ++F+ + +V+ W AMI + NG E+
Sbjct: 484 VKNGFLP-NVSIATSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEA 542
Query: 373 LEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIK 504
+ FR M P+SV + +L GE+R LGKEIH +K
Sbjct: 543 VGVFRSMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILK 586
Score = 61.6 bits (148), Expect = 7e-08
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 97 GVELNVYTFSCLIKSLAGSSALTQGLKTHGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKL 276
G+ +N TFS L+++ S +LT G + H + NG ++ + ++T L+ Y C ++
Sbjct: 146 GIPVNPTTFSSLLRACVESKSLTHGKQIHVHIRING-LENNEFLRTKLVHMYTSCGSLED 204
Query: 277 ARQVFEEIFMSDVVVWGAMISGFAHNGM--YKESLEYFRWMVREGVEPNSVIVTAVLPAI 450
AR VF+ + V W A++ G +G Y+E+L + M GVE N + ++ +
Sbjct: 205 ARGVFDGVSSKSVYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSF 264
Query: 451 GEIRAPYLGKEIHAYAIK 504
A G + HA IK
Sbjct: 265 AGATAFRQGLKAHALLIK 282
>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Glycine max]
Length = 682
Score = 224 bits (572), Expect = 5e-57
Identities = 114/174 (65%), Positives = 140/174 (80%), Gaps = 4/174 (2%)
Frame = +1
Query: 10 SVYSWNALLRGSVVSGD----GVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLK 177
SVY WNALLRG+VVSG V++TY +MR LGVELNVY+FS +IKS AG+ A +QGLK
Sbjct: 178 SVYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLK 237
Query: 178 THGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNG 357
THGLL+KNG VD + I++TSLID YFKC KV+LA +VFEEI DVVVWGAM++GFAHN
Sbjct: 238 THGLLIKNGLVD-NYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNR 296
Query: 358 MYKESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIKTKSYA 519
+ +E LEY RWMV EGV+PNSV++T V+P IGE+ A LG+E HAY +KTKSY+
Sbjct: 297 LQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYS 350
Score = 93.6 bits (231), Expect = 2e-17
Identities = 60/166 (36%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Frame = +1
Query: 13 VYSWNALLRGSVVSG--DGVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLKTHG 186
V W A+L G + V+E M E GV+ N + +I + A G + H
Sbjct: 282 VVVWGAMLAGFAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHA 341
Query: 187 LLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNGMYK 366
+VK + VQ+SLID Y KC + AR+VF +VV W A++SG+A NG +
Sbjct: 342 YVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVCWTALMSGYAANGKLE 401
Query: 367 ESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIK 504
++L WM +EG P+ V + VLP ++RA GK+IHAYA+K
Sbjct: 402 QALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALK 447
Score = 82.4 bits (202), Expect = 4e-14
Identities = 51/167 (30%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Frame = +1
Query: 10 SVYSWNALLRGSVVSG--DGVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLKTH 183
+V W AL+ G +G + + + + M++ G +V T + ++ A AL QG + H
Sbjct: 383 NVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIH 442
Query: 184 GLLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNGMY 363
+K+ F+ ++ V +SL+ Y KC V+ +R++F+ + +V+ W AMI + NG
Sbjct: 443 AYALKHWFLP-NVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYL 501
Query: 364 KESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIK 504
E+L R M P+SV + +L GE + LGKEIH +K
Sbjct: 502 CEALGVIRSMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILK 548
>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 456
Score = 221 bits (562), Expect = 7e-56
Identities = 113/181 (62%), Positives = 141/181 (77%), Gaps = 6/181 (3%)
Frame = +1
