BLASTX nr result

ID: Aconitum21_contig00016000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Aconitum21_contig00016000
         (850 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525140.1| ring finger protein, putative [Ricinus commu...   150   3e-34
ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   144   3e-32
ref|XP_003636091.1| RING finger family protein [Medicago truncat...   133   6e-29
ref|XP_004156099.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   131   2e-28
ref|XP_004140242.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...   131   2e-28

>ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
           gi|223535599|gb|EEF37267.1| ring finger protein,
           putative [Ricinus communis]
          Length = 254

 Score =  150 bits (380), Expect = 3e-34
 Identities = 90/227 (39%), Positives = 118/227 (51%), Gaps = 2/227 (0%)
 Frame = +1

Query: 76  RHRYTLNSRIMITATXXXXXXXXXXXXXHFYARYVLRRQAMRRQAIHQLAISTAAAQVNS 255
           R  Y LNS+IM+ A              H YAR VLRRQA  R  I +L ++TA     +
Sbjct: 38  RDTYDLNSKIMLAAITSLSFVVVLVIVLHIYARCVLRRQARERANIRRLGLATA-----T 92

Query: 256 SEQTRAGLDAAVIASLPIFIYKLDDQVSKDSQVDRDCAVCLSNLEEGEVARLLPNCKHIF 435
           SE  + GLD  VIASLPIF+YK  +   +D+  D++CAVCLS L++ E+AR LPNCKH F
Sbjct: 93  SEPPKTGLDPVVIASLPIFVYKQSNGDQEDN--DQECAVCLSVLQDQEMARSLPNCKHTF 150

Query: 436 HSKCVDAWLRAHSTCPICRTEAKPRVHXXXXXXXXXXXXXXXXXXXXNYSAPCSEGTSDD 615
           H++C+D WL +HSTCPICRTEA+PR+                           +EGTS+ 
Sbjct: 151 HAECIDKWLTSHSTCPICRTEAEPRIQPEPREGPVPAGGAATAPPLEQVG---TEGTSES 207

Query: 616 LGQ--PXXXXXXXXXXXXXXXXXXXEKSDRRSHSNSQTESIRDLETQ 750
             Q                      E+S RR  S +Q + + DLE Q
Sbjct: 208 GNQSSSNKASGSISRLSSFRRILSRERSSRRIQSETQEQGLEDLERQ 254


>ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
          Length = 247

 Score =  144 bits (363), Expect = 3e-32
 Identities = 81/183 (44%), Positives = 105/183 (57%), Gaps = 5/183 (2%)
 Frame = +1

Query: 91  LNSRIMITATXXXXXXXXXXXXXHFYARYVLRRQAMRRQAIHQLAISTAAAQVNSSEQTR 270
           LNS+IM+TA              H YAR VLRR+A RR A+  + +S    +V+S E  +
Sbjct: 28  LNSKIMLTAIVSLSVVIALVITLHIYARCVLRRRARRRSALLSITLS----RVHSDEPPK 83

Query: 271 AGLDAAVIASLPIFIYKLDDQVSKDSQVDRDCAVCLSNLEEGEVARLLPNCKHIFHSKCV 450
            GLD +VI SLP+F +  +D  +++     DCAVCLS LEEGE+ARLLPNCKH FH++C+
Sbjct: 84  TGLDQSVIDSLPMFKFSEND--TQEEGGTTDCAVCLSVLEEGEIARLLPNCKHTFHAECI 141

Query: 451 DAWLRAHSTCPICRTEAKPRV-----HXXXXXXXXXXXXXXXXXXXXNYSAPCSEGTSDD 615
           D WL  HSTCPICRTEA+PR+                          + S  CSEGTS+ 
Sbjct: 142 DKWLGTHSTCPICRTEAEPRLQPEPREAMVMIRTVPPAPAPPSDGTNSSSLACSEGTSEG 201

