BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016021
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospe...    47   7e-11
gb|AFB73912.1| polyprotein [Citrus sinensis]                           47   9e-09
emb|CAN68884.1| hypothetical protein VITISV_039230 [Vitis vinifera]    47   8e-08
gb|AFB73911.1| polyprotein [Citrus sinensis]                           46   3e-07
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    43   1e-06

>gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospermum
           erythrorhizon]
          Length = 244

 Score = 46.6 bits (109), Expect(2) = 7e-11
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
 Frame = +2

Query: 107 LESHGCRVTAEDGVLEVVCGSKVVMKSVHH--VYRLVGVVLGGETARACGIVKLDDKVQ 277
           LE +GC++  EDGVL+VV  S VVMK V H  +Y LVG ++ G+   A G+V   D+ +
Sbjct: 50  LEKNGCKIVLEDGVLKVVRRSLVVMKGVSHGNLYPLVGTMVTGDL--AVGVVGHKDQTE 106



 Score = 45.1 bits (105), Expect(2) = 7e-11
 Identities = 19/33 (57%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   GRGTIQIRVHDGVVRTLMDVRHVPGLQKNLLSL 99
           G GTI++++HDG + TL DVRH+  L KNL+SL
Sbjct: 15  GVGTIRVKMHDGTIITLNDVRHIQDLHKNLISL 47


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 46.6 bits (109), Expect(2) = 9e-09
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +1

Query: 1   GRGTIQIRVHDGVVRTLMDVRHVPGLQKNLLSL 99
           G GTI+I++ DG +RT+ +VRHV GL+KNLLSL
Sbjct: 332 GIGTIKIKMFDGTIRTIEEVRHVNGLKKNLLSL 364



 Score = 37.7 bits (86), Expect(2) = 9e-09
 Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
 Frame = +2

Query: 74  GCRRTCYLFGNLESHGCRVTAEDGVLEVVCGSKVVMKSVHHVYRLVGVVLGGET---ARA 244
           G ++     G ++SHGC+   E+G++++V G+ V+MK+      L   +L GET   A A
Sbjct: 356 GLKKNLLSLGQMDSHGCKTHVENGIMKIVKGALVLMKAEKICANL--FMLKGETLQEADA 413

Query: 245 C 247
           C
Sbjct: 414 C 414


>emb|CAN68884.1| hypothetical protein VITISV_039230 [Vitis vinifera]
          Length = 220

 Score = 47.0 bits (110), Expect(2) = 8e-08
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +1

Query: 1   GRGTIQIRVHDGVVRTLMDVRHVPGLQKNLLSL 99
           G  TI+I+++DG +RTL DVRHVP L+KNL+SL
Sbjct: 109 GIDTIRIKMYDGFIRTLTDVRHVPKLKKNLISL 141



 Score = 34.3 bits (77), Expect(2) = 8e-08
 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +2

Query: 101 GNLESHGCRVTAEDGVLEVVCGSKVVM--KSVHHVYRLVGVVLGG 229
           G L+S+GC   AE GVL +  G+ VVM  K ++ +Y L G  + G
Sbjct: 142 GTLDSNGCTYKAEGGVLRISKGALVVMKGKKINGLYTLKGSTVIG 186


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 46.2 bits (108), Expect(2) = 3e-07
 Identities = 21/33 (63%), Positives = 28/33 (84%)
 Frame = +1

Query: 1   GRGTIQIRVHDGVVRTLMDVRHVPGLQKNLLSL 99
           G GTI+I++ DG +RT+ +VRHV GL+KNLLSL
Sbjct: 332 GIGTIKIKMFDGTIRTIGEVRHVNGLKKNLLSL 364



 Score = 32.7 bits (73), Expect(2) = 3e-07
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +2

Query: 74  GCRRTCYLFGNLESHGCRVTAEDGVLEVVCGSKVVMK 184
           G ++     G ++SHG +   E+G++++V G+ V+MK
Sbjct: 356 GLKKNLLSLGQMDSHGYKTHVENGIMKIVKGALVLMK 392


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 43.1 bits (100), Expect(2) = 1e-06
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   GRGTIQIRVHDGVVRTLMDVRHVPGLQKNLLSL 99
           G G+I++R HDG  R L DVR+VP L+KNL+SL
Sbjct: 265 GIGSIKLRNHDGSTRILRDVRYVPKLKKNLISL 297



 Score = 33.9 bits (76), Expect(2) = 1e-06
 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 101 GNLESHGCRVTAEDGVLEVVCGSKVVMKSV--HHVYRLVGVVLGGETARACGIVKLD 265
           G LES G  VT  DG+L+   G+ V++K V  +++Y   G  + G  A A    K D
Sbjct: 298 GALESKGLVVTMRDGILKATSGALVMLKGVMKNNLYYYQGSTVVGTVAAATSSSKKD 354