Query: 1 SNFSVYSWNALLRGSVVSG----DGVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQ 168
S+ SVY WNALLRG+V+SG + VV Y +MRELGVELNVY+FS +IKS +G+SA Q
Sbjct: 178 SSTSVYPWNALLRGTVISGGKRYNDVVSAYGQMRELGVELNVYSFSNVIKSFSGASAFKQ 237
Query: 169 GLKTHGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMS--DVVVWGAMISG 342
GLKTH LL+KNGFVD SI+ +T LIDFYFKC K+KLA +VFEE+ D+VVWGAMI+G
Sbjct: 238 GLKTHALLIKNGFVDSSIL-RTCLIDFYFKCGKIKLAHRVFEEMPDRGIDIVVWGAMIAG 296
Query: 343 FAHNGMYKESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIKTKSYAD 522
FAHN +E+L+Y RWMV EG+ PNSVIVT +LP IGE A LG+E+H Y +KTK Y++
Sbjct: 297 FAHNRYQREALDYLRWMVSEGLYPNSVIVTTILPVIGEAWARKLGQEVHGYVVKTKRYSN 356
Query: 523 E 525
+
Sbjct: 357 Q 357
Score = 60.8 bits (146), Expect = 1e-07
Identities = 31/107 (28%), Positives = 53/107 (49%)
Frame = +1
Query: 97 GVELNVYTFSCLIKSLAGSSALTQGLKTHGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKL 276
G+ N + ++ + + A G + HG +VK + +QT LID Y KC +
Sbjct: 317 GLYPNSVIVTTILPVIGEAWARKLGQEVHGYVVKTKRYSNQLTIQTGLIDMYCKCGDMVS 376
Query: 277 ARQVFEEIFMSDVVVWGAMISGFAHNGMYKESLEYFRWMVREGVEPN 417
R+VF + + W A++SG+ NG +++L WM +EG P+
Sbjct: 377 GRRVFYGSMERNAISWTALMSGYVSNGRPEQALRSVAWMQQEGFRPD 423
>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 216 bits (551), Expect = 1e-54
Identities = 107/179 (59%), Positives = 141/179 (78%), Gaps = 4/179 (2%)
Frame = +1
Query: 1 SNFSVYSWNALLRGSVVSGD----GVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQ 168
S+ SVY WNALLRG+V++G ++ TY +MR LGVELNVY+F+ +IKS AG+SA TQ
Sbjct: 176 SSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQ 235
Query: 169 GLKTHGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFA 348
GLK HGLL+KNG + GS ++ T+L+D YFKC K+KLARQ+F EI DVVVWG++I+GFA
Sbjct: 236 GLKAHGLLIKNGLI-GSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFA 294
Query: 349 HNGMYKESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIKTKSYADE 525
HN + +E+LEY R M+ +G+ PNSVI+T +LP IGEI A LG+E+HAY IKTKSY+ +
Sbjct: 295 HNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQ 353
Score = 88.6 bits (218), Expect = 5e-16
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Frame = +1
Query: 40 GSVVSGDG-------VVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLKTHGLLVK 198
GS+++G +E +M + G+ N + ++ + A G + H ++K
Sbjct: 287 GSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIK 346
Query: 199 NGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNGMYKESLE 378
I +Q++LID Y KC + R VF + + W A++SG+A NG ++++
Sbjct: 347 TKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVR 406
Query: 379 YFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIK 504
WM +EG P+ V V +LP ++RA GKEIHAYA+K
Sbjct: 407 SVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMK 448
Score = 72.8 bits (177), Expect = 3e-11
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Frame = +1
Query: 22 WNALLRGSVVSG--DGVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLKTHGLLV 195
W AL+ G ++G + V + + M++ G ++ T + ++ A AL G + H +
Sbjct: 388 WTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAM 447
Query: 196 KNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNGMYKESL 375
KN F+ IV +SL+ Y KC + ++F + +V++W AMI + N E++
Sbjct: 448 KNCFLPNVSIV-SSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAI 506
Query: 376 EYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIKTK 510
+ FR M P++V ++ +L E + +GKEIH +K K
Sbjct: 507 DIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRK 551