Query: 616 LGQ 624
             Q
Sbjct: 202 AAQ 204


>ref|XP_003636091.1| RING finger family protein [Medicago truncatula]
           gi|355502026|gb|AES83229.1| RING finger family protein
           [Medicago truncatula] gi|388522379|gb|AFK49251.1|
           unknown [Medicago truncatula]
          Length = 239

 Score =  133 bits (334), Expect = 6e-29
 Identities = 65/142 (45%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
 Frame = +1

Query: 94  NSRIMITATXXXXXXXXXXXXXHFYARYVLRRQAMRRQAIHQLAISTAAAQVNSSEQTRA 273
           N +I++TA              H YARYVL+RQA RR AI QL+++ A A    +E    
Sbjct: 31  NKKILLTAIVSLALVLILVLALHLYARYVLKRQARRRAAIQQLSLTVAQAHTQFAEPANT 90

Query: 274 GLDAAVIASLPIFIYKLDDQVSKDSQVDR---DCAVCLSNLEEGEVARLLPNCKHIFHSK 444
           G+D  +IA+LP F++K   Q  ++  V +   +CAVCLS +E+ E+ RLLPNCKH FH  
Sbjct: 91  GVDPTIIAALPTFLFKQKQQ-EENKNVSKNIVECAVCLSVVEDEEMMRLLPNCKHSFHVG 149

Query: 445 CVDAWLRAHSTCPICRTEAKPR 510
           C+D WL +HSTCP CRT+ +PR
Sbjct: 150 CIDKWLASHSTCPNCRTKVEPR 171


>ref|XP_004156099.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Cucumis sativus]
          Length = 229

 Score =  131 bits (330), Expect = 2e-28
 Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
 Frame = +1

Query: 76  RHRYTLNSRIMITATXXXXXXXXXXXXXHFYARYVLRRQAMRRQAIHQLAISTAAAQVNS 255
           R+ Y LN++IM+TA              H YARY LRR A R+  + +L I    A ++S
Sbjct: 23  RNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGI---LAFIDS 79

Query: 256 SEQ----TRAGLDAAVIASLPIFIYKLDDQVSKDSQVDRDCAVCLSNLEEGEVARLLPNC 423
            +     +R+GLD  V+AS+P+ ++K   +    S    +CAVCLS + +GE AR+LPNC
Sbjct: 80  GDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNC 139

Query: 424 KHIFHSKCVDAWLRAHSTCPICRTEAKP 507
           KH+FH +C+D W  +HSTCPICRTEA P
Sbjct: 140 KHVFHVECIDKWFGSHSTCPICRTEAAP 167


>ref|XP_004140242.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like, partial [Cucumis
           sativus]
          Length = 255

 Score =  131 bits (330), Expect = 2e-28
 Identities = 65/148 (43%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
 Frame = +1

Query: 76  RHRYTLNSRIMITATXXXXXXXXXXXXXHFYARYVLRRQAMRRQAIHQLAISTAAAQVNS 255
           R+ Y LN++IM+TA              H YARY LRR A R+  + +L I    A ++S
Sbjct: 49  RNPYDLNNKIMLTAIVSLSLVVILVIALHIYARYALRRHARRQAVLRRLGI---LAFIDS 105

Query: 256 SEQ----TRAGLDAAVIASLPIFIYKLDDQVSKDSQVDRDCAVCLSNLEEGEVARLLPNC 423
            +     +R+GLD  V+AS+P+ ++K   +    S    +CAVCLS + +GE AR+LPNC
Sbjct: 106 GDHHPPPSRSGLDPLVMASMPVVVFKHQSESPDPSGGGVECAVCLSAIVDGETARILPNC 165

Query: 424 KHIFHSKCVDAWLRAHSTCPICRTEAKP 507
           KH+FH +C+D W  +HSTCPICRTEA P
Sbjct: 166 KHVFHVECIDKWFGSHSTCPICRTEAAP 193


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