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/133 (26%), Positives = 63/133 (47%)
Frame = +1
Query: 118 TFSCLIKSLAGSSALTQGLKTHGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEE 297
T S ++ + L G + HG ++K F + V L+ Y KC VK+A+ VFE
Sbjct: 523 TMSRILYICSEQKMLKMGKEIHGQVLKRKF-EPVHFVSAELVKLYGKCGAVKMAKMVFEA 581
Query: 298 IFMSDVVVWGAMISGFAHNGMYKESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLG 477
I + + W A+I + +G ++E+++ F M G+ PN VL E A ++
Sbjct: 582 IPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKE--AGFVD 639
Query: 478 KEIHAYAIKTKSY 516
+ + + + + Y
Sbjct: 640 EALRIFKLMSVRY 652
>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 216 bits (551), Expect = 1e-54
Identities = 107/179 (59%), Positives = 141/179 (78%), Gaps = 4/179 (2%)
Frame = +1
Query: 1 SNFSVYSWNALLRGSVVSGD----GVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQ 168
S+ SVY WNALLRG+V++G ++ TY +MR LGVELNVY+F+ +IKS AG+SA TQ
Sbjct: 176 SSKSVYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQ 235
Query: 169 GLKTHGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFA 348
GLK HGLL+KNG + GS ++ T+L+D YFKC K+KLARQ+F EI DVVVWG++I+GFA
Sbjct: 236 GLKAHGLLIKNGLI-GSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFA 294
Query: 349 HNGMYKESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIKTKSYADE 525
HN + +E+LEY R M+ +G+ PNSVI+T +LP IGEI A LG+E+HAY IKTKSY+ +
Sbjct: 295 HNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQ 353
Score = 88.6 bits (218), Expect = 5e-16
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Frame = +1
Query: 40 GSVVSGDG-------VVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLKTHGLLVK 198
GS+++G +E +M + G+ N + ++ + A G + H ++K
Sbjct: 287 GSIIAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIK 346
Query: 199 NGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNGMYKESLE 378
I +Q++LID Y KC + R VF + + W A++SG+A NG ++++
Sbjct: 347 TKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAICWTALMSGYALNGRLEQAVR 406
Query: 379 YFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIK 504
WM +EG P+ V V +LP ++RA GKEIHAYA+K
Sbjct: 407 SVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMK 448
Score = 72.8 bits (177), Expect = 3e-11
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Frame = +1
Query: 22 WNALLRGSVVSG--DGVVETYMKMRELGVELNVYTFSCLIKSLAGSSALTQGLKTHGLLV 195
W AL+ G ++G + V + + M++ G ++ T + ++ A AL G + H +
Sbjct: 388 WTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAM 447
Query: 196 KNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEEIFMSDVVVWGAMISGFAHNGMYKESL 375
KN F+ IV +SL+ Y KC + ++F + +V++W AMI + N E++
Sbjct: 448 KNCFLPNVSIV-SSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAI 506
Query: 376 EYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLGKEIHAYAIKTK 510
+ FR M P++V ++ +L E + +GKEIH +K K
Sbjct: 507 DIFRAMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRK 551
Score = 57.8 bits (138), Expect = 1e-06
Identities = 35/133 (26%), Positives = 63/133 (47%)
Frame = +1
Query: 118 TFSCLIKSLAGSSALTQGLKTHGLLVKNGFVDGSIIVQTSLIDFYFKCRKVKLARQVFEE 297
T S ++ + L G + HG ++K F + V L+ Y KC VK+A+ VFE
Sbjct: 523 TMSRILYICSEQKMLKMGKEIHGQVLKRKF-EPVHFVSAELVKLYGKCGAVKMAKMVFEA 581
Query: 298 IFMSDVVVWGAMISGFAHNGMYKESLEYFRWMVREGVEPNSVIVTAVLPAIGEIRAPYLG 477
I + + W A+I + +G ++E+++ F M G+ PN VL E A ++
Sbjct: 582 IPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVLSICKE--AGFVD 639
Query: 478 KEIHAYAIKTKSY 516
+ + + + + Y
Sbjct: 640 EALRIFKLMSVRY 652